Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCS:B27:B28
Extra
PDB:
ATOM 1 O3' U A 26 45.463 11.906 5.576 1.00 84.04 O
ATOM 2 P A A 27 44.501 10.617 5.628 1.00 80.94 P
ATOM 3 OP1 A A 27 45.132 9.628 6.547 1.00 80.82 O
ATOM 4 OP2 A A 27 44.207 10.236 4.217 1.00 81.09 O
ATOM 5 O5' A A 27 43.151 11.124 6.317 1.00 72.24 O
ATOM 6 C5' A A 27 42.035 11.548 5.532 1.00 59.28 C
ATOM 7 C4' A A 27 40.763 11.540 6.360 1.00 49.42 C
ATOM 8 O4' A A 27 40.314 10.179 6.575 1.00 45.87 O
ATOM 9 C3' A A 27 40.972 12.135 7.746 1.00 43.63 C
ATOM 10 O3' A A 27 39.927 13.025 8.115 1.00 37.45 O
ATOM 11 C2' A A 27 41.171 10.948 8.689 1.00 41.94 C
ATOM 12 O2' A A 27 40.462 11.128 9.899 1.00 41.65 O
ATOM 13 C1' A A 27 40.457 9.829 7.932 1.00 41.83 C
ATOM 14 N9 A A 27 40.974 8.465 8.026 1.00 38.87 N
ATOM 15 C8 A A 27 41.975 7.862 7.305 1.00 37.48 C
ATOM 16 N7 A A 27 42.143 6.592 7.594 1.00 35.94 N
ATOM 17 C5 A A 27 41.199 6.348 8.582 1.00 35.11 C
ATOM 18 C6 A A 27 40.866 5.193 9.305 1.00 34.23 C
ATOM 19 N6 A A 27 41.471 4.012 9.135 1.00 33.55 N
ATOM 20 N1 A A 27 39.877 5.290 10.222 1.00 35.07 N
ATOM 21 C2 A A 27 39.272 6.475 10.392 1.00 36.51 C
ATOM 22 N3 A A 27 39.497 7.632 9.773 1.00 34.61 N
ATOM 23 C4 A A 27 40.483 7.498 8.868 1.00 36.54 C
ATOM 24 P U A 28 40.151 14.609 8.066 1.00 35.23 P
ATOM 25 OP1 U A 28 40.127 15.041 6.643 1.00 35.80 O
ATOM 26 OP2 U A 28 41.323 14.942 8.913 1.00 34.93 O
ATOM 27 O5' U A 28 38.825 15.149 8.756 1.00 31.36 O
TER
ATOM 1 O3' A B 27 39.927 13.025 8.115 1.00 37.45 O
ATOM 2 P U B 28 40.151 14.609 8.066 1.00 35.23 P
ATOM 3 OP1 U B 28 40.127 15.041 6.643 1.00 35.80 O
ATOM 4 OP2 U B 28 41.323 14.942 8.913 1.00 34.93 O
ATOM 5 O5' U B 28 38.825 15.149 8.756 1.00 31.36 O
ATOM 6 C5' U B 28 37.562 14.955 8.138 1.00 28.65 C
ATOM 7 C4' U B 28 36.460 15.343 9.086 1.00 29.10 C
ATOM 8 O4' U B 28 36.271 14.299 10.076 1.00 28.39 O
ATOM 9 C3' U B 28 36.742 16.592 9.906 1.00 27.35 C
ATOM 10 O3' U B 28 36.441 17.774 9.177 1.00 26.44 O
ATOM 11 C2' U B 28 35.827 16.397 11.106 1.00 23.95 C
ATOM 12 O2' U B 28 34.487 16.745 10.835 1.00 25.62 O
ATOM 13 C1' U B 28 35.944 14.887 11.327 1.00 24.75 C
ATOM 14 N1 U B 28 37.005 14.540 12.283 1.00 24.39 N
ATOM 15 C2 U B 28 36.764 14.791 13.618 1.00 23.70 C
ATOM 16 O2 U B 28 35.725 15.284 14.014 1.00 25.43 O
ATOM 17 N3 U B 28 37.781 14.438 14.469 1.00 23.43 N
ATOM 18 C4 U B 28 38.990 13.871 14.128 1.00 24.89 C
ATOM 19 O4 U B 28 39.800 13.587 15.013 1.00 21.56 O
ATOM 20 C5 U B 28 39.166 13.646 12.723 1.00 24.89 C
ATOM 21 C6 U B 28 38.190 13.983 11.871 1.00 21.42 C
