Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1877:A1879
Extra
PDB:
ATOM 1 O3' C A1876 89.008 -10.282 11.852 1.00 61.91 O
ATOM 2 P C A1877 89.200 -9.548 10.440 1.00 66.34 P
ATOM 3 OP1 C A1877 90.185 -8.450 10.651 1.00 55.82 O
ATOM 4 OP2 C A1877 87.851 -9.233 9.869 1.00 53.75 O
ATOM 5 O5' C A1877 89.860 -10.686 9.530 1.00 60.91 O
ATOM 6 C5' C A1877 91.039 -11.368 9.953 1.00 55.57 C
ATOM 7 C4' C A1877 91.554 -12.259 8.855 1.00 51.83 C
ATOM 8 O4' C A1877 90.641 -13.364 8.735 1.00 52.51 O
ATOM 9 C3' C A1877 91.689 -11.599 7.486 1.00 55.08 C
ATOM 10 O3' C A1877 92.884 -11.833 6.725 1.00 73.24 O
ATOM 11 C2' C A1877 90.528 -12.163 6.667 1.00 49.09 C
ATOM 12 O2' C A1877 91.029 -12.643 5.440 1.00 54.68 O
ATOM 13 C1' C A1877 90.093 -13.400 7.447 1.00 52.11 C
ATOM 14 N1 C A1877 88.627 -13.532 7.589 1.00 53.66 N
ATOM 15 C2 C A1877 88.018 -14.743 7.218 1.00 55.33 C
ATOM 16 O2 C A1877 88.720 -15.666 6.764 1.00 53.43 O
ATOM 17 N3 C A1877 86.683 -14.883 7.363 1.00 55.32 N
ATOM 18 C4 C A1877 85.956 -13.881 7.853 1.00 54.42 C
ATOM 19 N4 C A1877 84.641 -14.079 7.978 1.00 52.35 N
ATOM 20 C5 C A1877 86.545 -12.636 8.238 1.00 55.80 C
ATOM 21 C6 C A1877 87.870 -12.505 8.089 1.00 52.54 C
ATOM 22 P U A1878 94.201 -12.482 7.392 1.00 67.86 P
ATOM 23 OP1 U A1878 93.940 -13.948 7.385 1.00 77.97 O
ATOM 24 OP2 U A1878 94.599 -11.816 8.662 1.00 69.30 O
ATOM 25 O5' U A1878 95.327 -12.206 6.302 1.00 58.43 O
TER
ATOM 1 O3' U B1878 94.108 -14.626 3.384 1.00 78.49 O
ATOM 2 P G B1879 92.534 -14.661 3.049 1.00 58.82 P
ATOM 3 OP1 G B1879 92.211 -13.462 2.245 1.00 61.81 O
ATOM 4 OP2 G B1879 91.823 -14.910 4.327 1.00 59.74 O
ATOM 5 O5' G B1879 92.356 -15.944 2.114 1.00 58.81 O
ATOM 6 C5' G B1879 91.954 -17.206 2.673 1.00 62.90 C
ATOM 7 C4' G B1879 90.796 -17.792 1.891 1.00 57.49 C
ATOM 8 O4' G B1879 89.741 -16.806 1.887 1.00 50.76 O
ATOM 9 C3' G B1879 91.088 -18.125 0.429 1.00 55.27 C
ATOM 10 O3' G B1879 90.281 -19.229 0.017 1.00 46.00 O
ATOM 11 C2' G B1879 90.613 -16.872 -0.294 1.00 54.14 C
ATOM 12 O2' G B1879 90.195 -17.132 -1.611 1.00 55.62 O
ATOM 13 C1' G B1879 89.418 -16.474 0.565 1.00 54.23 C
ATOM 14 N9 G B1879 89.065 -15.066 0.518 1.00 56.59 N
ATOM 15 C8 G B1879 89.903 -13.982 0.435 1.00 58.57 C
ATOM 16 N7 G B1879 89.260 -12.849 0.355 1.00 55.88 N
ATOM 17 C5 G B1879 87.923 -13.210 0.399 1.00 55.67 C
ATOM 18 C6 G B1879 86.774 -12.421 0.311 1.00 59.58 C
ATOM 19 O6 G B1879 86.703 -11.202 0.151 1.00 58.51 O
ATOM 20 N1 G B1879 85.612 -13.186 0.400 1.00 63.20 N
ATOM 21 C2 G B1879 85.576 -14.552 0.536 1.00 62.19 C
ATOM 22 N2 G B1879 84.361 -15.111 0.605 1.00 59.46 N
ATOM 23 N3 G B1879 86.656 -15.307 0.599 1.00 57.21 N
ATOM 24 C4 G B1879 87.787 -14.572 0.523 1.00 54.09 C
