Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A22:A444
Extra
PDB:
ATOM 1 O3' C A 21 38.786 139.530 44.236 1.00 53.35 O
ATOM 2 P G A 22 39.708 138.362 43.672 1.00 52.27 P
ATOM 3 OP1 G A 22 40.767 138.902 42.792 1.00 51.72 O
ATOM 4 OP2 G A 22 38.767 137.329 43.155 1.00 51.64 O
ATOM 5 O5' G A 22 40.411 137.831 44.990 1.00 52.07 O
ATOM 6 C5' G A 22 41.310 138.665 45.728 1.00 49.72 C
ATOM 7 C4' G A 22 41.850 137.913 46.921 1.00 48.86 C
ATOM 8 O4' G A 22 40.753 137.491 47.774 1.00 50.37 O
ATOM 9 C3' G A 22 42.570 136.624 46.577 1.00 48.08 C
ATOM 10 O3' G A 22 43.919 136.925 46.225 1.00 44.46 O
ATOM 11 C2' G A 22 42.427 135.807 47.859 1.00 49.50 C
ATOM 12 O2' G A 22 43.320 136.219 48.864 1.00 52.38 O
ATOM 13 C1' G A 22 41.023 136.200 48.316 1.00 51.06 C
ATOM 14 N9 G A 22 40.012 135.265 47.831 1.00 53.67 N
ATOM 15 C8 G A 22 39.281 135.369 46.673 1.00 53.82 C
ATOM 16 N7 G A 22 38.507 134.342 46.459 1.00 54.57 N
ATOM 17 C5 G A 22 38.725 133.514 47.552 1.00 54.85 C
ATOM 18 C6 G A 22 38.184 132.245 47.861 1.00 54.74 C
ATOM 19 O6 G A 22 37.369 131.569 47.219 1.00 54.34 O
ATOM 20 N1 G A 22 38.691 131.757 49.056 1.00 55.47 N
ATOM 21 C2 G A 22 39.599 132.403 49.855 1.00 55.26 C
ATOM 22 N2 G A 22 39.995 131.752 50.953 1.00 56.64 N
ATOM 23 N3 G A 22 40.097 133.595 49.589 1.00 55.33 N
ATOM 24 C4 G A 22 39.631 134.083 48.423 1.00 54.45 C
ATOM 25 P G A 23 44.886 135.771 45.661 1.00 43.69 P
ATOM 26 OP1 G A 23 46.186 136.402 45.347 1.00 42.78 O
ATOM 27 OP2 G A 23 44.167 135.015 44.611 1.00 41.38 O
ATOM 28 O5' G A 23 45.103 134.824 46.920 1.00 43.45 O
TER
ATOM 1 O3' A B 443 42.183 126.914 58.400 1.00 31.47 O
ATOM 2 P G B 444 43.601 126.679 57.738 1.00 30.38 P
ATOM 3 OP1 G B 444 43.850 125.225 57.907 1.00 29.84 O
ATOM 4 OP2 G B 444 44.515 127.638 58.356 1.00 31.22 O
ATOM 5 O5' G B 444 43.411 127.141 56.220 1.00 30.39 O
ATOM 6 C5' G B 444 42.447 126.524 55.336 1.00 31.29 C
ATOM 7 C4' G B 444 42.353 127.284 54.020 1.00 32.28 C
ATOM 8 O4' G B 444 41.592 128.504 54.219 1.00 35.92 O
ATOM 9 C3' G B 444 43.644 127.768 53.384 1.00 31.92 C
ATOM 10 O3' G B 444 44.346 126.777 52.649 1.00 30.15 O
ATOM 11 C2' G B 444 43.142 128.873 52.474 1.00 33.56 C
ATOM 12 O2' G B 444 42.527 128.340 51.321 1.00 35.12 O
ATOM 13 C1' G B 444 42.074 129.521 53.358 1.00 35.43 C
ATOM 14 N9 G B 444 42.595 130.606 54.188 1.00 37.62 N
ATOM 15 C8 G B 444 43.030 130.519 55.493 1.00 38.99 C
ATOM 16 N7 G B 444 43.491 131.645 55.957 1.00 37.97 N
ATOM 17 C5 G B 444 43.356 132.528 54.899 1.00 39.56 C
ATOM 18 C6 G B 444 43.716 133.885 54.794 1.00 41.01 C
ATOM 19 O6 G B 444 44.272 134.596 55.633 1.00 41.54 O
ATOM 20 N1 G B 444 43.376 134.414 53.547 1.00 42.07 N
ATOM 21 C2 G B 444 42.779 133.720 52.531 1.00 39.95 C
ATOM 22 N2 G B 444 42.523 134.423 51.429 1.00 40.78 N
ATOM 23 N3 G B 444 42.460 132.441 52.604 1.00 38.97 N
ATOM 24 C4 G B 444 42.776 131.910 53.810 1.00 38.85 C
