Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OIJ:A17:A18
Extra
PDB:
ATOM 1 O3' C A 16 -3.188 52.882 -40.484 1.00 49.52 O
ATOM 2 P G A 17 -3.550 53.603 -39.096 1.00 49.55 P
ATOM 3 OP1 G A 17 -2.257 53.861 -38.398 1.00 49.93 O
ATOM 4 OP2 G A 17 -4.603 52.797 -38.430 1.00 48.15 O
ATOM 5 O5' G A 17 -4.187 54.981 -39.594 1.00 46.71 O
ATOM 6 C5' G A 17 -4.326 56.117 -38.729 1.00 43.84 C
ATOM 7 C4' G A 17 -4.235 57.394 -39.534 1.00 40.97 C
ATOM 8 O4' G A 17 -4.827 57.200 -40.850 1.00 36.70 O
ATOM 9 C3' G A 17 -4.996 58.572 -38.945 1.00 38.96 C
ATOM 10 O3' G A 17 -4.280 59.240 -37.916 1.00 41.44 O
ATOM 11 C2' G A 17 -5.281 59.446 -40.163 1.00 38.69 C
ATOM 12 O2' G A 17 -4.217 60.312 -40.504 1.00 37.30 O
ATOM 13 C1' G A 17 -5.503 58.383 -41.245 1.00 38.86 C
ATOM 14 N9 G A 17 -6.904 58.042 -41.457 1.00 37.67 N
ATOM 15 C8 G A 17 -7.503 56.820 -41.260 1.00 40.53 C
ATOM 16 N7 G A 17 -8.774 56.816 -41.571 1.00 39.40 N
ATOM 17 C5 G A 17 -9.028 58.113 -41.992 1.00 36.05 C
ATOM 18 C6 G A 17 -10.220 58.710 -42.437 1.00 36.51 C
ATOM 19 O6 G A 17 -11.339 58.203 -42.553 1.00 32.19 O
ATOM 20 N1 G A 17 -10.031 60.049 -42.764 1.00 37.82 N
ATOM 21 C2 G A 17 -8.854 60.732 -42.664 1.00 33.95 C
ATOM 22 N2 G A 17 -8.883 62.011 -43.053 1.00 34.83 N
ATOM 23 N3 G A 17 -7.729 60.197 -42.227 1.00 36.73 N
ATOM 24 C4 G A 17 -7.886 58.887 -41.917 1.00 37.76 C
ATOM 25 P G A 18 -5.058 59.687 -36.595 1.00 41.34 P
ATOM 26 OP1 G A 18 -4.085 60.175 -35.595 1.00 41.43 O
ATOM 27 OP2 G A 18 -5.985 58.569 -36.247 1.00 37.51 O
ATOM 28 O5' G A 18 -5.944 60.917 -37.092 1.00 38.87 O
TER
ATOM 1 O3' G B 17 -4.280 59.240 -37.916 1.00 41.44 O
ATOM 2 P G B 18 -5.058 59.687 -36.595 1.00 41.34 P
ATOM 3 OP1 G B 18 -4.085 60.175 -35.595 1.00 41.43 O
ATOM 4 OP2 G B 18 -5.985 58.569 -36.247 1.00 37.51 O
ATOM 5 O5' G B 18 -5.944 60.917 -37.092 1.00 38.87 O
ATOM 6 C5' G B 18 -5.335 62.033 -37.768 1.00 35.77 C
ATOM 7 C4' G B 18 -6.384 63.030 -38.173 1.00 35.60 C
ATOM 8 O4' G B 18 -7.115 62.534 -39.320 1.00 34.99 O
ATOM 9 C3' G B 18 -7.454 63.272 -37.129 1.00 36.27 C
ATOM 10 O3' G B 18 -7.006 64.187 -36.137 1.00 37.52 O
ATOM 11 C2' G B 18 -8.606 63.795 -37.980 1.00 35.72 C
ATOM 12 O2' G B 18 -8.449 65.156 -38.348 1.00 31.78 O
ATOM 13 C1' G B 18 -8.471 62.925 -39.232 1.00 34.45 C
ATOM 14 N9 G B 18 -9.285 61.713 -39.192 1.00 34.65 N
ATOM 15 C8 G B 18 -8.901 60.465 -38.759 1.00 35.66 C
ATOM 16 N7 G B 18 -9.861 59.579 -38.834 1.00 35.09 N
ATOM 17 C5 G B 18 -10.939 60.283 -39.353 1.00 34.14 C
ATOM 18 C6 G B 18 -12.259 59.859 -39.640 1.00 33.77 C
ATOM 19 O6 G B 18 -12.753 58.740 -39.500 1.00 33.26 O
ATOM 20 N1 G B 18 -13.039 60.896 -40.127 1.00 35.97 N
ATOM 21 C2 G B 18 -12.618 62.182 -40.313 1.00 36.96 C
ATOM 22 N2 G B 18 -13.546 63.036 -40.762 1.00 37.61 N
ATOM 23 N3 G B 18 -11.381 62.600 -40.064 1.00 35.83 N
ATOM 24 C4 G B 18 -10.602 61.599 -39.583 1.00 34.41 C
