ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 5MSF:R15:R16

Extra

PDB:
ATOM 1 O3' C A 14 -49.459 49.655 60.246 0.70 97.76 O
ATOM 2 P G A 15 -49.289 48.118 60.687 0.70100.00 P
ATOM 3 OP1 G A 15 -47.873 47.729 60.456 0.70 94.82 O
ATOM 4 OP2 G A 15 -50.384 47.326 60.066 0.70 86.63 O
ATOM 5 O5' G A 15 -49.538 48.158 62.259 0.70 97.47 O
ATOM 6 C5' G A 15 -48.756 49.016 63.088 0.70 98.43 C
ATOM 7 C4' G A 15 -49.199 48.903 64.526 0.70 99.80 C
ATOM 8 O4' G A 15 -50.505 49.519 64.691 0.70100.00 O
ATOM 9 C3' G A 15 -49.416 47.477 64.989 0.70100.00 C
ATOM 10 O3' G A 15 -48.193 46.858 65.337 0.70100.00 O
ATOM 11 C2' G A 15 -50.375 47.649 66.159 0.70 95.66 C
ATOM 12 O2' G A 15 -49.720 48.034 67.352 0.70 88.30 O
ATOM 13 C1' G A 15 -51.252 48.791 65.654 0.70 95.24 C
ATOM 14 N9 G A 15 -52.495 48.341 65.036 0.70 93.67 N
ATOM 15 C8 G A 15 -52.770 48.194 63.698 0.70 90.90 C
ATOM 16 N7 G A 15 -53.989 47.782 63.468 0.70 92.90 N
ATOM 17 C5 G A 15 -54.547 47.648 64.733 0.70 92.93 C
ATOM 18 C6 G A 15 -55.851 47.240 65.133 0.70 91.02 C
ATOM 19 O6 G A 15 -56.807 46.906 64.421 0.70 89.55 O
ATOM 20 N1 G A 15 -55.985 47.245 66.521 0.70 85.54 N
ATOM 21 C2 G A 15 -54.994 47.597 67.412 0.70 87.74 C
ATOM 22 N2 G A 15 -55.305 47.538 68.714 0.70 77.53 N
ATOM 23 N3 G A 15 -53.782 47.979 67.051 0.70 89.57 N
ATOM 24 C4 G A 15 -53.632 47.984 65.709 0.70 93.43 C
ATOM 25 P G A 16 -47.995 45.299 65.027 0.70100.00 P
ATOM 26 OP1 G A 16 -46.555 45.027 64.794 0.70100.00 O
ATOM 27 OP2 G A 16 -48.986 44.932 63.980 0.70100.00 O
ATOM 28 O5' G A 16 -48.446 44.606 66.385 0.70100.00 O
TER

ATOM 1 O3' G B 15 -48.193 46.858 65.337 0.70100.00 O
ATOM 2 P G B 16 -47.995 45.299 65.027 0.70100.00 P
ATOM 3 OP1 G B 16 -46.555 45.027 64.794 0.70100.00 O
ATOM 4 OP2 G B 16 -48.986 44.932 63.980 0.70100.00 O
ATOM 5 O5' G B 16 -48.446 44.606 66.385 0.70100.00 O
ATOM 6 C5' G B 16 -49.326 43.495 66.364 0.70 97.90 C
ATOM 7 C4' G B 16 -50.193 43.498 67.594 0.70100.00 C
ATOM 8 O4' G B 16 -51.141 44.599 67.523 0.70100.00 O
ATOM 9 C3' G B 16 -51.057 42.268 67.767 0.70100.00 C
ATOM 10 O3' G B 16 -50.304 41.212 68.346 0.70100.00 O
ATOM 11 C2' G B 16 -52.175 42.798 68.654 0.70100.00 C
ATOM 12 O2' G B 16 -51.775 42.918 70.007 0.70 98.87 O
ATOM 13 C1' G B 16 -52.395 44.184 68.053 0.70100.00 C
ATOM 14 N9 G B 16 -53.332 44.126 66.934 0.70100.00 N
ATOM 15 C8 G B 16 -53.006 44.284 65.609 0.70100.00 C
ATOM 16 N7 G B 16 -54.028 44.171 64.809 0.70100.00 N
ATOM 17 C5 G B 16 -55.105 43.924 65.651 0.70100.00 C
ATOM 18 C6 G B 16 -56.473 43.717 65.343 0.70100.00 C
ATOM 19 O6 G B 16 -57.013 43.709 64.235 0.70 99.20 O
ATOM 20 N1 G B 16 -57.234 43.502 66.488 0.70 96.60 N
ATOM 21 C2 G B 16 -56.746 43.486 67.771 0.70 94.91 C
ATOM 22 N2 G B 16 -57.669 43.253 68.731 0.70 85.47 N
ATOM 23 N3 G B 16 -55.461 43.680 68.082 0.70 93.53 N
ATOM 24 C4 G B 16 -54.701 43.892 66.973 0.70100.00 C
ATOM 25 P G B 17 -50.121 39.827 67.540 0.70100.00 P
ATOM 26 OP1 G B 17 -48.668 39.593 67.349 0.70100.00 O
ATOM 27 OP2 G B 17 -51.009 39.862 66.345 0.70100.00 O
ATOM 28 O5' G B 17 -50.691 38.738 68.560 0.70100.00 O
TER

Atoms:
OP1: (-47.873,47.729,60.456)
OP2: (-50.384,47.326,60.066)
C3': (-49.416,47.477,64.989)
C1': (-51.252,48.791,65.654)
C5': (-48.756,49.016,63.088)
O6: (-56.807,46.906,64.421)
O4': (-50.505,49.519,64.691)
C8: (-52.770,48.194,63.698)
C2: (-54.994,47.597,67.412)
C6: (-55.851,47.240,65.133)
C5: (-54.547,47.648,64.733)
C4: (-53.632,47.984,65.709)
P: (-49.289,48.118,60.687)
C4': (-49.199,48.903,64.526)
C2': (-50.375,47.649,66.159)
O2': (-49.720,48.034,67.352)
N1: (-55.985,47.245,66.521)
N2: (-55.305,47.538,68.714)
N3: (-53.782,47.979,67.051)
N7: (-53.989,47.782,63.468)
N9: (-52.495,48.341,65.036)
O5': (-49.538,48.158,62.259)
O3': (-48.193,46.858,65.337)
OP1: (-46.555,45.027,64.794)
OP2: (-48.986,44.932,63.980)
C3': (-51.057,42.268,67.767)
C1': (-52.395,44.184,68.053)
C5': (-49.326,43.495,66.364)
O6: (-57.013,43.709,64.235)
O4': (-51.141,44.599,67.523)
C8: (-53.006,44.284,65.609)
C2: (-56.746,43.486,67.771)
C6: (-56.473,43.717,65.343)
C5: (-55.105,43.924,65.651)
C4: (-54.701,43.892,66.973)
P: (-47.995,45.299,65.027)
C4': (-50.193,43.498,67.594)
C2': (-52.175,42.798,68.654)
O2': (-51.775,42.918,70.007)
N1: (-57.234,43.502,66.488)
N2: (-57.669,43.253,68.731)
N3: (-55.461,43.680,68.082)
N7: (-54.028,44.171,64.809)
N9: (-53.332,44.126,66.934)
O5': (-48.446,44.606,66.385)
O3': (-50.304,41.212,68.346)
Image (generated by PyMOL):
PyMOL image
show in jmol