ATOM 25 P C B1880 90.857 -20.728 0.088 1.00 50.39 P
ATOM 26 OP1 C B1880 89.844 -21.624 -0.482 1.00 53.39 O
ATOM 27 OP2 C B1880 91.321 -20.950 1.485 1.00 50.56 O
ATOM 28 O5' C B1880 92.083 -20.752 -0.935 1.00 51.52 O
TER
ATOM 2 P C A1877 89.200 -9.548 10.440 1.00 66.34 P
ATOM 3 OP1 C A1877 90.185 -8.450 10.651 1.00 55.82 O
ATOM 4 OP2 C A1877 87.851 -9.233 9.869 1.00 53.75 O
ATOM 5 O5' C A1877 89.860 -10.686 9.530 1.00 60.91 O
ATOM 6 C5' C A1877 91.039 -11.368 9.953 1.00 55.57 C
ATOM 7 C4' C A1877 91.554 -12.259 8.855 1.00 51.83 C
ATOM 8 O4' C A1877 90.641 -13.364 8.735 1.00 52.51 O
ATOM 9 C3' C A1877 91.689 -11.599 7.486 1.00 55.08 C
ATOM 10 O3' C A1877 92.884 -11.833 6.725 1.00 73.24 O
ATOM 11 C2' C A1877 90.528 -12.163 6.667 1.00 49.09 C
ATOM 12 O2' C A1877 91.029 -12.643 5.440 1.00 54.68 O
ATOM 13 C1' C A1877 90.093 -13.400 7.447 1.00 52.11 C
ATOM 14 N1 C A1877 88.627 -13.532 7.589 1.00 53.66 N
ATOM 15 C2 C A1877 88.018 -14.743 7.218 1.00 55.33 C
ATOM 16 O2 C A1877 88.720 -15.666 6.764 1.00 53.43 O
ATOM 17 N3 C A1877 86.683 -14.883 7.363 1.00 55.32 N
ATOM 18 C4 C A1877 85.956 -13.881 7.853 1.00 54.42 C
ATOM 19 N4 C A1877 84.641 -14.079 7.978 1.00 52.35 N
ATOM 20 C5 C A1877 86.545 -12.636 8.238 1.00 55.80 C
ATOM 21 C6 C A1877 87.870 -12.505 8.089 1.00 52.54 C
ATOM 22 P U A1878 94.201 -12.482 7.392 1.00 67.86 P
ATOM 23 OP1 U A1878 93.940 -13.948 7.385 1.00 77.97 O
ATOM 24 OP2 U A1878 94.599 -11.816 8.662 1.00 69.30 O
ATOM 25 O5' U A1878 95.327 -12.206 6.302 1.00 58.43 O
TER
ATOM 1 O3' U B1878 94.108 -14.626 3.384 1.00 78.49 O
ATOM 2 P G B1879 92.534 -14.661 3.049 1.00 58.82 P
ATOM 3 OP1 G B1879 92.211 -13.462 2.245 1.00 61.81 O
ATOM 4 OP2 G B1879 91.823 -14.910 4.327 1.00 59.74 O
ATOM 5 O5' G B1879 92.356 -15.944 2.114 1.00 58.81 O
ATOM 6 C5' G B1879 91.954 -17.206 2.673 1.00 62.90 C
ATOM 7 C4' G B1879 90.796 -17.792 1.891 1.00 57.49 C
ATOM 8 O4' G B1879 89.741 -16.806 1.887 1.00 50.76 O
ATOM 9 C3' G B1879 91.088 -18.125 0.429 1.00 55.27 C
ATOM 10 O3' G B1879 90.281 -19.229 0.017 1.00 46.00 O
ATOM 11 C2' G B1879 90.613 -16.872 -0.294 1.00 54.14 C
ATOM 12 O2' G B1879 90.195 -17.132 -1.611 1.00 55.62 O
ATOM 13 C1' G B1879 89.418 -16.474 0.565 1.00 54.23 C
ATOM 14 N9 G B1879 89.065 -15.066 0.518 1.00 56.59 N
ATOM 15 C8 G B1879 89.903 -13.982 0.435 1.00 58.57 C
ATOM 16 N7 G B1879 89.260 -12.849 0.355 1.00 55.88 N
ATOM 17 C5 G B1879 87.923 -13.210 0.399 1.00 55.67 C
ATOM 18 C6 G B1879 86.774 -12.421 0.311 1.00 59.58 C
ATOM 19 O6 G B1879 86.703 -11.202 0.151 1.00 58.51 O
ATOM 20 N1 G B1879 85.612 -13.186 0.400 1.00 63.20 N
ATOM 21 C2 G B1879 85.576 -14.552 0.536 1.00 62.19 C
ATOM 22 N2 G B1879 84.361 -15.111 0.605 1.00 59.46 N