ATOM 25 P C B 19 -7.506 64.023 -34.619 1.00 38.27 P
ATOM 26 OP1 C B 19 -6.722 64.947 -33.762 1.00 36.69 O
ATOM 27 OP2 C B 19 -7.543 62.573 -34.292 1.00 36.98 O
ATOM 28 O5' C B 19 -9.001 64.554 -34.686 1.00 36.37 O
TER
ATOM 2 P G A 17 -3.550 53.603 -39.096 1.00 49.55 P
ATOM 3 OP1 G A 17 -2.257 53.861 -38.398 1.00 49.93 O
ATOM 4 OP2 G A 17 -4.603 52.797 -38.430 1.00 48.15 O
ATOM 5 O5' G A 17 -4.187 54.981 -39.594 1.00 46.71 O
ATOM 6 C5' G A 17 -4.326 56.117 -38.729 1.00 43.84 C
ATOM 7 C4' G A 17 -4.235 57.394 -39.534 1.00 40.97 C
ATOM 8 O4' G A 17 -4.827 57.200 -40.850 1.00 36.70 O
ATOM 9 C3' G A 17 -4.996 58.572 -38.945 1.00 38.96 C
ATOM 10 O3' G A 17 -4.280 59.240 -37.916 1.00 41.44 O
ATOM 11 C2' G A 17 -5.281 59.446 -40.163 1.00 38.69 C
ATOM 12 O2' G A 17 -4.217 60.312 -40.504 1.00 37.30 O
ATOM 13 C1' G A 17 -5.503 58.383 -41.245 1.00 38.86 C
ATOM 14 N9 G A 17 -6.904 58.042 -41.457 1.00 37.67 N
ATOM 15 C8 G A 17 -7.503 56.820 -41.260 1.00 40.53 C
ATOM 16 N7 G A 17 -8.774 56.816 -41.571 1.00 39.40 N
ATOM 17 C5 G A 17 -9.028 58.113 -41.992 1.00 36.05 C
ATOM 18 C6 G A 17 -10.220 58.710 -42.437 1.00 36.51 C
ATOM 19 O6 G A 17 -11.339 58.203 -42.553 1.00 32.19 O
ATOM 20 N1 G A 17 -10.031 60.049 -42.764 1.00 37.82 N
ATOM 21 C2 G A 17 -8.854 60.732 -42.664 1.00 33.95 C
ATOM 22 N2 G A 17 -8.883 62.011 -43.053 1.00 34.83 N
ATOM 23 N3 G A 17 -7.729 60.197 -42.227 1.00 36.73 N
ATOM 24 C4 G A 17 -7.886 58.887 -41.917 1.00 37.76 C
ATOM 25 P G A 18 -5.058 59.687 -36.595 1.00 41.34 P
ATOM 26 OP1 G A 18 -4.085 60.175 -35.595 1.00 41.43 O
ATOM 27 OP2 G A 18 -5.985 58.569 -36.247 1.00 37.51 O
ATOM 28 O5' G A 18 -5.944 60.917 -37.092 1.00 38.87 O
TER
ATOM 1 O3' G B 17 -4.280 59.240 -37.916 1.00 41.44 O
ATOM 2 P G B 18 -5.058 59.687 -36.595 1.00 41.34 P
ATOM 3 OP1 G B 18 -4.085 60.175 -35.595 1.00 41.43 O
ATOM 4 OP2 G B 18 -5.985 58.569 -36.247 1.00 37.51 O
ATOM 5 O5' G B 18 -5.944 60.917 -37.092 1.00 38.87 O
ATOM 6 C5' G B 18 -5.335 62.033 -37.768 1.00 35.77 C
ATOM 7 C4' G B 18 -6.384 63.030 -38.173 1.00 35.60 C
ATOM 8 O4' G B 18 -7.115 62.534 -39.320 1.00 34.99 O
ATOM 9 C3' G B 18 -7.454 63.272 -37.129 1.00 36.27 C
ATOM 10 O3' G B 18 -7.006 64.187 -36.137 1.00 37.52 O
ATOM 11 C2' G B 18 -8.606 63.795 -37.980 1.00 35.72 C
ATOM 12 O2' G B 18 -8.449 65.156 -38.348 1.00 31.78 O
ATOM 13 C1' G B 18 -8.471 62.925 -39.232 1.00 34.45 C
ATOM 14 N9 G B 18 -9.285 61.713 -39.192 1.00 34.65 N
ATOM 15 C8 G B 18 -8.901 60.465 -38.759 1.00 35.66 C
ATOM 16 N7 G B 18 -9.861 59.579 -38.834 1.00 35.09 N
ATOM 17 C5 G B 18 -10.939 60.283 -39.353 1.00 34.14 C
ATOM 18 C6 G B 18 -12.259 59.859 -39.640 1.00 33.77 C
ATOM 19 O6 G B 18 -12.753 58.740 -39.500 1.00 33.26 O
ATOM 20 N1 G B 18 -13.039 60.896 -40.127 1.00 35.97 N
ATOM 21 C2 G B 18 -12.618 62.182 -40.313 1.00 36.96 C
ATOM 22 N2 G B 18 -13.546 63.036 -40.762 1.00 37.61 N
ATOM 23 N3 G B 18 -11.381 62.600 -40.064 1.00 35.83 N
