Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11662:11663
Extra
PDB:
ATOM 1 O3' U A1661 -30.783 42.114 135.449 1.00 80.49 O
ATOM 2 P G A1662 -29.946 42.962 134.361 1.00 74.41 P
ATOM 3 OP1 G A1662 -30.582 44.303 134.264 1.00 75.06 O
ATOM 4 OP2 G A1662 -29.845 42.118 133.116 1.00 73.57 O
ATOM 5 O5' G A1662 -28.506 43.086 135.033 1.00 74.30 O
ATOM 6 C5' G A1662 -28.287 43.924 136.157 1.00 75.01 C
ATOM 7 C4' G A1662 -27.097 43.471 136.977 1.00 74.84 C
ATOM 8 O4' G A1662 -27.162 42.037 137.205 1.00 74.42 O
ATOM 9 C3' G A1662 -25.735 43.684 136.353 1.00 74.27 C
ATOM 10 O3' G A1662 -25.268 45.014 136.489 1.00 74.71 O
ATOM 11 C2' G A1662 -24.873 42.632 137.059 1.00 73.94 C
ATOM 12 O2' G A1662 -24.515 43.053 138.363 1.00 74.55 O
ATOM 13 C1' G A1662 -25.863 41.481 137.189 1.00 73.84 C
ATOM 14 N9 G A1662 -25.776 40.550 136.053 1.00 73.01 N
ATOM 15 C8 G A1662 -26.661 40.439 135.018 1.00 72.79 C
ATOM 16 N7 G A1662 -26.359 39.511 134.170 1.00 72.04 N
ATOM 17 C5 G A1662 -25.180 38.978 134.666 1.00 71.72 C
ATOM 18 C6 G A1662 -24.342 37.945 134.148 1.00 70.93 C
ATOM 19 O6 G A1662 -24.529 37.285 133.120 1.00 70.35 O
ATOM 20 N1 G A1662 -23.225 37.716 134.962 1.00 70.88 N
ATOM 21 C2 G A1662 -22.960 38.407 136.136 1.00 71.53 C
ATOM 22 N2 G A1662 -21.858 38.086 136.832 1.00 71.42 N
ATOM 23 N3 G A1662 -23.726 39.386 136.611 1.00 72.27 N
ATOM 24 C4 G A1662 -24.813 39.612 135.834 1.00 72.32 C
ATOM 25 P G A1663 -24.300 45.646 135.379 1.00 74.58 P
ATOM 26 OP1 G A1663 -24.136 47.075 135.705 1.00 75.23 O
ATOM 27 OP2 G A1663 -24.843 45.277 134.060 1.00 74.05 O
ATOM 28 O5' G A1663 -22.936 44.887 135.649 1.00 74.03 O
TER
ATOM 1 O3' G B1662 -25.268 45.014 136.489 1.00 74.71 O
ATOM 2 P G B1663 -24.300 45.646 135.379 1.00 74.58 P
ATOM 3 OP1 G B1663 -24.136 47.075 135.705 1.00 75.23 O
ATOM 4 OP2 G B1663 -24.843 45.277 134.060 1.00 74.05 O
ATOM 5 O5' G B1663 -22.936 44.887 135.649 1.00 74.03 O
ATOM 6 C5' G B1663 -22.240 45.065 136.879 1.00 74.43 C
ATOM 7 C4' G B1663 -21.008 44.193 136.963 1.00 73.81 C
ATOM 8 O4' G B1663 -21.388 42.785 136.975 1.00 73.39 O
ATOM 9 C3' G B1663 -20.032 44.309 135.802 1.00 73.12 C
ATOM 10 O3' G B1663 -19.164 45.413 135.930 1.00 73.38 O
ATOM 11 C2' G B1663 -19.311 42.972 135.824 1.00 72.45 C
ATOM 12 O2' G B1663 -18.277 42.989 136.794 1.00 72.61 O
ATOM 13 C1' G B1663 -20.416 42.019 136.288 1.00 72.57 C
ATOM 14 N9 G B1663 -21.074 41.376 135.157 1.00 72.03 N
ATOM 15 C8 G B1663 -22.265 41.834 134.653 1.00 72.30 C
ATOM 16 N7 G B1663 -22.693 41.145 133.634 1.00 71.76 N
ATOM 17 C5 G B1663 -21.718 40.181 133.480 1.00 71.10 C
ATOM 18 C6 G B1663 -21.707 39.168 132.521 1.00 70.36 C
ATOM 19 O6 G B1663 -22.579 38.997 131.661 1.00 70.19 O
ATOM 20 N1 G B1663 -20.566 38.373 132.650 1.00 69.84 N
ATOM 21 C2 G B1663 -19.588 38.552 133.613 1.00 70.04 C
ATOM 22 N2 G B1663 -18.594 37.658 133.551 1.00 69.46 N
ATOM 23 N3 G B1663 -19.591 39.517 134.538 1.00 70.75 N
ATOM 24 C4 G B1663 -20.689 40.295 134.401 1.00 71.24 C
