Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0475:0500
Extra
PDB:
ATOM 1 O3' A A 474 21.316 163.818 51.228 1.00 51.98 O
ATOM 2 P G A 475 21.983 164.090 52.678 1.00 54.05 P
ATOM 3 OP1 G A 475 21.509 163.082 53.671 1.00 54.13 O
ATOM 4 OP2 G A 475 21.805 165.533 52.973 1.00 52.59 O
ATOM 5 O5' G A 475 23.537 163.846 52.435 1.00 51.79 O
ATOM 6 C5' G A 475 24.102 162.531 52.569 1.00 52.24 C
ATOM 7 C4' G A 475 24.705 162.371 53.945 1.00 51.85 C
ATOM 8 O4' G A 475 25.161 160.998 54.127 1.00 48.97 O
ATOM 9 C3' G A 475 25.918 163.259 54.225 1.00 51.48 C
ATOM 10 O3' G A 475 25.941 163.611 55.607 1.00 52.15 O
ATOM 11 C2' G A 475 27.075 162.323 53.916 1.00 49.63 C
ATOM 12 O2' G A 475 28.267 162.703 54.559 1.00 51.19 O
ATOM 13 C1' G A 475 26.526 161.014 54.477 1.00 49.00 C
ATOM 14 N9 G A 475 27.161 159.784 54.010 1.00 46.59 N
ATOM 15 C8 G A 475 27.797 159.558 52.811 1.00 45.35 C
ATOM 16 N7 G A 475 28.322 158.367 52.730 1.00 44.70 N
ATOM 17 C5 G A 475 28.002 157.768 53.944 1.00 45.05 C
ATOM 18 C6 G A 475 28.317 156.476 54.447 1.00 45.91 C
ATOM 19 O6 G A 475 28.982 155.581 53.908 1.00 47.59 O
ATOM 20 N1 G A 475 27.779 156.275 55.717 1.00 43.47 N
ATOM 21 C2 G A 475 27.042 157.201 56.415 1.00 44.09 C
ATOM 22 N2 G A 475 26.596 156.827 57.625 1.00 43.72 N
ATOM 23 N3 G A 475 26.758 158.409 55.962 1.00 44.58 N
ATOM 24 C4 G A 475 27.266 158.622 54.731 1.00 44.33 C
ATOM 25 P U A 476 26.587 165.008 56.073 1.00 53.35 P
ATOM 26 OP1 U A 476 27.014 165.766 54.870 1.00 53.00 O
ATOM 27 OP2 U A 476 27.582 164.714 57.134 1.00 55.00 O
ATOM 28 O5' U A 476 25.373 165.758 56.779 1.00 53.28 O
TER
ATOM 1 O3' A B 499 23.571 152.177 62.290 1.00 53.22 O
ATOM 2 P G B 500 23.717 153.486 63.210 1.00 51.49 P
ATOM 3 OP1 G B 500 24.826 153.239 64.159 1.00 50.40 O
ATOM 4 OP2 G B 500 22.377 153.866 63.738 1.00 49.03 O
ATOM 5 O5' G B 500 24.187 154.605 62.184 1.00 49.16 O
ATOM 6 C5' G B 500 25.336 154.401 61.349 1.00 51.10 C
ATOM 7 C4' G B 500 26.154 155.668 61.276 1.00 51.50 C
ATOM 8 O4' G B 500 25.395 156.697 60.584 1.00 51.26 O
ATOM 9 C3' G B 500 26.534 156.265 62.629 1.00 52.52 C
ATOM 10 O3' G B 500 27.771 156.950 62.495 1.00 54.86 O
ATOM 11 C2' G B 500 25.421 157.278 62.861 1.00 52.54 C
ATOM 12 O2' G B 500 25.782 158.310 63.759 1.00 50.00 O
ATOM 13 C1' G B 500 25.221 157.809 61.442 1.00 52.77 C
ATOM 14 N9 G B 500 23.921 158.419 61.168 1.00 54.20 N
ATOM 15 C8 G B 500 22.828 158.477 62.001 1.00 53.89 C
ATOM 16 N7 G B 500 21.827 159.135 61.484 1.00 55.48 N
ATOM 17 C5 G B 500 22.280 159.526 60.230 1.00 54.98 C
ATOM 18 C6 G B 500 21.633 160.271 59.211 1.00 54.69 C
ATOM 19 O6 G B 500 20.505 160.765 59.222 1.00 53.47 O
ATOM 20 N1 G B 500 22.447 160.422 58.094 1.00 54.39 N
ATOM 21 C2 G B 500 23.722 159.927 57.974 1.00 54.45 C
ATOM 22 N2 G B 500 24.349 160.162 56.815 1.00 54.86 N
ATOM 23 N3 G B 500 24.340 159.247 58.921 1.00 55.29 N
ATOM 24 C4 G B 500 23.564 159.082 60.014 1.00 54.80 C
