Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:9108:9109
Extra
PDB:
ATOM 1 O3' C A 107 48.566 44.370 131.700 1.00 83.74 O
ATOM 2 P G A 108 48.924 43.027 130.892 1.00 84.85 P
ATOM 3 OP1 G A 108 49.207 41.951 131.877 1.00 85.82 O
ATOM 4 OP2 G A 108 49.949 43.365 129.869 1.00 86.11 O
ATOM 5 O5' G A 108 47.565 42.677 130.134 1.00 84.59 O
ATOM 6 C5' G A 108 46.356 42.429 130.876 1.00 83.77 C
ATOM 7 C4' G A 108 45.195 42.209 129.939 1.00 83.30 C
ATOM 8 O4' G A 108 44.896 43.435 129.224 1.00 84.00 O
ATOM 9 C3' G A 108 45.416 41.194 128.835 1.00 83.66 C
ATOM 10 O3' G A 108 45.261 39.863 129.293 1.00 84.98 O
ATOM 11 C2' G A 108 44.353 41.596 127.823 1.00 84.19 C
ATOM 12 O2' G A 108 43.054 41.165 128.175 1.00 82.98 O
ATOM 13 C1' G A 108 44.424 43.120 127.919 1.00 84.47 C
ATOM 14 N9 G A 108 45.345 43.690 126.937 1.00 84.91 N
ATOM 15 C8 G A 108 46.638 44.114 127.147 1.00 84.72 C
ATOM 16 N7 G A 108 47.206 44.579 126.068 1.00 84.44 N
ATOM 17 C5 G A 108 46.233 44.457 125.086 1.00 84.41 C
ATOM 18 C6 G A 108 46.268 44.801 123.710 1.00 84.23 C
ATOM 19 O6 G A 108 47.195 45.302 123.063 1.00 83.59 O
ATOM 20 N1 G A 108 45.063 44.501 123.079 1.00 84.24 N
ATOM 21 C2 G A 108 43.969 43.939 123.691 1.00 83.68 C
ATOM 22 N2 G A 108 42.905 43.710 122.911 1.00 82.84 N
ATOM 23 N3 G A 108 43.923 43.622 124.972 1.00 84.07 N
ATOM 24 C4 G A 108 45.080 43.905 125.605 1.00 84.42 C
ATOM 25 P G A 109 45.769 38.644 128.377 1.00 86.67 P
ATOM 26 OP1 G A 109 45.561 37.392 129.155 1.00 86.75 O
ATOM 27 OP2 G A 109 47.122 38.960 127.838 1.00 85.18 O
ATOM 28 O5' G A 109 44.736 38.635 127.166 1.00 85.06 O
TER
ATOM 1 O3' G B 108 45.261 39.863 129.293 1.00 84.98 O
ATOM 2 P G B 109 45.769 38.644 128.377 1.00 86.67 P
ATOM 3 OP1 G B 109 45.561 37.392 129.155 1.00 86.75 O
ATOM 4 OP2 G B 109 47.122 38.960 127.838 1.00 85.18 O
ATOM 5 O5' G B 109 44.736 38.635 127.166 1.00 85.06 O
ATOM 6 C5' G B 109 45.051 37.957 125.948 1.00 83.42 C
ATOM 7 C4' G B 109 44.023 38.275 124.897 1.00 82.54 C
ATOM 8 O4' G B 109 43.868 39.715 124.777 1.00 82.19 O
ATOM 9 C3' G B 109 44.425 37.813 123.513 1.00 81.74 C
ATOM 10 O3' G B 109 44.107 36.447 123.310 1.00 81.66 O
ATOM 11 C2' G B 109 43.661 38.770 122.612 1.00 81.42 C
ATOM 12 O2' G B 109 42.304 38.413 122.467 1.00 80.52 O
ATOM 13 C1' G B 109 43.786 40.077 123.405 1.00 81.31 C
ATOM 14 N9 G B 109 44.995 40.831 123.069 1.00 80.57 N
ATOM 15 C8 G B 109 46.068 41.078 123.895 1.00 80.70 C
ATOM 16 N7 G B 109 47.022 41.749 123.311 1.00 80.10 N
ATOM 17 C5 G B 109 46.552 41.967 122.024 1.00 79.75 C
ATOM 18 C6 G B 109 47.155 42.636 120.930 1.00 79.00 C
ATOM 19 O6 G B 109 48.267 43.173 120.874 1.00 78.67 O
ATOM 20 N1 G B 109 46.328 42.635 119.814 1.00 79.59 N
ATOM 21 C2 G B 109 45.083 42.056 119.752 1.00 79.86 C
ATOM 22 N2 G B 109 44.436 42.156 118.581 1.00 78.86 N
ATOM 23 N3 G B 109 44.513 41.424 120.764 1.00 80.20 N
ATOM 24 C4 G B 109 45.297 41.417 121.861 1.00 79.72 C
