Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1955:A1957
Extra
PDB:
ATOM 1 O3' C A1954 -83.509 -11.343 -15.707 1.00 0.01 O
ATOM 2 P C A1955 -83.747 -10.498 -14.365 1.00 2.25 P
ATOM 3 OP1 C A1955 -84.647 -9.394 -14.705 1.00 2.25 O
ATOM 4 OP2 C A1955 -82.417 -10.173 -13.788 1.00 2.25 O
ATOM 5 O5' C A1955 -84.514 -11.538 -13.457 1.00 2.25 O
ATOM 6 C5' C A1955 -85.841 -11.920 -13.789 1.00 2.25 C
ATOM 7 C4' C A1955 -86.252 -13.168 -13.072 1.00 2.25 C
ATOM 8 O4' C A1955 -85.130 -14.077 -13.073 1.00 2.25 O
ATOM 9 C3' C A1955 -86.620 -12.964 -11.623 1.00 2.25 C
ATOM 10 O3' C A1955 -87.548 -13.969 -11.211 1.00 2.25 O
ATOM 11 C2' C A1955 -85.293 -13.173 -10.930 1.00 2.25 C
ATOM 12 O2' C A1955 -85.394 -13.519 -9.571 1.00 2.25 O
ATOM 13 C1' C A1955 -84.700 -14.299 -11.758 1.00 2.25 C
ATOM 14 N1 C A1955 -83.237 -14.326 -11.762 1.00 2.38 N
ATOM 15 C2 C A1955 -82.618 -15.538 -11.476 1.00 2.38 C
ATOM 16 O2 C A1955 -83.368 -16.504 -11.263 1.00 2.38 O
ATOM 17 N3 C A1955 -81.252 -15.594 -11.461 1.00 2.38 N
ATOM 18 C4 C A1955 -80.535 -14.471 -11.740 1.00 2.38 C
ATOM 19 N4 C A1955 -79.192 -14.517 -11.736 1.00 2.38 N
ATOM 20 C5 C A1955 -81.160 -13.219 -12.041 1.00 2.38 C
ATOM 21 C6 C A1955 -82.502 -13.197 -12.039 1.00 2.38 C
ATOM 22 P U A1956 -89.116 -13.626 -11.095 1.00 6.24 P
ATOM 23 OP1 U A1956 -89.441 -12.759 -12.245 1.00 6.24 O
ATOM 24 OP2 U A1956 -89.368 -13.124 -9.704 1.00 6.24 O
ATOM 25 O5' U A1956 -89.799 -15.052 -11.288 1.00 6.24 O
TER
ATOM 1 O3' U B1956 -88.353 -16.755 -8.149 1.00 6.24 O
ATOM 2 P G B1957 -86.940 -16.196 -7.706 1.00 0.44 P
ATOM 3 OP1 G B1957 -87.200 -14.999 -6.900 1.00 0.44 O
ATOM 4 OP2 G B1957 -86.134 -16.078 -8.943 1.00 0.44 O
ATOM 5 O5' G B1957 -86.346 -17.356 -6.788 1.00 0.44 O
ATOM 6 C5' G B1957 -85.523 -18.398 -7.350 1.00 0.44 C
ATOM 7 C4' G B1957 -84.650 -19.059 -6.301 1.00 0.44 C
ATOM 8 O4' G B1957 -83.570 -18.156 -5.957 1.00 0.44 O
ATOM 9 C3' G B1957 -85.350 -19.378 -4.985 1.00 0.44 C
ATOM 10 O3' G B1957 -84.656 -20.422 -4.314 1.00 0.44 O
ATOM 11 C2' G B1957 -85.163 -18.094 -4.200 1.00 0.44 C
ATOM 12 O2' G B1957 -85.216 -18.269 -2.805 1.00 0.44 O
ATOM 13 C1' G B1957 -83.768 -17.635 -4.649 1.00 0.44 C
ATOM 14 N9 G B1957 -83.618 -16.180 -4.739 1.00 0.64 N
ATOM 15 C8 G B1957 -84.588 -15.292 -5.087 1.00 0.64 C
ATOM 16 N7 G B1957 -84.183 -14.056 -5.137 1.00 0.64 N
ATOM 17 C5 G B1957 -82.846 -14.126 -4.843 1.00 0.64 C
ATOM 18 C6 G B1957 -81.890 -13.086 -4.759 1.00 0.64 C
ATOM 19 O6 G B1957 -82.054 -11.880 -4.937 1.00 0.64 O
ATOM 20 N1 G B1957 -80.651 -13.574 -4.401 1.00 0.64 N
ATOM 21 C2 G B1957 -80.391 -14.897 -4.182 1.00 0.64 C
ATOM 22 N2 G B1957 -79.143 -15.176 -3.861 1.00 0.64 N
ATOM 23 N3 G B1957 -81.256 -15.890 -4.269 1.00 0.64 N
ATOM 24 C4 G B1957 -82.480 -15.429 -4.593 1.00 0.64 C
ATOM 25 P C B1958 -85.014 -21.959 -4.565 1.00 0.01 P