ATOM 25 P A B 501 28.913 156.781 63.611 1.00 55.28 P
ATOM 26 OP1 A B 501 28.503 155.752 64.605 1.00 54.65 O
ATOM 27 OP2 A B 501 29.262 158.147 64.068 1.00 56.25 O
ATOM 28 O5' A B 501 30.141 156.204 62.784 1.00 56.20 O
TER
ATOM 2 P G A 475 21.983 164.090 52.678 1.00 54.05 P
ATOM 3 OP1 G A 475 21.509 163.082 53.671 1.00 54.13 O
ATOM 4 OP2 G A 475 21.805 165.533 52.973 1.00 52.59 O
ATOM 5 O5' G A 475 23.537 163.846 52.435 1.00 51.79 O
ATOM 6 C5' G A 475 24.102 162.531 52.569 1.00 52.24 C
ATOM 7 C4' G A 475 24.705 162.371 53.945 1.00 51.85 C
ATOM 8 O4' G A 475 25.161 160.998 54.127 1.00 48.97 O
ATOM 9 C3' G A 475 25.918 163.259 54.225 1.00 51.48 C
ATOM 10 O3' G A 475 25.941 163.611 55.607 1.00 52.15 O
ATOM 11 C2' G A 475 27.075 162.323 53.916 1.00 49.63 C
ATOM 12 O2' G A 475 28.267 162.703 54.559 1.00 51.19 O
ATOM 13 C1' G A 475 26.526 161.014 54.477 1.00 49.00 C
ATOM 14 N9 G A 475 27.161 159.784 54.010 1.00 46.59 N
ATOM 15 C8 G A 475 27.797 159.558 52.811 1.00 45.35 C
ATOM 16 N7 G A 475 28.322 158.367 52.730 1.00 44.70 N
ATOM 17 C5 G A 475 28.002 157.768 53.944 1.00 45.05 C
ATOM 18 C6 G A 475 28.317 156.476 54.447 1.00 45.91 C
ATOM 19 O6 G A 475 28.982 155.581 53.908 1.00 47.59 O
ATOM 20 N1 G A 475 27.779 156.275 55.717 1.00 43.47 N
ATOM 21 C2 G A 475 27.042 157.201 56.415 1.00 44.09 C
ATOM 22 N2 G A 475 26.596 156.827 57.625 1.00 43.72 N
ATOM 23 N3 G A 475 26.758 158.409 55.962 1.00 44.58 N
ATOM 24 C4 G A 475 27.266 158.622 54.731 1.00 44.33 C
ATOM 25 P U A 476 26.587 165.008 56.073 1.00 53.35 P
ATOM 26 OP1 U A 476 27.014 165.766 54.870 1.00 53.00 O
ATOM 27 OP2 U A 476 27.582 164.714 57.134 1.00 55.00 O
ATOM 28 O5' U A 476 25.373 165.758 56.779 1.00 53.28 O
TER
ATOM 1 O3' A B 499 23.571 152.177 62.290 1.00 53.22 O
ATOM 2 P G B 500 23.717 153.486 63.210 1.00 51.49 P
ATOM 3 OP1 G B 500 24.826 153.239 64.159 1.00 50.40 O
ATOM 4 OP2 G B 500 22.377 153.866 63.738 1.00 49.03 O
ATOM 5 O5' G B 500 24.187 154.605 62.184 1.00 49.16 O
ATOM 6 C5' G B 500 25.336 154.401 61.349 1.00 51.10 C
ATOM 7 C4' G B 500 26.154 155.668 61.276 1.00 51.50 C
ATOM 8 O4' G B 500 25.395 156.697 60.584 1.00 51.26 O
ATOM 9 C3' G B 500 26.534 156.265 62.629 1.00 52.52 C
ATOM 10 O3' G B 500 27.771 156.950 62.495 1.00 54.86 O
ATOM 11 C2' G B 500 25.421 157.278 62.861 1.00 52.54 C
ATOM 12 O2' G B 500 25.782 158.310 63.759 1.00 50.00 O
ATOM 13 C1' G B 500 25.221 157.809 61.442 1.00 52.77 C
ATOM 14 N9 G B 500 23.921 158.419 61.168 1.00 54.20 N
ATOM 15 C8 G B 500 22.828 158.477 62.001 1.00 53.89 C
ATOM 16 N7 G B 500 21.827 159.135 61.484 1.00 55.48 N
ATOM 17 C5 G B 500 22.280 159.526 60.230 1.00 54.98 C
ATOM 18 C6 G B 500 21.633 160.271 59.211 1.00 54.69 C
ATOM 19 O6 G B 500 20.505 160.765 59.222 1.00 53.47 O
ATOM 20 N1 G B 500 22.447 160.422 58.094 1.00 54.39 N
ATOM 21 C2 G B 500 23.722 159.927 57.974 1.00 54.45 C
ATOM 22 N2 G B 500 24.349 160.162 56.815 1.00 54.86 N