ATOM 25 P U B 445 45.941 126.660 52.812 1.00 28.64 P
ATOM 26 OP1 U B 445 46.432 125.573 51.933 1.00 26.04 O
ATOM 27 OP2 U B 445 46.137 126.554 54.269 1.00 26.73 O
ATOM 28 O5' U B 445 46.496 128.058 52.262 1.00 29.13 O
TER
ATOM 2 P G A 22 39.708 138.362 43.672 1.00 52.27 P
ATOM 3 OP1 G A 22 40.767 138.902 42.792 1.00 51.72 O
ATOM 4 OP2 G A 22 38.767 137.329 43.155 1.00 51.64 O
ATOM 5 O5' G A 22 40.411 137.831 44.990 1.00 52.07 O
ATOM 6 C5' G A 22 41.310 138.665 45.728 1.00 49.72 C
ATOM 7 C4' G A 22 41.850 137.913 46.921 1.00 48.86 C
ATOM 8 O4' G A 22 40.753 137.491 47.774 1.00 50.37 O
ATOM 9 C3' G A 22 42.570 136.624 46.577 1.00 48.08 C
ATOM 10 O3' G A 22 43.919 136.925 46.225 1.00 44.46 O
ATOM 11 C2' G A 22 42.427 135.807 47.859 1.00 49.50 C
ATOM 12 O2' G A 22 43.320 136.219 48.864 1.00 52.38 O
ATOM 13 C1' G A 22 41.023 136.200 48.316 1.00 51.06 C
ATOM 14 N9 G A 22 40.012 135.265 47.831 1.00 53.67 N
ATOM 15 C8 G A 22 39.281 135.369 46.673 1.00 53.82 C
ATOM 16 N7 G A 22 38.507 134.342 46.459 1.00 54.57 N
ATOM 17 C5 G A 22 38.725 133.514 47.552 1.00 54.85 C
ATOM 18 C6 G A 22 38.184 132.245 47.861 1.00 54.74 C
ATOM 19 O6 G A 22 37.369 131.569 47.219 1.00 54.34 O
ATOM 20 N1 G A 22 38.691 131.757 49.056 1.00 55.47 N
ATOM 21 C2 G A 22 39.599 132.403 49.855 1.00 55.26 C
ATOM 22 N2 G A 22 39.995 131.752 50.953 1.00 56.64 N
ATOM 23 N3 G A 22 40.097 133.595 49.589 1.00 55.33 N
ATOM 24 C4 G A 22 39.631 134.083 48.423 1.00 54.45 C
ATOM 25 P G A 23 44.886 135.771 45.661 1.00 43.69 P
ATOM 26 OP1 G A 23 46.186 136.402 45.347 1.00 42.78 O
ATOM 27 OP2 G A 23 44.167 135.015 44.611 1.00 41.38 O
ATOM 28 O5' G A 23 45.103 134.824 46.920 1.00 43.45 O
TER
ATOM 1 O3' A B 443 42.183 126.914 58.400 1.00 31.47 O
ATOM 2 P G B 444 43.601 126.679 57.738 1.00 30.38 P
ATOM 3 OP1 G B 444 43.850 125.225 57.907 1.00 29.84 O
ATOM 4 OP2 G B 444 44.515 127.638 58.356 1.00 31.22 O
ATOM 5 O5' G B 444 43.411 127.141 56.220 1.00 30.39 O
ATOM 6 C5' G B 444 42.447 126.524 55.336 1.00 31.29 C
ATOM 7 C4' G B 444 42.353 127.284 54.020 1.00 32.28 C
ATOM 8 O4' G B 444 41.592 128.504 54.219 1.00 35.92 O
ATOM 9 C3' G B 444 43.644 127.768 53.384 1.00 31.92 C
ATOM 10 O3' G B 444 44.346 126.777 52.649 1.00 30.15 O
ATOM 11 C2' G B 444 43.142 128.873 52.474 1.00 33.56 C
ATOM 12 O2' G B 444 42.527 128.340 51.321 1.00 35.12 O
ATOM 13 C1' G B 444 42.074 129.521 53.358 1.00 35.43 C
ATOM 14 N9 G B 444 42.595 130.606 54.188 1.00 37.62 N
ATOM 15 C8 G B 444 43.030 130.519 55.493 1.00 38.99 C
ATOM 16 N7 G B 444 43.491 131.645 55.957 1.00 37.97 N
ATOM 17 C5 G B 444 43.356 132.528 54.899 1.00 39.56 C
ATOM 18 C6 G B 444 43.716 133.885 54.794 1.00 41.01 C
ATOM 19 O6 G B 444 44.272 134.596 55.633 1.00 41.54 O
ATOM 20 N1 G B 444 43.376 134.414 53.547 1.00 42.07 N
ATOM 21 C2 G B 444 42.779 133.720 52.531 1.00 39.95 C
ATOM 22 N2 G B 444 42.523 134.423 51.429 1.00 40.78 N
ATOM 23 N3 G B 444 42.460 132.441 52.604 1.00 38.97 N
