ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A22:A444

Extra

PDB:
ATOM 1 O3' C A 21 38.511 139.428 43.855 1.00 39.02 O
ATOM 2 P G A 22 39.500 138.275 43.357 1.00 33.83 P
ATOM 3 OP1 G A 22 40.549 138.864 42.489 1.00 34.97 O
ATOM 4 OP2 G A 22 38.680 137.147 42.858 1.00 34.07 O
ATOM 5 O5' G A 22 40.203 137.790 44.690 1.00 31.29 O
ATOM 6 C5' G A 22 41.023 138.669 45.461 1.00 29.99 C
ATOM 7 C4' G A 22 41.568 137.927 46.646 1.00 28.52 C
ATOM 8 O4' G A 22 40.459 137.493 47.476 1.00 30.25 O
ATOM 9 C3' G A 22 42.288 136.641 46.286 1.00 28.22 C
ATOM 10 O3' G A 22 43.636 136.930 45.882 1.00 26.74 O
ATOM 11 C2' G A 22 42.157 135.846 47.581 1.00 29.49 C
ATOM 12 O2' G A 22 43.038 136.348 48.562 1.00 30.38 O
ATOM 13 C1' G A 22 40.729 136.203 48.014 1.00 31.01 C
ATOM 14 N9 G A 22 39.712 135.265 47.529 1.00 34.34 N
ATOM 15 C8 G A 22 38.942 135.380 46.397 1.00 34.60 C
ATOM 16 N7 G A 22 38.196 134.332 46.172 1.00 34.57 N
ATOM 17 C5 G A 22 38.469 133.481 47.233 1.00 35.97 C
ATOM 18 C6 G A 22 37.988 132.171 47.522 1.00 35.88 C
ATOM 19 O6 G A 22 37.213 131.461 46.870 1.00 37.51 O
ATOM 20 N1 G A 22 38.522 131.685 48.707 1.00 37.22 N
ATOM 21 C2 G A 22 39.411 132.351 49.511 1.00 37.74 C
ATOM 22 N2 G A 22 39.818 131.715 50.617 1.00 38.14 N
ATOM 23 N3 G A 22 39.875 133.558 49.250 1.00 38.75 N
ATOM 24 C4 G A 22 39.374 134.058 48.100 1.00 36.44 C
ATOM 25 P G A 23 44.577 135.760 45.309 1.00 28.67 P
ATOM 26 OP1 G A 23 45.943 136.289 45.079 1.00 26.95 O
ATOM 27 OP2 G A 23 43.862 135.077 44.206 1.00 26.59 O
ATOM 28 O5' G A 23 44.679 134.777 46.555 1.00 30.58 O
TER

ATOM 1 O3' A B 443 41.921 126.855 57.943 1.00 20.01 O
ATOM 2 P G B 444 43.335 126.581 57.261 1.00 21.90 P
ATOM 3 OP1 G B 444 43.517 125.105 57.260 1.00 20.77 O
ATOM 4 OP2 G B 444 44.335 127.431 57.917 1.00 21.60 O
ATOM 5 O5' G B 444 43.146 127.098 55.770 1.00 20.71 O
ATOM 6 C5' G B 444 42.307 126.393 54.858 1.00 18.94 C
ATOM 7 C4' G B 444 42.109 127.188 53.594 1.00 18.18 C
ATOM 8 O4' G B 444 41.350 128.399 53.877 1.00 19.57 O
ATOM 9 C3' G B 444 43.370 127.700 52.928 1.00 16.43 C
ATOM 10 O3' G B 444 44.058 126.721 52.177 1.00 14.99 O
ATOM 11 C2' G B 444 42.824 128.826 52.069 1.00 19.11 C
ATOM 12 O2' G B 444 42.183 128.350 50.906 1.00 22.11 O
ATOM 13 C1' G B 444 41.772 129.433 53.001 1.00 20.94 C
ATOM 14 N9 G B 444 42.361 130.504 53.796 1.00 24.92 N
ATOM 15 C8 G B 444 42.848 130.413 55.082 1.00 26.97 C
ATOM 16 N7 G B 444 43.371 131.528 55.517 1.00 25.91 N
ATOM 17 C5 G B 444 43.216 132.413 54.464 1.00 27.41 C
ATOM 18 C6 G B 444 43.608 133.765 54.349 1.00 29.02 C
ATOM 19 O6 G B 444 44.207 134.463 55.174 1.00 27.08 O
ATOM 20 N1 G B 444 43.243 134.303 53.114 1.00 30.55 N
ATOM 21 C2 G B 444 42.588 133.625 52.116 1.00 28.34 C
ATOM 22 N2 G B 444 42.310 134.337 51.026 1.00 27.66 N
ATOM 23 N3 G B 444 42.232 132.345 52.199 1.00 27.01 N
ATOM 24 C4 G B 444 42.575 131.805 53.396 1.00 26.38 C
ATOM 25 P U B 445 45.646 126.576 52.350 1.00 18.34 P
ATOM 26 OP1 U B 445 46.129 125.435 51.543 1.00 14.88 O
ATOM 27 OP2 U B 445 45.895 126.594 53.801 1.00 17.36 O
ATOM 28 O5' U B 445 46.232 127.924 51.737 1.00 16.88 O
TER

Atoms:
OP1: (40.549,138.864,42.489)
OP2: (38.680,137.147,42.858)
C3': (42.288,136.641,46.286)
C1': (40.729,136.203,48.014)
C5': (41.023,138.669,45.461)
O6: (37.213,131.461,46.870)
O4': (40.459,137.493,47.476)
C8: (38.942,135.380,46.397)
C2: (39.411,132.351,49.511)
C6: (37.988,132.171,47.522)
C5: (38.469,133.481,47.233)
C4: (39.374,134.058,48.100)
P: (39.500,138.275,43.357)
C4': (41.568,137.927,46.646)
C2': (42.157,135.846,47.581)
O2': (43.038,136.348,48.562)
N1: (38.522,131.685,48.707)
N2: (39.818,131.715,50.617)
N3: (39.875,133.558,49.250)
N7: (38.196,134.332,46.172)
N9: (39.712,135.265,47.529)
O5': (40.203,137.790,44.690)
O3': (43.636,136.930,45.882)
OP1: (43.517,125.105,57.260)
OP2: (44.335,127.431,57.917)
C3': (43.370,127.700,52.928)
C1': (41.772,129.433,53.001)
C5': (42.307,126.393,54.858)
O6: (44.207,134.463,55.174)
O4': (41.350,128.399,53.877)
C8: (42.848,130.413,55.082)
C2: (42.588,133.625,52.116)
C6: (43.608,133.765,54.349)
C5: (43.216,132.413,54.464)
C4: (42.575,131.805,53.396)
P: (43.335,126.581,57.261)
C4': (42.109,127.188,53.594)
C2': (42.824,128.826,52.069)
O2': (42.183,128.350,50.906)
N1: (43.243,134.303,53.114)
N2: (42.310,134.337,51.026)
N3: (42.232,132.345,52.199)
N7: (43.371,131.528,55.517)
N9: (42.361,130.504,53.796)
O5': (43.146,127.098,55.770)
O3': (44.058,126.721,52.177)
Image (generated by PyMOL):
PyMOL image
show in jmol