Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:022:0444
Extra
PDB:
ATOM 1 O3' C A 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 2 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G A 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G A 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G A 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G A 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G A 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G A 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G A 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G A 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G A 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G A 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G A 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G A 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G A 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G A 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G A 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G A 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G A 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G A 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G A 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G A 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G A 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G A 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G A 23 44.943 135.040 46.674 1.00 34.64 O
TER
ATOM 1 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 2 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 3 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 4 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 5 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
ATOM 6 C5' G B 444 42.354 126.595 54.931 1.00 25.10 C
ATOM 7 C4' G B 444 42.173 127.416 53.682 1.00 24.98 C
ATOM 8 O4' G B 444 41.431 128.637 53.979 1.00 27.13 O
ATOM 9 C3' G B 444 43.448 127.931 53.056 1.00 23.34 C
ATOM 10 O3' G B 444 44.123 126.931 52.311 1.00 23.79 O
ATOM 11 C2' G B 444 42.917 129.060 52.191 1.00 24.56 C
ATOM 12 O2' G B 444 42.274 128.555 51.050 1.00 26.91 O
ATOM 13 C1' G B 444 41.864 129.678 53.115 1.00 26.39 C
ATOM 14 N9 G B 444 42.434 130.757 53.924 1.00 30.35 N
ATOM 15 C8 G B 444 42.918 130.665 55.210 1.00 30.17 C
ATOM 16 N7 G B 444 43.437 131.781 55.648 1.00 29.03 N
ATOM 17 C5 G B 444 43.276 132.672 54.598 1.00 31.62 C
ATOM 18 C6 G B 444 43.669 134.036 54.480 1.00 32.79 C
ATOM 19 O6 G B 444 44.259 134.746 55.303 1.00 29.57 O
ATOM 20 N1 G B 444 43.314 134.562 53.242 1.00 34.08 N
ATOM 21 C2 G B 444 42.669 133.874 52.242 1.00 31.69 C
ATOM 22 N2 G B 444 42.424 134.570 51.127 1.00 32.43 N
ATOM 23 N3 G B 444 42.299 132.603 52.334 1.00 29.50 N
ATOM 24 C4 G B 444 42.637 132.066 53.530 1.00 31.27 C
ATOM 25 P U B 445 45.720 126.795 52.437 1.00 24.37 P
ATOM 26 OP1 U B 445 46.202 125.687 51.573 1.00 23.14 O
ATOM 27 OP2 U B 445 46.012 126.762 53.881 1.00 25.12 O
ATOM 28 O5' U B 445 46.278 128.171 51.852 1.00 24.24 O
TER
ATOM 2 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G A 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G A 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G A 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G A 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G A 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G A 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G A 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G A 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G A 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G A 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G A 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G A 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G A 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G A 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G A 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G A 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G A 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G A 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G A 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G A 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G A 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G A 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G A 23 44.943 135.040 46.674 1.00 34.64 O
TER
ATOM 1 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 2 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 3 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 4 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 5 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
ATOM 6 C5' G B 444 42.354 126.595 54.931 1.00 25.10 C
ATOM 7 C4' G B 444 42.173 127.416 53.682 1.00 24.98 C
ATOM 8 O4' G B 444 41.431 128.637 53.979 1.00 27.13 O
ATOM 9 C3' G B 444 43.448 127.931 53.056 1.00 23.34 C
ATOM 10 O3' G B 444 44.123 126.931 52.311 1.00 23.79 O
ATOM 11 C2' G B 444 42.917 129.060 52.191 1.00 24.56 C
ATOM 12 O2' G B 444 42.274 128.555 51.050 1.00 26.91 O
ATOM 13 C1' G B 444 41.864 129.678 53.115 1.00 26.39 C
ATOM 14 N9 G B 444 42.434 130.757 53.924 1.00 30.35 N
ATOM 15 C8 G B 444 42.918 130.665 55.210 1.00 30.17 C
ATOM 16 N7 G B 444 43.437 131.781 55.648 1.00 29.03 N
ATOM 17 C5 G B 444 43.276 132.672 54.598 1.00 31.62 C
ATOM 18 C6 G B 444 43.669 134.036 54.480 1.00 32.79 C
ATOM 19 O6 G B 444 44.259 134.746 55.303 1.00 29.57 O
ATOM 20 N1 G B 444 43.314 134.562 53.242 1.00 34.08 N
ATOM 21 C2 G B 444 42.669 133.874 52.242 1.00 31.69 C
ATOM 22 N2 G B 444 42.424 134.570 51.127 1.00 32.43 N
ATOM 23 N3 G B 444 42.299 132.603 52.334 1.00 29.50 N
ATOM 24 C4 G B 444 42.637 132.066 53.530 1.00 31.27 C
ATOM 25 P U B 445 45.720 126.795 52.437 1.00 24.37 P
ATOM 26 OP1 U B 445 46.202 125.687 51.573 1.00 23.14 O
ATOM 27 OP2 U B 445 46.012 126.762 53.881 1.00 25.12 O
ATOM 28 O5' U B 445 46.278 128.171 51.852 1.00 24.24 O
TER
Atoms:
OP1: (40.546,139.144,42.519)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
OP1: (43.685,125.304,57.278)
OP2: (44.321,127.663,58.056)
C3': (43.448,127.931,53.056)
C1': (41.864,129.678,53.115)
C5': (42.354,126.595,54.931)
O6: (44.259,134.746,55.303)
O4': (41.431,128.637,53.979)
C8: (42.918,130.665,55.210)
C2: (42.669,133.874,52.242)
C6: (43.669,134.036,54.480)
C5: (43.276,132.672,54.598)
C4: (42.637,132.066,53.530)
P: (43.384,126.754,57.353)
C4': (42.173,127.416,53.682)
C2': (42.917,129.060,52.191)
O2': (42.274,128.555,51.050)
N1: (43.314,134.562,53.242)
N2: (42.424,134.570,51.127)
N3: (42.299,132.603,52.334)
N7: (43.437,131.781,55.648)
N9: (42.434,130.757,53.924)
O5': (43.192,127.292,55.868)
O3': (44.123,126.931,52.311)
OP2: (44.321,127.663,58.056)
C3': (43.448,127.931,53.056)
C1': (41.864,129.678,53.115)
C5': (42.354,126.595,54.931)
O6: (44.259,134.746,55.303)
O4': (41.431,128.637,53.979)
C8: (42.918,130.665,55.210)
C2: (42.669,133.874,52.242)
C6: (43.669,134.036,54.480)
C5: (43.276,132.672,54.598)
C4: (42.637,132.066,53.530)
P: (43.384,126.754,57.353)
C4': (42.173,127.416,53.682)
C2': (42.917,129.060,52.191)
O2': (42.274,128.555,51.050)
N1: (43.314,134.562,53.242)
N2: (42.424,134.570,51.127)
N3: (42.299,132.603,52.334)
N7: (43.437,131.781,55.648)
N9: (42.434,130.757,53.924)
O5': (43.192,127.292,55.868)
O3': (44.123,126.931,52.311)
Image (generated by PyMOL):