ATOM 24 C4 G B 444 42.776 131.910 53.810 1.00 38.85 C
ATOM 25 P U B 445 45.941 126.660 52.812 1.00 28.64 P
ATOM 26 OP1 U B 445 46.432 125.573 51.933 1.00 26.04 O
ATOM 27 OP2 U B 445 46.137 126.554 54.269 1.00 26.73 O
ATOM 28 O5' U B 445 46.496 128.058 52.262 1.00 29.13 O
TER
Atoms:
OP1: (40.767,138.902,42.792)
OP2: (38.767,137.329,43.155)
C3': (42.570,136.624,46.577)
C1': (41.023,136.200,48.316)
C5': (41.310,138.665,45.728)
O6: (37.369,131.569,47.219)
O4': (40.753,137.491,47.774)
C8: (39.281,135.369,46.673)
C2: (39.599,132.403,49.855)
C6: (38.184,132.245,47.861)
C5: (38.725,133.514,47.552)
C4: (39.631,134.083,48.423)
P: (39.708,138.362,43.672)
C4': (41.850,137.913,46.921)
C2': (42.427,135.807,47.859)
O2': (43.320,136.219,48.864)
N1: (38.691,131.757,49.056)
N2: (39.995,131.752,50.953)
N3: (40.097,133.595,49.589)
N7: (38.507,134.342,46.459)
N9: (40.012,135.265,47.831)
O5': (40.411,137.831,44.990)
O3': (43.919,136.925,46.225)
OP2: (38.767,137.329,43.155)
C3': (42.570,136.624,46.577)
C1': (41.023,136.200,48.316)
C5': (41.310,138.665,45.728)
O6: (37.369,131.569,47.219)
O4': (40.753,137.491,47.774)
C8: (39.281,135.369,46.673)
C2: (39.599,132.403,49.855)
C6: (38.184,132.245,47.861)
C5: (38.725,133.514,47.552)
C4: (39.631,134.083,48.423)
P: (39.708,138.362,43.672)
C4': (41.850,137.913,46.921)
C2': (42.427,135.807,47.859)
O2': (43.320,136.219,48.864)
N1: (38.691,131.757,49.056)
N2: (39.995,131.752,50.953)
N3: (40.097,133.595,49.589)
N7: (38.507,134.342,46.459)
N9: (40.012,135.265,47.831)
O5': (40.411,137.831,44.990)
O3': (43.919,136.925,46.225)
OP1: (43.850,125.225,57.907)
OP2: (44.515,127.638,58.356)
C3': (43.644,127.768,53.384)
C1': (42.074,129.521,53.358)
C5': (42.447,126.524,55.336)
O6: (44.272,134.596,55.633)
O4': (41.592,128.504,54.219)
C8: (43.030,130.519,55.493)
C2: (42.779,133.720,52.531)
C6: (43.716,133.885,54.794)
C5: (43.356,132.528,54.899)
C4: (42.776,131.910,53.810)
P: (43.601,126.679,57.738)
C4': (42.353,127.284,54.020)
C2': (43.142,128.873,52.474)
O2': (42.527,128.340,51.321)
N1: (43.376,134.414,53.547)
N2: (42.523,134.423,51.429)
N3: (42.460,132.441,52.604)
N7: (43.491,131.645,55.957)
N9: (42.595,130.606,54.188)
O5': (43.411,127.141,56.220)
O3': (44.346,126.777,52.649)
OP2: (44.515,127.638,58.356)
C3': (43.644,127.768,53.384)
C1': (42.074,129.521,53.358)
C5': (42.447,126.524,55.336)
O6: (44.272,134.596,55.633)
O4': (41.592,128.504,54.219)
C8: (43.030,130.519,55.493)
C2: (42.779,133.720,52.531)
C6: (43.716,133.885,54.794)
C5: (43.356,132.528,54.899)
C4: (42.776,131.910,53.810)
P: (43.601,126.679,57.738)
C4': (42.353,127.284,54.020)
C2': (43.142,128.873,52.474)
O2': (42.527,128.340,51.321)
N1: (43.376,134.414,53.547)
N2: (42.523,134.423,51.429)
N3: (42.460,132.441,52.604)
N7: (43.491,131.645,55.957)
N9: (42.595,130.606,54.188)
O5': (43.411,127.141,56.220)
O3': (44.346,126.777,52.649)
Image (generated by PyMOL):