ATOM 22 P C B 29 37.268 19.118 9.475 1.00 25.62 P
ATOM 23 OP1 C B 29 36.862 20.141 8.474 1.00 24.70 O
ATOM 24 OP2 C B 29 38.703 18.749 9.614 1.00 22.80 O
ATOM 25 O5' C B 29 36.766 19.562 10.924 1.00 22.94 O
TER
ATOM 2 P A A 27 44.501 10.617 5.628 1.00 80.94 P
ATOM 3 OP1 A A 27 45.132 9.628 6.547 1.00 80.82 O
ATOM 4 OP2 A A 27 44.207 10.236 4.217 1.00 81.09 O
ATOM 5 O5' A A 27 43.151 11.124 6.317 1.00 72.24 O
ATOM 6 C5' A A 27 42.035 11.548 5.532 1.00 59.28 C
ATOM 7 C4' A A 27 40.763 11.540 6.360 1.00 49.42 C
ATOM 8 O4' A A 27 40.314 10.179 6.575 1.00 45.87 O
ATOM 9 C3' A A 27 40.972 12.135 7.746 1.00 43.63 C
ATOM 10 O3' A A 27 39.927 13.025 8.115 1.00 37.45 O
ATOM 11 C2' A A 27 41.171 10.948 8.689 1.00 41.94 C
ATOM 12 O2' A A 27 40.462 11.128 9.899 1.00 41.65 O
ATOM 13 C1' A A 27 40.457 9.829 7.932 1.00 41.83 C
ATOM 14 N9 A A 27 40.974 8.465 8.026 1.00 38.87 N
ATOM 15 C8 A A 27 41.975 7.862 7.305 1.00 37.48 C
ATOM 16 N7 A A 27 42.143 6.592 7.594 1.00 35.94 N
ATOM 17 C5 A A 27 41.199 6.348 8.582 1.00 35.11 C
ATOM 18 C6 A A 27 40.866 5.193 9.305 1.00 34.23 C
ATOM 19 N6 A A 27 41.471 4.012 9.135 1.00 33.55 N
ATOM 20 N1 A A 27 39.877 5.290 10.222 1.00 35.07 N
ATOM 21 C2 A A 27 39.272 6.475 10.392 1.00 36.51 C
ATOM 22 N3 A A 27 39.497 7.632 9.773 1.00 34.61 N
ATOM 23 C4 A A 27 40.483 7.498 8.868 1.00 36.54 C
ATOM 24 P U A 28 40.151 14.609 8.066 1.00 35.23 P
ATOM 25 OP1 U A 28 40.127 15.041 6.643 1.00 35.80 O
ATOM 26 OP2 U A 28 41.323 14.942 8.913 1.00 34.93 O
ATOM 27 O5' U A 28 38.825 15.149 8.756 1.00 31.36 O
TER
ATOM 1 O3' A B 27 39.927 13.025 8.115 1.00 37.45 O
ATOM 2 P U B 28 40.151 14.609 8.066 1.00 35.23 P
ATOM 3 OP1 U B 28 40.127 15.041 6.643 1.00 35.80 O
ATOM 4 OP2 U B 28 41.323 14.942 8.913 1.00 34.93 O
ATOM 5 O5' U B 28 38.825 15.149 8.756 1.00 31.36 O
ATOM 6 C5' U B 28 37.562 14.955 8.138 1.00 28.65 C
ATOM 7 C4' U B 28 36.460 15.343 9.086 1.00 29.10 C
ATOM 8 O4' U B 28 36.271 14.299 10.076 1.00 28.39 O
ATOM 9 C3' U B 28 36.742 16.592 9.906 1.00 27.35 C
ATOM 10 O3' U B 28 36.441 17.774 9.177 1.00 26.44 O
ATOM 11 C2' U B 28 35.827 16.397 11.106 1.00 23.95 C
ATOM 12 O2' U B 28 34.487 16.745 10.835 1.00 25.62 O
ATOM 13 C1' U B 28 35.944 14.887 11.327 1.00 24.75 C
ATOM 14 N1 U B 28 37.005 14.540 12.283 1.00 24.39 N
ATOM 15 C2 U B 28 36.764 14.791 13.618 1.00 23.70 C
ATOM 16 O2 U B 28 35.725 15.284 14.014 1.00 25.43 O
ATOM 17 N3 U B 28 37.781 14.438 14.469 1.00 23.43 N
ATOM 18 C4 U B 28 38.990 13.871 14.128 1.00 24.89 C
ATOM 19 O4 U B 28 39.800 13.587 15.013 1.00 21.56 O