ATOM 23 N3 G B 500 24.340 159.247 58.921 1.00 55.29 N
ATOM 24 C4 G B 500 23.564 159.082 60.014 1.00 54.80 C
ATOM 25 P A B 501 28.913 156.781 63.611 1.00 55.28 P
ATOM 26 OP1 A B 501 28.503 155.752 64.605 1.00 54.65 O
ATOM 27 OP2 A B 501 29.262 158.147 64.068 1.00 56.25 O
ATOM 28 O5' A B 501 30.141 156.204 62.784 1.00 56.20 O
TER
Atoms:
OP1: (21.509,163.082,53.671)
OP2: (21.805,165.533,52.973)
C3': (25.918,163.259,54.225)
C1': (26.526,161.014,54.477)
C5': (24.102,162.531,52.569)
O6: (28.982,155.581,53.908)
O4': (25.161,160.998,54.127)
C8: (27.797,159.558,52.811)
C2: (27.042,157.201,56.415)
C6: (28.317,156.476,54.447)
C5: (28.002,157.768,53.944)
C4: (27.266,158.622,54.731)
P: (21.983,164.090,52.678)
C4': (24.705,162.371,53.945)
C2': (27.075,162.323,53.916)
O2': (28.267,162.703,54.559)
N1: (27.779,156.275,55.717)
N2: (26.596,156.827,57.625)
N3: (26.758,158.409,55.962)
N7: (28.322,158.367,52.730)
N9: (27.161,159.784,54.010)
O5': (23.537,163.846,52.435)
O3': (25.941,163.611,55.607)
OP2: (21.805,165.533,52.973)
C3': (25.918,163.259,54.225)
C1': (26.526,161.014,54.477)
C5': (24.102,162.531,52.569)
O6: (28.982,155.581,53.908)
O4': (25.161,160.998,54.127)
C8: (27.797,159.558,52.811)
C2: (27.042,157.201,56.415)
C6: (28.317,156.476,54.447)
C5: (28.002,157.768,53.944)
C4: (27.266,158.622,54.731)
P: (21.983,164.090,52.678)
C4': (24.705,162.371,53.945)
C2': (27.075,162.323,53.916)
O2': (28.267,162.703,54.559)
N1: (27.779,156.275,55.717)
N2: (26.596,156.827,57.625)
N3: (26.758,158.409,55.962)
N7: (28.322,158.367,52.730)
N9: (27.161,159.784,54.010)
O5': (23.537,163.846,52.435)
O3': (25.941,163.611,55.607)
OP1: (24.826,153.239,64.159)
OP2: (22.377,153.866,63.738)
C3': (26.534,156.265,62.629)
C1': (25.221,157.809,61.442)
C5': (25.336,154.401,61.349)
O6: (20.505,160.765,59.222)
O4': (25.395,156.697,60.584)
C8: (22.828,158.477,62.001)
C2: (23.722,159.927,57.974)
C6: (21.633,160.271,59.211)
C5: (22.280,159.526,60.230)
C4: (23.564,159.082,60.014)
P: (23.717,153.486,63.210)
C4': (26.154,155.668,61.276)
C2': (25.421,157.278,62.861)
O2': (25.782,158.310,63.759)
N1: (22.447,160.422,58.094)
N2: (24.349,160.162,56.815)
N3: (24.340,159.247,58.921)
N7: (21.827,159.135,61.484)
N9: (23.921,158.419,61.168)
O5': (24.187,154.605,62.184)
O3': (27.771,156.950,62.495)
OP2: (22.377,153.866,63.738)
C3': (26.534,156.265,62.629)
C1': (25.221,157.809,61.442)
C5': (25.336,154.401,61.349)
O6: (20.505,160.765,59.222)
O4': (25.395,156.697,60.584)
C8: (22.828,158.477,62.001)
C2: (23.722,159.927,57.974)
C6: (21.633,160.271,59.211)
C5: (22.280,159.526,60.230)
C4: (23.564,159.082,60.014)
P: (23.717,153.486,63.210)
C4': (26.154,155.668,61.276)
C2': (25.421,157.278,62.861)
O2': (25.782,158.310,63.759)
N1: (22.447,160.422,58.094)
N2: (24.349,160.162,56.815)
N3: (24.340,159.247,58.921)
N7: (21.827,159.135,61.484)
N9: (23.921,158.419,61.168)
O5': (24.187,154.605,62.184)
O3': (27.771,156.950,62.495)
Image (generated by PyMOL):