ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2H0S:B27:B28

Extra

PDB:
ATOM 1 O3' U A 26 45.052 13.122 5.603 1.00 81.31 O
ATOM 2 P A A 27 43.789 12.960 4.621 1.00 78.14 P
ATOM 3 OP1 A A 27 43.970 11.716 3.823 1.00 79.35 O
ATOM 4 OP2 A A 27 43.640 14.259 3.917 1.00 80.07 O
ATOM 5 O5' A A 27 42.528 12.763 5.583 1.00 71.98 O
ATOM 6 C5' A A 27 41.205 12.959 5.077 1.00 61.72 C
ATOM 7 C4' A A 27 40.169 12.923 6.189 1.00 55.98 C
ATOM 8 O4' A A 27 39.818 11.556 6.515 1.00 50.71 O
ATOM 9 C3' A A 27 40.663 13.554 7.487 1.00 51.49 C
ATOM 10 O3' A A 27 39.682 14.415 8.063 1.00 46.12 O
ATOM 11 C2' A A 27 41.108 12.384 8.373 1.00 47.67 C
ATOM 12 O2' A A 27 40.704 12.551 9.715 1.00 48.48 O
ATOM 13 C1' A A 27 40.254 11.245 7.818 1.00 42.47 C
ATOM 14 N9 A A 27 40.733 9.868 7.853 1.00 41.07 N
ATOM 15 C8 A A 27 41.639 9.240 7.040 1.00 36.92 C
ATOM 16 N7 A A 27 41.785 7.968 7.300 1.00 31.63 N
ATOM 17 C5 A A 27 40.927 7.744 8.370 1.00 32.97 C
ATOM 18 C6 A A 27 40.612 6.588 9.112 1.00 31.93 C
ATOM 19 N6 A A 27 41.147 5.387 8.873 1.00 27.66 N
ATOM 20 N1 A A 27 39.715 6.710 10.117 1.00 33.95 N
ATOM 21 C2 A A 27 39.175 7.911 10.349 1.00 32.80 C
ATOM 22 N3 A A 27 39.387 9.064 9.721 1.00 39.15 N
ATOM 23 C4 A A 27 40.285 8.909 8.729 1.00 35.26 C
ATOM 24 P U A 28 39.878 16.003 8.040 1.00 44.91 P
ATOM 25 OP1 U A 28 39.763 16.491 6.641 1.00 49.37 O
ATOM 26 OP2 U A 28 41.096 16.312 8.828 1.00 44.44 O
ATOM 27 O5' U A 28 38.594 16.515 8.823 1.00 43.72 O
TER

ATOM 1 O3' A B 27 39.682 14.415 8.063 1.00 46.12 O
ATOM 2 P U B 28 39.878 16.003 8.040 1.00 44.91 P
ATOM 3 OP1 U B 28 39.763 16.491 6.641 1.00 49.37 O
ATOM 4 OP2 U B 28 41.096 16.312 8.828 1.00 44.44 O
ATOM 5 O5' U B 28 38.594 16.515 8.823 1.00 43.72 O
ATOM 6 C5' U B 28 37.318 16.511 8.199 1.00 37.82 C
ATOM 7 C4' U B 28 36.244 16.794 9.216 1.00 35.41 C
ATOM 8 O4' U B 28 36.177 15.685 10.146 1.00 37.05 O
ATOM 9 C3' U B 28 36.484 18.005 10.108 1.00 36.82 C
ATOM 10 O3' U B 28 36.056 19.202 9.470 1.00 32.11 O
ATOM 11 C2' U B 28 35.625 17.667 11.319 1.00 34.22 C
ATOM 12 O2' U B 28 34.249 17.843 11.070 1.00 37.71 O
ATOM 13 C1' U B 28 35.879 16.169 11.447 1.00 33.41 C
ATOM 14 N1 U B 28 37.003 15.848 12.335 1.00 24.23 N
ATOM 15 C2 U B 28 36.809 16.028 13.684 1.00 23.57 C
ATOM 16 O2 U B 28 35.758 16.441 14.137 1.00 23.34 O
ATOM 17 N3 U B 28 37.887 15.708 14.478 1.00 16.09 N
ATOM 18 C4 U B 28 39.118 15.234 14.049 1.00 25.80 C
ATOM 19 O4 U B 28 39.995 14.983 14.873 1.00 26.95 O
ATOM 20 C5 U B 28 39.237 15.077 12.627 1.00 25.75 C
ATOM 21 C6 U B 28 38.202 15.383 11.842 1.00 27.38 C
ATOM 22 P C B 29 36.900 20.550 9.662 1.00 35.10 P
ATOM 23 OP1 C B 29 36.409 21.550 8.681 1.00 33.90 O
ATOM 24 OP2 C B 29 38.339 20.202 9.684 1.00 30.39 O
ATOM 25 O5' C B 29 36.472 21.022 11.124 1.00 38.26 O
TER

Atoms:
OP1: (43.970,11.716,3.823)
OP2: (43.640,14.259,3.917)
C3': (40.663,13.554,7.487)
C1': (40.254,11.245,7.818)
C5': (41.205,12.959,5.077)
O4': (39.818,11.556,6.515)
C8: (41.639,9.240,7.040)
O2': (40.704,12.551,9.715)
C6: (40.612,6.588,9.112)
C5: (40.927,7.744,8.370)
C4: (40.285,8.909,8.729)
P: (43.789,12.960,4.621)
C4': (40.169,12.923,6.189)
C2': (41.108,12.384,8.373)
C2: (39.175,7.911,10.349)
N1: (39.715,6.710,10.117)
N3: (39.387,9.064,9.721)
N6: (41.147,5.387,8.873)
N7: (41.785,7.968,7.300)
N9: (40.733,9.868,7.853)
O5': (42.528,12.763,5.583)
O3': (39.682,14.415,8.063)
C4: (39.118,15.234,14.049)
N3: (37.887,15.708,14.478)
OP1: (39.763,16.491,6.641)
OP2: (41.096,16.312,8.828)
C2: (36.809,16.028,13.684)
C1': (35.879,16.169,11.447)
C3': (36.484,18.005,10.108)
O5': (38.594,16.515,8.823)
O4': (36.177,15.685,10.146)
C5': (37.318,16.511,8.199)
P: (39.878,16.003,8.040)
C4': (36.244,16.794,9.216)
C2': (35.625,17.667,11.319)
O2': (34.249,17.843,11.070)
N1: (37.003,15.848,12.335)
O4: (39.995,14.983,14.873)
O2: (35.758,16.441,14.137)
C6: (38.202,15.383,11.842)
C5: (39.237,15.077,12.627)
O3': (36.056,19.202,9.470)
Image (generated by PyMOL):
PyMOL image
show in jmol