ATOM 26 OP1 C B1958 -84.511 -22.700 -3.409 1.00 0.01 O
ATOM 27 OP2 C B1958 -84.508 -22.315 -5.894 1.00 0.01 O
ATOM 28 O5' C B1958 -86.599 -21.970 -4.565 1.00 0.01 O
TER
ATOM 2 P C A1955 -83.747 -10.498 -14.365 1.00 2.25 P
ATOM 3 OP1 C A1955 -84.647 -9.394 -14.705 1.00 2.25 O
ATOM 4 OP2 C A1955 -82.417 -10.173 -13.788 1.00 2.25 O
ATOM 5 O5' C A1955 -84.514 -11.538 -13.457 1.00 2.25 O
ATOM 6 C5' C A1955 -85.841 -11.920 -13.789 1.00 2.25 C
ATOM 7 C4' C A1955 -86.252 -13.168 -13.072 1.00 2.25 C
ATOM 8 O4' C A1955 -85.130 -14.077 -13.073 1.00 2.25 O
ATOM 9 C3' C A1955 -86.620 -12.964 -11.623 1.00 2.25 C
ATOM 10 O3' C A1955 -87.548 -13.969 -11.211 1.00 2.25 O
ATOM 11 C2' C A1955 -85.293 -13.173 -10.930 1.00 2.25 C
ATOM 12 O2' C A1955 -85.394 -13.519 -9.571 1.00 2.25 O
ATOM 13 C1' C A1955 -84.700 -14.299 -11.758 1.00 2.25 C
ATOM 14 N1 C A1955 -83.237 -14.326 -11.762 1.00 2.38 N
ATOM 15 C2 C A1955 -82.618 -15.538 -11.476 1.00 2.38 C
ATOM 16 O2 C A1955 -83.368 -16.504 -11.263 1.00 2.38 O
ATOM 17 N3 C A1955 -81.252 -15.594 -11.461 1.00 2.38 N
ATOM 18 C4 C A1955 -80.535 -14.471 -11.740 1.00 2.38 C
ATOM 19 N4 C A1955 -79.192 -14.517 -11.736 1.00 2.38 N
ATOM 20 C5 C A1955 -81.160 -13.219 -12.041 1.00 2.38 C
ATOM 21 C6 C A1955 -82.502 -13.197 -12.039 1.00 2.38 C
ATOM 22 P U A1956 -89.116 -13.626 -11.095 1.00 6.24 P
ATOM 23 OP1 U A1956 -89.441 -12.759 -12.245 1.00 6.24 O
ATOM 24 OP2 U A1956 -89.368 -13.124 -9.704 1.00 6.24 O
ATOM 25 O5' U A1956 -89.799 -15.052 -11.288 1.00 6.24 O
TER
ATOM 1 O3' U B1956 -88.353 -16.755 -8.149 1.00 6.24 O
ATOM 2 P G B1957 -86.940 -16.196 -7.706 1.00 0.44 P
ATOM 3 OP1 G B1957 -87.200 -14.999 -6.900 1.00 0.44 O
ATOM 4 OP2 G B1957 -86.134 -16.078 -8.943 1.00 0.44 O
ATOM 5 O5' G B1957 -86.346 -17.356 -6.788 1.00 0.44 O
ATOM 6 C5' G B1957 -85.523 -18.398 -7.350 1.00 0.44 C
ATOM 7 C4' G B1957 -84.650 -19.059 -6.301 1.00 0.44 C
ATOM 8 O4' G B1957 -83.570 -18.156 -5.957 1.00 0.44 O
ATOM 9 C3' G B1957 -85.350 -19.378 -4.985 1.00 0.44 C
ATOM 10 O3' G B1957 -84.656 -20.422 -4.314 1.00 0.44 O
ATOM 11 C2' G B1957 -85.163 -18.094 -4.200 1.00 0.44 C
ATOM 12 O2' G B1957 -85.216 -18.269 -2.805 1.00 0.44 O
ATOM 13 C1' G B1957 -83.768 -17.635 -4.649 1.00 0.44 C
ATOM 14 N9 G B1957 -83.618 -16.180 -4.739 1.00 0.64 N
ATOM 15 C8 G B1957 -84.588 -15.292 -5.087 1.00 0.64 C
ATOM 16 N7 G B1957 -84.183 -14.056 -5.137 1.00 0.64 N
ATOM 17 C5 G B1957 -82.846 -14.126 -4.843 1.00 0.64 C
ATOM 18 C6 G B1957 -81.890 -13.086 -4.759 1.00 0.64 C
ATOM 19 O6 G B1957 -82.054 -11.880 -4.937 1.00 0.64 O
ATOM 20 N1 G B1957 -80.651 -13.574 -4.401 1.00 0.64 N
ATOM 21 C2 G B1957 -80.391 -14.897 -4.182 1.00 0.64 C
ATOM 22 N2 G B1957 -79.143 -15.176 -3.861 1.00 0.64 N
ATOM 23 N3 G B1957 -81.256 -15.890 -4.269 1.00 0.64 N
ATOM 24 C4 G B1957 -82.480 -15.429 -4.593 1.00 0.64 C