ATOM 20 C5 U B 28 39.166 13.646 12.723 1.00 24.89 C
ATOM 21 C6 U B 28 38.190 13.983 11.871 1.00 21.42 C
ATOM 22 P C B 29 37.268 19.118 9.475 1.00 25.62 P
ATOM 23 OP1 C B 29 36.862 20.141 8.474 1.00 24.70 O
ATOM 24 OP2 C B 29 38.703 18.749 9.614 1.00 22.80 O
ATOM 25 O5' C B 29 36.766 19.562 10.924 1.00 22.94 O
TER
Atoms:
OP1: (45.132,9.628,6.547)
OP2: (44.207,10.236,4.217)
C3': (40.972,12.135,7.746)
C1': (40.457,9.829,7.932)
C5': (42.035,11.548,5.532)
O4': (40.314,10.179,6.575)
C8: (41.975,7.862,7.305)
O2': (40.462,11.128,9.899)
C6: (40.866,5.193,9.305)
C5: (41.199,6.348,8.582)
C4: (40.483,7.498,8.868)
P: (44.501,10.617,5.628)
C4': (40.763,11.540,6.360)
C2': (41.171,10.948,8.689)
C2: (39.272,6.475,10.392)
N1: (39.877,5.290,10.222)
N3: (39.497,7.632,9.773)
N6: (41.471,4.012,9.135)
N7: (42.143,6.592,7.594)
N9: (40.974,8.465,8.026)
O5': (43.151,11.124,6.317)
O3': (39.927,13.025,8.115)
OP2: (44.207,10.236,4.217)
C3': (40.972,12.135,7.746)
C1': (40.457,9.829,7.932)
C5': (42.035,11.548,5.532)
O4': (40.314,10.179,6.575)
C8: (41.975,7.862,7.305)
O2': (40.462,11.128,9.899)
C6: (40.866,5.193,9.305)
C5: (41.199,6.348,8.582)
C4: (40.483,7.498,8.868)
P: (44.501,10.617,5.628)
C4': (40.763,11.540,6.360)
C2': (41.171,10.948,8.689)
C2: (39.272,6.475,10.392)
N1: (39.877,5.290,10.222)
N3: (39.497,7.632,9.773)
N6: (41.471,4.012,9.135)
N7: (42.143,6.592,7.594)
N9: (40.974,8.465,8.026)
O5': (43.151,11.124,6.317)
O3': (39.927,13.025,8.115)
C4: (38.990,13.871,14.128)
N3: (37.781,14.438,14.469)
OP1: (40.127,15.041,6.643)
OP2: (41.323,14.942,8.913)
C2: (36.764,14.791,13.618)
C1': (35.944,14.887,11.327)
C3': (36.742,16.592,9.906)
O5': (38.825,15.149,8.756)
O4': (36.271,14.299,10.076)
C5': (37.562,14.955,8.138)
P: (40.151,14.609,8.066)
C4': (36.460,15.343,9.086)
C2': (35.827,16.397,11.106)
O2': (34.487,16.745,10.835)
N1: (37.005,14.540,12.283)
O4: (39.800,13.587,15.013)
O2: (35.725,15.284,14.014)
C6: (38.190,13.983,11.871)
C5: (39.166,13.646,12.723)
O3': (36.441,17.774,9.177)
N3: (37.781,14.438,14.469)
OP1: (40.127,15.041,6.643)
OP2: (41.323,14.942,8.913)
C2: (36.764,14.791,13.618)
C1': (35.944,14.887,11.327)
C3': (36.742,16.592,9.906)
O5': (38.825,15.149,8.756)
O4': (36.271,14.299,10.076)
C5': (37.562,14.955,8.138)
P: (40.151,14.609,8.066)
C4': (36.460,15.343,9.086)
C2': (35.827,16.397,11.106)
O2': (34.487,16.745,10.835)
N1: (37.005,14.540,12.283)
O4: (39.800,13.587,15.013)
O2: (35.725,15.284,14.014)
C6: (38.190,13.983,11.871)
C5: (39.166,13.646,12.723)
O3': (36.441,17.774,9.177)
Image (generated by PyMOL):