ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HO6:B27:B28

Extra

PDB:
ATOM 1 O3' U A 26 45.597 12.642 5.877 1.00 43.65 O
ATOM 2 P A A 27 44.918 11.271 6.369 1.00 41.97 P
ATOM 3 OP1 A A 27 45.520 10.848 7.666 1.00 40.81 O
ATOM 4 OP2 A A 27 44.951 10.344 5.207 1.00 43.09 O
ATOM 5 O5' A A 27 43.403 11.684 6.647 1.00 38.21 O
ATOM 6 C5' A A 27 42.655 12.431 5.687 1.00 32.06 C
ATOM 7 C4' A A 27 41.204 12.471 6.092 1.00 27.14 C
ATOM 8 O4' A A 27 40.682 11.123 6.104 1.00 26.24 O
ATOM 9 C3' A A 27 41.040 13.004 7.505 1.00 24.76 C
ATOM 10 O3' A A 27 39.944 13.910 7.586 1.00 24.56 O
ATOM 11 C2' A A 27 40.941 11.773 8.401 1.00 23.69 C
ATOM 12 O2' A A 27 39.942 11.913 9.378 1.00 24.62 O
ATOM 13 C1' A A 27 40.436 10.712 7.427 1.00 24.09 C
ATOM 14 N9 A A 27 40.885 9.332 7.591 1.00 22.58 N
ATOM 15 C8 A A 27 41.799 8.634 6.845 1.00 21.75 C
ATOM 16 N7 A A 27 41.916 7.378 7.196 1.00 21.13 N
ATOM 17 C5 A A 27 41.034 7.247 8.257 1.00 21.87 C
ATOM 18 C6 A A 27 40.690 6.159 9.065 1.00 21.98 C
ATOM 19 N6 A A 27 41.209 4.940 8.923 1.00 24.06 N
ATOM 20 N1 A A 27 39.781 6.364 10.038 1.00 24.03 N
ATOM 21 C2 A A 27 39.259 7.585 10.180 1.00 25.22 C
ATOM 22 N3 A A 27 39.500 8.687 9.481 1.00 24.17 N
ATOM 23 C4 A A 27 40.407 8.446 8.522 1.00 22.55 C
ATOM 24 P U A 28 40.163 15.419 8.073 1.00 22.19 P
ATOM 25 OP1 U A 28 40.209 16.298 6.873 1.00 22.70 O
ATOM 26 OP2 U A 28 41.293 15.417 9.037 1.00 22.42 O
ATOM 27 O5' U A 28 38.816 15.746 8.851 1.00 21.12 O
TER

ATOM 1 O3' A B 27 39.944 13.910 7.586 1.00 24.56 O
ATOM 2 P U B 28 40.163 15.419 8.073 1.00 22.19 P
ATOM 3 OP1 U B 28 40.209 16.298 6.873 1.00 22.70 O
ATOM 4 OP2 U B 28 41.293 15.417 9.037 1.00 22.42 O
ATOM 5 O5' U B 28 38.816 15.746 8.851 1.00 21.12 O
ATOM 6 C5' U B 28 37.587 15.841 8.151 1.00 20.00 C
ATOM 7 C4' U B 28 36.481 16.235 9.099 1.00 20.67 C
ATOM 8 O4' U B 28 36.236 15.153 10.035 1.00 21.20 O
ATOM 9 C3' U B 28 36.796 17.422 9.990 1.00 20.00 C
ATOM 10 O3' U B 28 36.538 18.647 9.329 1.00 20.00 O
ATOM 11 C2' U B 28 35.844 17.204 11.147 1.00 20.00 C
ATOM 12 O2' U B 28 34.529 17.570 10.801 1.00 20.19 O
ATOM 13 C1' U B 28 35.921 15.688 11.309 1.00 20.00 C
ATOM 14 N1 U B 28 36.960 15.264 12.254 1.00 20.00 N
ATOM 15 C2 U B 28 36.749 15.528 13.586 1.00 20.00 C
ATOM 16 O2 U B 28 35.752 16.091 13.990 1.00 20.15 O
ATOM 17 N3 U B 28 37.749 15.109 14.429 1.00 20.02 N
ATOM 18 C4 U B 28 38.919 14.462 14.075 1.00 20.00 C
ATOM 19 O4 U B 28 39.731 14.136 14.955 1.00 20.00 O
ATOM 20 C5 U B 28 39.060 14.224 12.666 1.00 20.00 C
ATOM 21 C6 U B 28 38.100 14.625 11.827 1.00 20.00 C
ATOM 22 P C B 29 37.427 19.933 9.684 1.00 20.00 P
ATOM 23 OP1 C B 29 37.032 21.021 8.754 1.00 20.00 O
ATOM 24 OP2 C B 29 38.846 19.504 9.743 1.00 20.00 O
ATOM 25 O5' C B 29 36.936 20.296 11.156 1.00 20.07 O
TER

Atoms:
OP1: (45.520,10.848,7.666)
OP2: (44.951,10.344,5.207)
C3': (41.040,13.004,7.505)
C1': (40.436,10.712,7.427)
C5': (42.655,12.431,5.687)
O4': (40.682,11.123,6.104)
C8: (41.799,8.634,6.845)
O2': (39.942,11.913,9.378)
C6: (40.690,6.159,9.065)
C5: (41.034,7.247,8.257)
C4: (40.407,8.446,8.522)
P: (44.918,11.271,6.369)
C4': (41.204,12.471,6.092)
C2': (40.941,11.773,8.401)
C2: (39.259,7.585,10.180)
N1: (39.781,6.364,10.038)
N3: (39.500,8.687,9.481)
N6: (41.209,4.940,8.923)
N7: (41.916,7.378,7.196)
N9: (40.885,9.332,7.591)
O5': (43.403,11.684,6.647)
O3': (39.944,13.910,7.586)
C4: (38.919,14.462,14.075)
N3: (37.749,15.109,14.429)
OP1: (40.209,16.298,6.873)
OP2: (41.293,15.417,9.037)
C2: (36.749,15.528,13.586)
C1': (35.921,15.688,11.309)
C3': (36.796,17.422,9.990)
O5': (38.816,15.746,8.851)
O4': (36.236,15.153,10.035)
C5': (37.587,15.841,8.151)
P: (40.163,15.419,8.073)
C4': (36.481,16.235,9.099)
C2': (35.844,17.204,11.147)
O2': (34.529,17.570,10.801)
N1: (36.960,15.264,12.254)
O4: (39.731,14.136,14.955)
O2: (35.752,16.091,13.990)
C6: (38.100,14.625,11.827)
C5: (39.060,14.224,12.666)
O3': (36.538,18.647,9.329)
Image (generated by PyMOL):
PyMOL image
show in jmol