ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2H0Z:B27:B28

Extra

PDB:
ATOM 1 O3' U A 26 45.579 11.971 5.088 1.00 65.52 O
ATOM 2 P A A 27 44.735 10.610 5.226 1.00 59.19 P
ATOM 3 OP1 A A 27 45.489 9.727 6.148 1.00 60.63 O
ATOM 4 OP2 A A 27 44.434 10.140 3.846 1.00 60.25 O
ATOM 5 O5' A A 27 43.383 11.014 5.966 1.00 54.59 O
ATOM 6 C5' A A 27 42.225 11.364 5.222 1.00 47.03 C
ATOM 7 C4' A A 27 40.990 11.358 6.100 1.00 42.14 C
ATOM 8 O4' A A 27 40.578 9.990 6.368 1.00 40.80 O
ATOM 9 C3' A A 27 41.255 11.993 7.466 1.00 38.65 C
ATOM 10 O3' A A 27 40.270 12.942 7.855 1.00 34.50 O
ATOM 11 C2' A A 27 41.473 10.835 8.440 1.00 38.53 C
ATOM 12 O2' A A 27 40.770 11.031 9.646 1.00 37.95 O
ATOM 13 C1' A A 27 40.726 9.709 7.739 1.00 39.43 C
ATOM 14 N9 A A 27 41.108 8.314 7.947 1.00 39.85 N
ATOM 15 C8 A A 27 42.033 7.532 7.304 1.00 39.97 C
ATOM 16 N7 A A 27 42.061 6.290 7.731 1.00 39.46 N
ATOM 17 C5 A A 27 41.097 6.258 8.731 1.00 39.25 C
ATOM 18 C6 A A 27 40.638 5.231 9.584 1.00 39.59 C
ATOM 19 N6 A A 27 41.105 3.979 9.572 1.00 38.01 N
ATOM 20 N1 A A 27 39.667 5.544 10.470 1.00 40.26 N
ATOM 21 C2 A A 27 39.200 6.801 10.495 1.00 39.90 C
ATOM 22 N3 A A 27 39.551 7.844 9.754 1.00 38.46 N
ATOM 23 C4 A A 27 40.513 7.501 8.881 1.00 39.13 C
ATOM 24 P U A 28 40.590 14.513 7.824 1.00 32.22 P
ATOM 25 OP1 U A 28 40.617 14.939 6.401 1.00 32.58 O
ATOM 26 OP2 U A 28 41.759 14.797 8.701 1.00 30.28 O
ATOM 27 O5' U A 28 39.289 15.140 8.489 1.00 29.99 O
TER

ATOM 1 O3' A B 27 40.270 12.942 7.855 1.00 34.50 O
ATOM 2 P U B 28 40.590 14.513 7.824 1.00 32.22 P
ATOM 3 OP1 U B 28 40.617 14.939 6.401 1.00 32.58 O
ATOM 4 OP2 U B 28 41.759 14.797 8.701 1.00 30.28 O
ATOM 5 O5' U B 28 39.289 15.140 8.489 1.00 29.99 O
ATOM 6 C5' U B 28 38.021 15.009 7.862 1.00 27.27 C
ATOM 7 C4' U B 28 36.922 15.371 8.829 1.00 26.71 C
ATOM 8 O4' U B 28 36.765 14.324 9.818 1.00 26.06 O
ATOM 9 C3' U B 28 37.166 16.616 9.662 1.00 25.93 C
ATOM 10 O3' U B 28 36.847 17.794 8.941 1.00 25.81 O
ATOM 11 C2' U B 28 36.225 16.395 10.835 1.00 24.64 C
ATOM 12 O2' U B 28 34.884 16.674 10.521 1.00 24.68 O
ATOM 13 C1' U B 28 36.380 14.895 11.062 1.00 24.39 C
ATOM 14 N1 U B 28 37.425 14.606 12.051 1.00 23.71 N
ATOM 15 C2 U B 28 37.157 14.921 13.374 1.00 22.84 C
ATOM 16 O2 U B 28 36.093 15.386 13.735 1.00 22.38 O
ATOM 17 N3 U B 28 38.184 14.673 14.253 1.00 22.38 N
ATOM 18 C4 U B 28 39.426 14.141 13.950 1.00 24.17 C
ATOM 19 O4 U B 28 40.252 13.982 14.848 1.00 23.22 O
ATOM 20 C5 U B 28 39.621 13.823 12.558 1.00 24.27 C
ATOM 21 C6 U B 28 38.636 14.059 11.681 1.00 23.50 C
ATOM 22 P C B 29 37.630 19.153 9.270 1.00 26.60 P
ATOM 23 OP1 C B 29 37.196 20.180 8.281 1.00 26.91 O
ATOM 24 OP2 C B 29 39.064 18.810 9.389 1.00 24.73 O
ATOM 25 O5' C B 29 37.072 19.572 10.700 1.00 25.01 O
TER

Atoms:
OP1: (45.489,9.727,6.148)
OP2: (44.434,10.140,3.846)
C3': (41.255,11.993,7.466)
C1': (40.726,9.709,7.739)
C5': (42.225,11.364,5.222)
O4': (40.578,9.990,6.368)
C8: (42.033,7.532,7.304)
O2': (40.770,11.031,9.646)
C6: (40.638,5.231,9.584)
C5: (41.097,6.258,8.731)
C4: (40.513,7.501,8.881)
P: (44.735,10.610,5.226)
C4': (40.990,11.358,6.100)
C2': (41.473,10.835,8.440)
C2: (39.200,6.801,10.495)
N1: (39.667,5.544,10.470)
N3: (39.551,7.844,9.754)
N6: (41.105,3.979,9.572)
N7: (42.061,6.290,7.731)
N9: (41.108,8.314,7.947)
O5': (43.383,11.014,5.966)
O3': (40.270,12.942,7.855)
C4: (39.426,14.141,13.950)
N3: (38.184,14.673,14.253)
OP1: (40.617,14.939,6.401)
OP2: (41.759,14.797,8.701)
C2: (37.157,14.921,13.374)
C1': (36.380,14.895,11.062)
C3': (37.166,16.616,9.662)
O5': (39.289,15.140,8.489)
O4': (36.765,14.324,9.818)
C5': (38.021,15.009,7.862)
P: (40.590,14.513,7.824)
C4': (36.922,15.371,8.829)
C2': (36.225,16.395,10.835)
O2': (34.884,16.674,10.521)
N1: (37.425,14.606,12.051)
O4: (40.252,13.982,14.848)
O2: (36.093,15.386,13.735)
C6: (38.636,14.059,11.681)
C5: (39.621,13.823,12.558)
O3': (36.847,17.794,8.941)
Image (generated by PyMOL):
PyMOL image
show in jmol