ATOM 24 C4 G B 18 -10.602 61.599 -39.583 1.00 34.41 C
ATOM 25 P C B 19 -7.506 64.023 -34.619 1.00 38.27 P
ATOM 26 OP1 C B 19 -6.722 64.947 -33.762 1.00 36.69 O
ATOM 27 OP2 C B 19 -7.543 62.573 -34.292 1.00 36.98 O
ATOM 28 O5' C B 19 -9.001 64.554 -34.686 1.00 36.37 O
TER
Atoms:
OP1: (-2.257,53.861,-38.398)
OP2: (-4.603,52.797,-38.430)
C3': (-4.996,58.572,-38.945)
C1': (-5.503,58.383,-41.245)
C5': (-4.326,56.117,-38.729)
O6: (-11.339,58.203,-42.553)
O4': (-4.827,57.200,-40.850)
C8: (-7.503,56.820,-41.260)
C2: (-8.854,60.732,-42.664)
C6: (-10.220,58.710,-42.437)
C5: (-9.028,58.113,-41.992)
C4: (-7.886,58.887,-41.917)
P: (-3.550,53.603,-39.096)
C4': (-4.235,57.394,-39.534)
C2': (-5.281,59.446,-40.163)
O2': (-4.217,60.312,-40.504)
N1: (-10.031,60.049,-42.764)
N2: (-8.883,62.011,-43.053)
N3: (-7.729,60.197,-42.227)
N7: (-8.774,56.816,-41.571)
N9: (-6.904,58.042,-41.457)
O5': (-4.187,54.981,-39.594)
O3': (-4.280,59.240,-37.916)
OP2: (-4.603,52.797,-38.430)
C3': (-4.996,58.572,-38.945)
C1': (-5.503,58.383,-41.245)
C5': (-4.326,56.117,-38.729)
O6: (-11.339,58.203,-42.553)
O4': (-4.827,57.200,-40.850)
C8: (-7.503,56.820,-41.260)
C2: (-8.854,60.732,-42.664)
C6: (-10.220,58.710,-42.437)
C5: (-9.028,58.113,-41.992)
C4: (-7.886,58.887,-41.917)
P: (-3.550,53.603,-39.096)
C4': (-4.235,57.394,-39.534)
C2': (-5.281,59.446,-40.163)
O2': (-4.217,60.312,-40.504)
N1: (-10.031,60.049,-42.764)
N2: (-8.883,62.011,-43.053)
N3: (-7.729,60.197,-42.227)
N7: (-8.774,56.816,-41.571)
N9: (-6.904,58.042,-41.457)
O5': (-4.187,54.981,-39.594)
O3': (-4.280,59.240,-37.916)
OP1: (-4.085,60.175,-35.595)
OP2: (-5.985,58.569,-36.247)
C3': (-7.454,63.272,-37.129)
C1': (-8.471,62.925,-39.232)
C5': (-5.335,62.033,-37.768)
O6: (-12.753,58.740,-39.500)
O4': (-7.115,62.534,-39.320)
C8: (-8.901,60.465,-38.759)
C2: (-12.618,62.182,-40.313)
C6: (-12.259,59.859,-39.640)
C5: (-10.939,60.283,-39.353)
C4: (-10.602,61.599,-39.583)
P: (-5.058,59.687,-36.595)
C4': (-6.384,63.030,-38.173)
C2': (-8.606,63.795,-37.980)
O2': (-8.449,65.156,-38.348)
N1: (-13.039,60.896,-40.127)
N2: (-13.546,63.036,-40.762)
N3: (-11.381,62.600,-40.064)
N7: (-9.861,59.579,-38.834)
N9: (-9.285,61.713,-39.192)
O5': (-5.944,60.917,-37.092)
O3': (-7.006,64.187,-36.137)
OP2: (-5.985,58.569,-36.247)
C3': (-7.454,63.272,-37.129)
C1': (-8.471,62.925,-39.232)
C5': (-5.335,62.033,-37.768)
O6: (-12.753,58.740,-39.500)
O4': (-7.115,62.534,-39.320)
C8: (-8.901,60.465,-38.759)
C2: (-12.618,62.182,-40.313)
C6: (-12.259,59.859,-39.640)
C5: (-10.939,60.283,-39.353)
C4: (-10.602,61.599,-39.583)
P: (-5.058,59.687,-36.595)
C4': (-6.384,63.030,-38.173)
C2': (-8.606,63.795,-37.980)
O2': (-8.449,65.156,-38.348)
N1: (-13.039,60.896,-40.127)
N2: (-13.546,63.036,-40.762)
N3: (-11.381,62.600,-40.064)
N7: (-9.861,59.579,-38.834)
N9: (-9.285,61.713,-39.192)
O5': (-5.944,60.917,-37.092)
O3': (-7.006,64.187,-36.137)
Image (generated by PyMOL):