ATOM 25 P U B 110 45.185 35.480 122.620 1.00 82.42 P
ATOM 26 OP1 U B 110 44.594 34.120 122.551 1.00 81.92 O
ATOM 27 OP2 U B 110 46.490 35.682 123.310 1.00 80.38 O
ATOM 28 O5' U B 110 45.273 36.044 121.132 1.00 82.75 O
TER
ATOM 2 P G A 108 48.924 43.027 130.892 1.00 84.85 P
ATOM 3 OP1 G A 108 49.207 41.951 131.877 1.00 85.82 O
ATOM 4 OP2 G A 108 49.949 43.365 129.869 1.00 86.11 O
ATOM 5 O5' G A 108 47.565 42.677 130.134 1.00 84.59 O
ATOM 6 C5' G A 108 46.356 42.429 130.876 1.00 83.77 C
ATOM 7 C4' G A 108 45.195 42.209 129.939 1.00 83.30 C
ATOM 8 O4' G A 108 44.896 43.435 129.224 1.00 84.00 O
ATOM 9 C3' G A 108 45.416 41.194 128.835 1.00 83.66 C
ATOM 10 O3' G A 108 45.261 39.863 129.293 1.00 84.98 O
ATOM 11 C2' G A 108 44.353 41.596 127.823 1.00 84.19 C
ATOM 12 O2' G A 108 43.054 41.165 128.175 1.00 82.98 O
ATOM 13 C1' G A 108 44.424 43.120 127.919 1.00 84.47 C
ATOM 14 N9 G A 108 45.345 43.690 126.937 1.00 84.91 N
ATOM 15 C8 G A 108 46.638 44.114 127.147 1.00 84.72 C
ATOM 16 N7 G A 108 47.206 44.579 126.068 1.00 84.44 N
ATOM 17 C5 G A 108 46.233 44.457 125.086 1.00 84.41 C
ATOM 18 C6 G A 108 46.268 44.801 123.710 1.00 84.23 C
ATOM 19 O6 G A 108 47.195 45.302 123.063 1.00 83.59 O
ATOM 20 N1 G A 108 45.063 44.501 123.079 1.00 84.24 N
ATOM 21 C2 G A 108 43.969 43.939 123.691 1.00 83.68 C
ATOM 22 N2 G A 108 42.905 43.710 122.911 1.00 82.84 N
ATOM 23 N3 G A 108 43.923 43.622 124.972 1.00 84.07 N
ATOM 24 C4 G A 108 45.080 43.905 125.605 1.00 84.42 C
ATOM 25 P G A 109 45.769 38.644 128.377 1.00 86.67 P
ATOM 26 OP1 G A 109 45.561 37.392 129.155 1.00 86.75 O
ATOM 27 OP2 G A 109 47.122 38.960 127.838 1.00 85.18 O
ATOM 28 O5' G A 109 44.736 38.635 127.166 1.00 85.06 O
TER
ATOM 1 O3' G B 108 45.261 39.863 129.293 1.00 84.98 O
ATOM 2 P G B 109 45.769 38.644 128.377 1.00 86.67 P
ATOM 3 OP1 G B 109 45.561 37.392 129.155 1.00 86.75 O
ATOM 4 OP2 G B 109 47.122 38.960 127.838 1.00 85.18 O
ATOM 5 O5' G B 109 44.736 38.635 127.166 1.00 85.06 O
ATOM 6 C5' G B 109 45.051 37.957 125.948 1.00 83.42 C
ATOM 7 C4' G B 109 44.023 38.275 124.897 1.00 82.54 C
ATOM 8 O4' G B 109 43.868 39.715 124.777 1.00 82.19 O
ATOM 9 C3' G B 109 44.425 37.813 123.513 1.00 81.74 C
ATOM 10 O3' G B 109 44.107 36.447 123.310 1.00 81.66 O
ATOM 11 C2' G B 109 43.661 38.770 122.612 1.00 81.42 C
ATOM 12 O2' G B 109 42.304 38.413 122.467 1.00 80.52 O
ATOM 13 C1' G B 109 43.786 40.077 123.405 1.00 81.31 C
ATOM 14 N9 G B 109 44.995 40.831 123.069 1.00 80.57 N
ATOM 15 C8 G B 109 46.068 41.078 123.895 1.00 80.70 C
ATOM 16 N7 G B 109 47.022 41.749 123.311 1.00 80.10 N
ATOM 17 C5 G B 109 46.552 41.967 122.024 1.00 79.75 C
ATOM 18 C6 G B 109 47.155 42.636 120.930 1.00 79.00 C
ATOM 19 O6 G B 109 48.267 43.173 120.874 1.00 78.67 O
ATOM 20 N1 G B 109 46.328 42.635 119.814 1.00 79.59 N
ATOM 21 C2 G B 109 45.083 42.056 119.752 1.00 79.86 C
ATOM 22 N2 G B 109 44.436 42.156 118.581 1.00 78.86 N
