ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02408:02539

Extra

PDB:
ATOM 1 O3' A A2407 72.937 116.957 164.696 1.00 56.36 O
ATOM 2 P G A2408 72.774 117.736 163.305 1.00 54.06 P
ATOM 3 OP1 G A2408 71.329 118.039 163.137 1.00 57.49 O
ATOM 4 OP2 G A2408 73.491 116.961 162.263 1.00 55.18 O
ATOM 5 O5' G A2408 73.548 119.106 163.537 1.00 56.00 O
ATOM 6 C5' G A2408 73.109 120.049 164.531 1.00 56.40 C
ATOM 7 C4' G A2408 74.104 121.176 164.638 1.00 56.56 C
ATOM 8 O4' G A2408 75.378 120.635 165.068 1.00 56.51 O
ATOM 9 C3' G A2408 74.411 121.863 163.319 1.00 57.16 C
ATOM 10 O3' G A2408 73.452 122.877 163.038 1.00 58.66 O
ATOM 11 C2' G A2408 75.809 122.419 163.549 1.00 56.27 C
ATOM 12 O2' G A2408 75.799 123.627 164.282 1.00 57.96 O
ATOM 13 C1' G A2408 76.433 121.319 164.411 1.00 56.10 C
ATOM 14 N9 G A2408 77.242 120.335 163.694 1.00 55.21 N
ATOM 15 C8 G A2408 76.903 119.035 163.408 1.00 54.92 C
ATOM 16 N7 G A2408 77.856 118.378 162.805 1.00 54.88 N
ATOM 17 C5 G A2408 78.882 119.303 162.675 1.00 54.49 C
ATOM 18 C6 G A2408 80.176 119.164 162.113 1.00 54.97 C
ATOM 19 O6 G A2408 80.697 118.158 161.614 1.00 55.40 O
ATOM 20 N1 G A2408 80.890 120.356 162.175 1.00 55.83 N
ATOM 21 C2 G A2408 80.421 121.527 162.712 1.00 55.96 C
ATOM 22 N2 G A2408 81.257 122.575 162.661 1.00 56.85 N
ATOM 23 N3 G A2408 79.223 121.664 163.253 1.00 55.62 N
ATOM 24 C4 G A2408 78.512 120.520 163.201 1.00 54.41 C
ATOM 25 P A A2409 72.866 123.030 161.551 1.00 59.12 P
ATOM 26 OP1 A A2409 71.879 124.139 161.583 1.00 58.93 O
ATOM 27 OP2 A A2409 72.456 121.692 161.063 1.00 60.81 O
ATOM 28 O5' A A2409 74.119 123.489 160.686 1.00 59.46 O
TER

ATOM 1 O3' A B2538 88.772 126.476 164.210 1.00 72.57 O
ATOM 2 P G B2539 88.009 127.884 164.039 1.00 74.18 P
ATOM 3 OP1 G B2539 88.838 128.721 163.134 1.00 74.34 O
ATOM 4 OP2 G B2539 87.663 128.389 165.394 1.00 73.92 O
ATOM 5 O5' G B2539 86.644 127.525 163.291 1.00 73.66 O
ATOM 6 C5' G B2539 86.644 126.771 162.063 1.00 71.83 C
ATOM 7 C4' G B2539 85.414 125.890 161.977 1.00 70.93 C
ATOM 8 O4' G B2539 85.249 125.173 163.232 1.00 71.75 O
ATOM 9 C3' G B2539 84.059 126.560 161.795 1.00 69.41 C
ATOM 10 O3' G B2539 83.795 126.912 160.442 1.00 67.48 O
ATOM 11 C2' G B2539 83.115 125.454 162.241 1.00 70.06 C
ATOM 12 O2' G B2539 82.971 124.437 161.270 1.00 69.72 O
ATOM 13 C1' G B2539 83.874 124.889 163.439 1.00 70.76 C
ATOM 14 N9 G B2539 83.437 125.499 164.693 1.00 70.80 N
ATOM 15 C8 G B2539 84.098 126.437 165.450 1.00 70.71 C
ATOM 16 N7 G B2539 83.437 126.789 166.520 1.00 71.05 N
ATOM 17 C5 G B2539 82.270 126.037 166.468 1.00 70.80 C
ATOM 18 C6 G B2539 81.164 125.988 167.357 1.00 70.15 C
ATOM 19 O6 G B2539 80.989 126.622 168.399 1.00 70.92 O
ATOM 20 N1 G B2539 80.196 125.089 166.922 1.00 68.65 N
ATOM 21 C2 G B2539 80.277 124.335 165.778 1.00 68.34 C
ATOM 22 N2 G B2539 79.244 123.523 165.527 1.00 66.36 N
ATOM 23 N3 G B2539 81.299 124.372 164.941 1.00 69.54 N
ATOM 24 C4 G B2539 82.254 125.237 165.346 1.00 70.92 C
ATOM 25 P G B2540 82.680 128.023 160.107 1.00 65.64 P
ATOM 26 OP1 G B2540 82.291 127.831 158.687 1.00 67.06 O
ATOM 27 OP2 G B2540 83.180 129.345 160.559 1.00 66.02 O
ATOM 28 O5' G B2540 81.432 127.636 161.019 1.00 66.80 O
TER

Atoms:
OP1: (71.329,118.039,163.137)
OP2: (73.491,116.961,162.263)
C3': (74.411,121.863,163.319)
C1': (76.433,121.319,164.411)
C5': (73.109,120.049,164.531)
O6: (80.697,118.158,161.614)
O4': (75.378,120.635,165.068)
C8: (76.903,119.035,163.408)
C2: (80.421,121.527,162.712)
C6: (80.176,119.164,162.113)
C5: (78.882,119.303,162.675)
C4: (78.512,120.520,163.201)
P: (72.774,117.736,163.305)
C4': (74.104,121.176,164.638)
C2': (75.809,122.419,163.549)
O2': (75.799,123.627,164.282)
N1: (80.890,120.356,162.175)
N2: (81.257,122.575,162.661)
N3: (79.223,121.664,163.253)
N7: (77.856,118.378,162.805)
N9: (77.242,120.335,163.694)
O5': (73.548,119.106,163.537)
O3': (73.452,122.877,163.038)
OP1: (88.838,128.721,163.134)
OP2: (87.663,128.389,165.394)
C3': (84.059,126.560,161.795)
C1': (83.874,124.889,163.439)
C5': (86.644,126.771,162.063)
O6: (80.989,126.622,168.399)
O4': (85.249,125.173,163.232)
C8: (84.098,126.437,165.450)
C2: (80.277,124.335,165.778)
C6: (81.164,125.988,167.357)
C5: (82.270,126.037,166.468)
C4: (82.254,125.237,165.346)
P: (88.009,127.884,164.039)
C4': (85.414,125.890,161.977)
C2': (83.115,125.454,162.241)
O2': (82.971,124.437,161.270)
N1: (80.196,125.089,166.922)
N2: (79.244,123.523,165.527)
N3: (81.299,124.372,164.941)
N7: (83.437,126.789,166.520)
N9: (83.437,125.499,164.693)
O5': (86.644,127.525,163.291)
O3': (83.795,126.912,160.442)
Image (generated by PyMOL):
PyMOL image
show in jmol