ATOM 25 P C B1958 -85.014 -21.959 -4.565 1.00 0.01 P
ATOM 26 OP1 C B1958 -84.511 -22.700 -3.409 1.00 0.01 O
ATOM 27 OP2 C B1958 -84.508 -22.315 -5.894 1.00 0.01 O
ATOM 28 O5' C B1958 -86.599 -21.970 -4.565 1.00 0.01 O
TER
Atoms:
C2: (-82.618,-15.538,-11.476)
OP1: (-84.647,-9.394,-14.705)
OP2: (-82.417,-10.173,-13.788)
C4: (-80.535,-14.471,-11.740)
O5': (-84.514,-11.538,-13.457)
C3': (-86.620,-12.964,-11.623)
C1': (-84.700,-14.299,-11.758)
O4': (-85.130,-14.077,-13.073)
C5': (-85.841,-11.920,-13.789)
P: (-83.747,-10.498,-14.365)
O2: (-83.368,-16.504,-11.263)
C4': (-86.252,-13.168,-13.072)
C2': (-85.293,-13.173,-10.930)
O2': (-85.394,-13.519,-9.571)
N1: (-83.237,-14.326,-11.762)
N3: (-81.252,-15.594,-11.461)
N4: (-79.192,-14.517,-11.736)
C6: (-82.502,-13.197,-12.039)
C5: (-81.160,-13.219,-12.041)
O3': (-87.548,-13.969,-11.211)
OP1: (-84.647,-9.394,-14.705)
OP2: (-82.417,-10.173,-13.788)
C4: (-80.535,-14.471,-11.740)
O5': (-84.514,-11.538,-13.457)
C3': (-86.620,-12.964,-11.623)
C1': (-84.700,-14.299,-11.758)
O4': (-85.130,-14.077,-13.073)
C5': (-85.841,-11.920,-13.789)
P: (-83.747,-10.498,-14.365)
O2: (-83.368,-16.504,-11.263)
C4': (-86.252,-13.168,-13.072)
C2': (-85.293,-13.173,-10.930)
O2': (-85.394,-13.519,-9.571)
N1: (-83.237,-14.326,-11.762)
N3: (-81.252,-15.594,-11.461)
N4: (-79.192,-14.517,-11.736)
C6: (-82.502,-13.197,-12.039)
C5: (-81.160,-13.219,-12.041)
O3': (-87.548,-13.969,-11.211)
OP1: (-87.200,-14.999,-6.900)
OP2: (-86.134,-16.078,-8.943)
C3': (-85.350,-19.378,-4.985)
C1': (-83.768,-17.635,-4.649)
C5': (-85.523,-18.398,-7.350)
O6: (-82.054,-11.880,-4.937)
O4': (-83.570,-18.156,-5.957)
C8: (-84.588,-15.292,-5.087)
C2: (-80.391,-14.897,-4.182)
C6: (-81.890,-13.086,-4.759)
C5: (-82.846,-14.126,-4.843)
C4: (-82.480,-15.429,-4.593)
P: (-86.940,-16.196,-7.706)
C4': (-84.650,-19.059,-6.301)
C2': (-85.163,-18.094,-4.200)
O2': (-85.216,-18.269,-2.805)
N1: (-80.651,-13.574,-4.401)
N2: (-79.143,-15.176,-3.861)
N3: (-81.256,-15.890,-4.269)
N7: (-84.183,-14.056,-5.137)
N9: (-83.618,-16.180,-4.739)
O5': (-86.346,-17.356,-6.788)
O3': (-84.656,-20.422,-4.314)
OP2: (-86.134,-16.078,-8.943)
C3': (-85.350,-19.378,-4.985)
C1': (-83.768,-17.635,-4.649)
C5': (-85.523,-18.398,-7.350)
O6: (-82.054,-11.880,-4.937)
O4': (-83.570,-18.156,-5.957)
C8: (-84.588,-15.292,-5.087)
C2: (-80.391,-14.897,-4.182)
C6: (-81.890,-13.086,-4.759)
C5: (-82.846,-14.126,-4.843)
C4: (-82.480,-15.429,-4.593)
P: (-86.940,-16.196,-7.706)
C4': (-84.650,-19.059,-6.301)
C2': (-85.163,-18.094,-4.200)
O2': (-85.216,-18.269,-2.805)
N1: (-80.651,-13.574,-4.401)
N2: (-79.143,-15.176,-3.861)
N3: (-81.256,-15.890,-4.269)
N7: (-84.183,-14.056,-5.137)
N9: (-83.618,-16.180,-4.739)
O5': (-86.346,-17.356,-6.788)
O3': (-84.656,-20.422,-4.314)
Image (generated by PyMOL):