ATOM 25 P U B1664 -18.653 46.173 134.620 1.00 78.08 P
ATOM 26 OP1 U B1664 -17.570 47.093 135.038 1.00 78.34 O
ATOM 27 OP2 U B1664 -19.849 46.733 133.949 1.00 78.32 O
ATOM 28 O5' U B1664 -18.046 44.995 133.751 1.00 77.12 O
TER
ATOM 2 P G A1662 -29.946 42.962 134.361 1.00 74.41 P
ATOM 3 OP1 G A1662 -30.582 44.303 134.264 1.00 75.06 O
ATOM 4 OP2 G A1662 -29.845 42.118 133.116 1.00 73.57 O
ATOM 5 O5' G A1662 -28.506 43.086 135.033 1.00 74.30 O
ATOM 6 C5' G A1662 -28.287 43.924 136.157 1.00 75.01 C
ATOM 7 C4' G A1662 -27.097 43.471 136.977 1.00 74.84 C
ATOM 8 O4' G A1662 -27.162 42.037 137.205 1.00 74.42 O
ATOM 9 C3' G A1662 -25.735 43.684 136.353 1.00 74.27 C
ATOM 10 O3' G A1662 -25.268 45.014 136.489 1.00 74.71 O
ATOM 11 C2' G A1662 -24.873 42.632 137.059 1.00 73.94 C
ATOM 12 O2' G A1662 -24.515 43.053 138.363 1.00 74.55 O
ATOM 13 C1' G A1662 -25.863 41.481 137.189 1.00 73.84 C
ATOM 14 N9 G A1662 -25.776 40.550 136.053 1.00 73.01 N
ATOM 15 C8 G A1662 -26.661 40.439 135.018 1.00 72.79 C
ATOM 16 N7 G A1662 -26.359 39.511 134.170 1.00 72.04 N
ATOM 17 C5 G A1662 -25.180 38.978 134.666 1.00 71.72 C
ATOM 18 C6 G A1662 -24.342 37.945 134.148 1.00 70.93 C
ATOM 19 O6 G A1662 -24.529 37.285 133.120 1.00 70.35 O
ATOM 20 N1 G A1662 -23.225 37.716 134.962 1.00 70.88 N
ATOM 21 C2 G A1662 -22.960 38.407 136.136 1.00 71.53 C
ATOM 22 N2 G A1662 -21.858 38.086 136.832 1.00 71.42 N
ATOM 23 N3 G A1662 -23.726 39.386 136.611 1.00 72.27 N
ATOM 24 C4 G A1662 -24.813 39.612 135.834 1.00 72.32 C
ATOM 25 P G A1663 -24.300 45.646 135.379 1.00 74.58 P
ATOM 26 OP1 G A1663 -24.136 47.075 135.705 1.00 75.23 O
ATOM 27 OP2 G A1663 -24.843 45.277 134.060 1.00 74.05 O
ATOM 28 O5' G A1663 -22.936 44.887 135.649 1.00 74.03 O
TER
ATOM 1 O3' G B1662 -25.268 45.014 136.489 1.00 74.71 O
ATOM 2 P G B1663 -24.300 45.646 135.379 1.00 74.58 P
ATOM 3 OP1 G B1663 -24.136 47.075 135.705 1.00 75.23 O
ATOM 4 OP2 G B1663 -24.843 45.277 134.060 1.00 74.05 O
ATOM 5 O5' G B1663 -22.936 44.887 135.649 1.00 74.03 O
ATOM 6 C5' G B1663 -22.240 45.065 136.879 1.00 74.43 C
ATOM 7 C4' G B1663 -21.008 44.193 136.963 1.00 73.81 C
ATOM 8 O4' G B1663 -21.388 42.785 136.975 1.00 73.39 O
ATOM 9 C3' G B1663 -20.032 44.309 135.802 1.00 73.12 C
ATOM 10 O3' G B1663 -19.164 45.413 135.930 1.00 73.38 O
ATOM 11 C2' G B1663 -19.311 42.972 135.824 1.00 72.45 C
ATOM 12 O2' G B1663 -18.277 42.989 136.794 1.00 72.61 O
ATOM 13 C1' G B1663 -20.416 42.019 136.288 1.00 72.57 C
ATOM 14 N9 G B1663 -21.074 41.376 135.157 1.00 72.03 N
ATOM 15 C8 G B1663 -22.265 41.834 134.653 1.00 72.30 C
ATOM 16 N7 G B1663 -22.693 41.145 133.634 1.00 71.76 N
ATOM 17 C5 G B1663 -21.718 40.181 133.480 1.00 71.10 C
ATOM 18 C6 G B1663 -21.707 39.168 132.521 1.00 70.36 C
ATOM 19 O6 G B1663 -22.579 38.997 131.661 1.00 70.19 O
ATOM 20 N1 G B1663 -20.566 38.373 132.650 1.00 69.84 N
ATOM 21 C2 G B1663 -19.588 38.552 133.613 1.00 70.04 C
ATOM 22 N2 G B1663 -18.594 37.658 133.551 1.00 69.46 N
ATOM 23 N3 G B1663 -19.591 39.517 134.538 1.00 70.75 N