ATOM 23 N3 G B 109 44.513 41.424 120.764 1.00 80.20 N
ATOM 24 C4 G B 109 45.297 41.417 121.861 1.00 79.72 C
ATOM 25 P U B 110 45.185 35.480 122.620 1.00 82.42 P
ATOM 26 OP1 U B 110 44.594 34.120 122.551 1.00 81.92 O
ATOM 27 OP2 U B 110 46.490 35.682 123.310 1.00 80.38 O
ATOM 28 O5' U B 110 45.273 36.044 121.132 1.00 82.75 O
TER
Atoms:
OP1: (49.207,41.951,131.877)
OP2: (49.949,43.365,129.869)
C3': (45.416,41.194,128.835)
C1': (44.424,43.120,127.919)
C5': (46.356,42.429,130.876)
O6: (47.195,45.302,123.063)
O4': (44.896,43.435,129.224)
C8: (46.638,44.114,127.147)
C2: (43.969,43.939,123.691)
C6: (46.268,44.801,123.710)
C5: (46.233,44.457,125.086)
C4: (45.080,43.905,125.605)
P: (48.924,43.027,130.892)
C4': (45.195,42.209,129.939)
C2': (44.353,41.596,127.823)
O2': (43.054,41.165,128.175)
N1: (45.063,44.501,123.079)
N2: (42.905,43.710,122.911)
N3: (43.923,43.622,124.972)
N7: (47.206,44.579,126.068)
N9: (45.345,43.690,126.937)
O5': (47.565,42.677,130.134)
O3': (45.261,39.863,129.293)
OP2: (49.949,43.365,129.869)
C3': (45.416,41.194,128.835)
C1': (44.424,43.120,127.919)
C5': (46.356,42.429,130.876)
O6: (47.195,45.302,123.063)
O4': (44.896,43.435,129.224)
C8: (46.638,44.114,127.147)
C2: (43.969,43.939,123.691)
C6: (46.268,44.801,123.710)
C5: (46.233,44.457,125.086)
C4: (45.080,43.905,125.605)
P: (48.924,43.027,130.892)
C4': (45.195,42.209,129.939)
C2': (44.353,41.596,127.823)
O2': (43.054,41.165,128.175)
N1: (45.063,44.501,123.079)
N2: (42.905,43.710,122.911)
N3: (43.923,43.622,124.972)
N7: (47.206,44.579,126.068)
N9: (45.345,43.690,126.937)
O5': (47.565,42.677,130.134)
O3': (45.261,39.863,129.293)
OP1: (45.561,37.392,129.155)
OP2: (47.122,38.960,127.838)
C3': (44.425,37.813,123.513)
C1': (43.786,40.077,123.405)
C5': (45.051,37.957,125.948)
O6: (48.267,43.173,120.874)
O4': (43.868,39.715,124.777)
C8: (46.068,41.078,123.895)
C2: (45.083,42.056,119.752)
C6: (47.155,42.636,120.930)
C5: (46.552,41.967,122.024)
C4: (45.297,41.417,121.861)
P: (45.769,38.644,128.377)
C4': (44.023,38.275,124.897)
C2': (43.661,38.770,122.612)
O2': (42.304,38.413,122.467)
N1: (46.328,42.635,119.814)
N2: (44.436,42.156,118.581)
N3: (44.513,41.424,120.764)
N7: (47.022,41.749,123.311)
N9: (44.995,40.831,123.069)
O5': (44.736,38.635,127.166)
O3': (44.107,36.447,123.310)
OP2: (47.122,38.960,127.838)
C3': (44.425,37.813,123.513)
C1': (43.786,40.077,123.405)
C5': (45.051,37.957,125.948)
O6: (48.267,43.173,120.874)
O4': (43.868,39.715,124.777)
C8: (46.068,41.078,123.895)
C2: (45.083,42.056,119.752)
C6: (47.155,42.636,120.930)
C5: (46.552,41.967,122.024)
C4: (45.297,41.417,121.861)
P: (45.769,38.644,128.377)
C4': (44.023,38.275,124.897)
C2': (43.661,38.770,122.612)
O2': (42.304,38.413,122.467)
N1: (46.328,42.635,119.814)
N2: (44.436,42.156,118.581)
N3: (44.513,41.424,120.764)
N7: (47.022,41.749,123.311)
N9: (44.995,40.831,123.069)
O5': (44.736,38.635,127.166)
O3': (44.107,36.447,123.310)
Image (generated by PyMOL):