ATOM 23 N3 G B1879 86.656 -15.307 0.599 1.00 57.21 N
ATOM 24 C4 G B1879 87.787 -14.572 0.523 1.00 54.09 C
ATOM 25 P C B1880 90.857 -20.728 0.088 1.00 50.39 P
ATOM 26 OP1 C B1880 89.844 -21.624 -0.482 1.00 53.39 O
ATOM 27 OP2 C B1880 91.321 -20.950 1.485 1.00 50.56 O
ATOM 28 O5' C B1880 92.083 -20.752 -0.935 1.00 51.52 O
TER
Atoms:
C2: (88.018,-14.743,7.218)
OP1: (90.185,-8.450,10.651)
OP2: (87.851,-9.233,9.869)
C4: (85.956,-13.881,7.853)
O5': (89.860,-10.686,9.530)
C3': (91.689,-11.599,7.486)
C1': (90.093,-13.400,7.447)
O4': (90.641,-13.364,8.735)
C5': (91.039,-11.368,9.953)
P: (89.200,-9.548,10.440)
O2: (88.720,-15.666,6.764)
C4': (91.554,-12.259,8.855)
C2': (90.528,-12.163,6.667)
O2': (91.029,-12.643,5.440)
N1: (88.627,-13.532,7.589)
N3: (86.683,-14.883,7.363)
N4: (84.641,-14.079,7.978)
C6: (87.870,-12.505,8.089)
C5: (86.545,-12.636,8.238)
O3': (92.884,-11.833,6.725)
OP1: (90.185,-8.450,10.651)
OP2: (87.851,-9.233,9.869)
C4: (85.956,-13.881,7.853)
O5': (89.860,-10.686,9.530)
C3': (91.689,-11.599,7.486)
C1': (90.093,-13.400,7.447)
O4': (90.641,-13.364,8.735)
C5': (91.039,-11.368,9.953)
P: (89.200,-9.548,10.440)
O2: (88.720,-15.666,6.764)
C4': (91.554,-12.259,8.855)
C2': (90.528,-12.163,6.667)
O2': (91.029,-12.643,5.440)
N1: (88.627,-13.532,7.589)
N3: (86.683,-14.883,7.363)
N4: (84.641,-14.079,7.978)
C6: (87.870,-12.505,8.089)
C5: (86.545,-12.636,8.238)
O3': (92.884,-11.833,6.725)
OP1: (92.211,-13.462,2.245)
OP2: (91.823,-14.910,4.327)
C3': (91.088,-18.125,0.429)
C1': (89.418,-16.474,0.565)
C5': (91.954,-17.206,2.673)
O6: (86.703,-11.202,0.151)
O4': (89.741,-16.806,1.887)
C8: (89.903,-13.982,0.435)
C2: (85.576,-14.552,0.536)
C6: (86.774,-12.421,0.311)
C5: (87.923,-13.210,0.399)
C4: (87.787,-14.572,0.523)
P: (92.534,-14.661,3.049)
C4': (90.796,-17.792,1.891)
C2': (90.613,-16.872,-0.294)
O2': (90.195,-17.132,-1.611)
N1: (85.612,-13.186,0.400)
N2: (84.361,-15.111,0.605)
N3: (86.656,-15.307,0.599)
N7: (89.260,-12.849,0.355)
N9: (89.065,-15.066,0.518)
O5': (92.356,-15.944,2.114)
O3': (90.281,-19.229,0.017)
OP2: (91.823,-14.910,4.327)
C3': (91.088,-18.125,0.429)
C1': (89.418,-16.474,0.565)
C5': (91.954,-17.206,2.673)
O6: (86.703,-11.202,0.151)
O4': (89.741,-16.806,1.887)
C8: (89.903,-13.982,0.435)
C2: (85.576,-14.552,0.536)
C6: (86.774,-12.421,0.311)
C5: (87.923,-13.210,0.399)
C4: (87.787,-14.572,0.523)
P: (92.534,-14.661,3.049)
C4': (90.796,-17.792,1.891)
C2': (90.613,-16.872,-0.294)
O2': (90.195,-17.132,-1.611)
N1: (85.612,-13.186,0.400)
N2: (84.361,-15.111,0.605)
N3: (86.656,-15.307,0.599)
N7: (89.260,-12.849,0.355)
N9: (89.065,-15.066,0.518)
O5': (92.356,-15.944,2.114)
O3': (90.281,-19.229,0.017)
Image (generated by PyMOL):