ATOM 24 C4 G B1663 -20.689 40.295 134.401 1.00 71.24 C
ATOM 25 P U B1664 -18.653 46.173 134.620 1.00 78.08 P
ATOM 26 OP1 U B1664 -17.570 47.093 135.038 1.00 78.34 O
ATOM 27 OP2 U B1664 -19.849 46.733 133.949 1.00 78.32 O
ATOM 28 O5' U B1664 -18.046 44.995 133.751 1.00 77.12 O
TER
Atoms:
OP1: (-30.582,44.303,134.264)
OP2: (-29.845,42.118,133.116)
C3': (-25.735,43.684,136.353)
C1': (-25.863,41.481,137.189)
C5': (-28.287,43.924,136.157)
O6: (-24.529,37.285,133.120)
O4': (-27.162,42.037,137.205)
C8: (-26.661,40.439,135.018)
C2: (-22.960,38.407,136.136)
C6: (-24.342,37.945,134.148)
C5: (-25.180,38.978,134.666)
C4: (-24.813,39.612,135.834)
P: (-29.946,42.962,134.361)
C4': (-27.097,43.471,136.977)
C2': (-24.873,42.632,137.059)
O2': (-24.515,43.053,138.363)
N1: (-23.225,37.716,134.962)
N2: (-21.858,38.086,136.832)
N3: (-23.726,39.386,136.611)
N7: (-26.359,39.511,134.170)
N9: (-25.776,40.550,136.053)
O5': (-28.506,43.086,135.033)
O3': (-25.268,45.014,136.489)
OP2: (-29.845,42.118,133.116)
C3': (-25.735,43.684,136.353)
C1': (-25.863,41.481,137.189)
C5': (-28.287,43.924,136.157)
O6: (-24.529,37.285,133.120)
O4': (-27.162,42.037,137.205)
C8: (-26.661,40.439,135.018)
C2: (-22.960,38.407,136.136)
C6: (-24.342,37.945,134.148)
C5: (-25.180,38.978,134.666)
C4: (-24.813,39.612,135.834)
P: (-29.946,42.962,134.361)
C4': (-27.097,43.471,136.977)
C2': (-24.873,42.632,137.059)
O2': (-24.515,43.053,138.363)
N1: (-23.225,37.716,134.962)
N2: (-21.858,38.086,136.832)
N3: (-23.726,39.386,136.611)
N7: (-26.359,39.511,134.170)
N9: (-25.776,40.550,136.053)
O5': (-28.506,43.086,135.033)
O3': (-25.268,45.014,136.489)
OP1: (-24.136,47.075,135.705)
OP2: (-24.843,45.277,134.060)
C3': (-20.032,44.309,135.802)
C1': (-20.416,42.019,136.288)
C5': (-22.240,45.065,136.879)
O6: (-22.579,38.997,131.661)
O4': (-21.388,42.785,136.975)
C8: (-22.265,41.834,134.653)
C2: (-19.588,38.552,133.613)
C6: (-21.707,39.168,132.521)
C5: (-21.718,40.181,133.480)
C4: (-20.689,40.295,134.401)
P: (-24.300,45.646,135.379)
C4': (-21.008,44.193,136.963)
C2': (-19.311,42.972,135.824)
O2': (-18.277,42.989,136.794)
N1: (-20.566,38.373,132.650)
N2: (-18.594,37.658,133.551)
N3: (-19.591,39.517,134.538)
N7: (-22.693,41.145,133.634)
N9: (-21.074,41.376,135.157)
O5': (-22.936,44.887,135.649)
O3': (-19.164,45.413,135.930)
OP2: (-24.843,45.277,134.060)
C3': (-20.032,44.309,135.802)
C1': (-20.416,42.019,136.288)
C5': (-22.240,45.065,136.879)
O6: (-22.579,38.997,131.661)
O4': (-21.388,42.785,136.975)
C8: (-22.265,41.834,134.653)
C2: (-19.588,38.552,133.613)
C6: (-21.707,39.168,132.521)
C5: (-21.718,40.181,133.480)
C4: (-20.689,40.295,134.401)
P: (-24.300,45.646,135.379)
C4': (-21.008,44.193,136.963)
C2': (-19.311,42.972,135.824)
O2': (-18.277,42.989,136.794)
N1: (-20.566,38.373,132.650)
N2: (-18.594,37.658,133.551)
N3: (-19.591,39.517,134.538)
N7: (-22.693,41.145,133.634)
N9: (-21.074,41.376,135.157)
O5': (-22.936,44.887,135.649)
O3': (-19.164,45.413,135.930)
Image (generated by PyMOL):