Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0303:0324
Extra
PDB:
ATOM 1 O3' G A 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 2 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 3 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 4 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 5 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
ATOM 6 C5' G A 303 6.934 151.598 51.501 1.00 50.31 C
ATOM 7 C4' G A 303 8.225 151.925 50.791 1.00 51.95 C
ATOM 8 O4' G A 303 9.341 151.767 51.703 1.00 53.04 O
ATOM 9 C3' G A 303 8.570 151.023 49.618 1.00 53.24 C
ATOM 10 O3' G A 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 11 C2' G A 303 10.081 151.187 49.516 1.00 52.62 C
ATOM 12 O2' G A 303 10.462 152.398 48.897 1.00 53.03 O
ATOM 13 C1' G A 303 10.468 151.283 50.992 1.00 52.33 C
ATOM 14 N9 G A 303 10.898 150.024 51.592 1.00 51.85 N
ATOM 15 C8 G A 303 10.313 149.357 52.642 1.00 52.51 C
ATOM 16 N7 G A 303 10.975 148.294 53.005 1.00 53.30 N
ATOM 17 C5 G A 303 12.054 148.246 52.133 1.00 53.30 C
ATOM 18 C6 G A 303 13.128 147.329 52.054 1.00 54.44 C
ATOM 19 O6 G A 303 13.361 146.347 52.775 1.00 56.72 O
ATOM 20 N1 G A 303 13.994 147.646 51.012 1.00 53.21 N
ATOM 21 C2 G A 303 13.852 148.717 50.165 1.00 51.67 C
ATOM 22 N2 G A 303 14.793 148.860 49.217 1.00 50.75 N
ATOM 23 N3 G A 303 12.863 149.585 50.240 1.00 51.33 N
ATOM 24 C4 G A 303 12.007 149.292 51.240 1.00 52.03 C
ATOM 25 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 26 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 27 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 28 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
TER
ATOM 1 O3' U B 323 19.280 147.250 40.657 1.00 46.71 O
ATOM 2 P G B 324 18.128 147.757 41.655 1.00 47.05 P
ATOM 3 OP1 G B 324 16.824 147.170 41.260 1.00 46.64 O
ATOM 4 OP2 G B 324 18.268 149.229 41.749 1.00 48.95 O
ATOM 5 O5' G B 324 18.586 147.187 43.067 1.00 49.69 O
ATOM 6 C5' G B 324 17.924 146.076 43.651 1.00 46.36 C
ATOM 7 C4' G B 324 17.465 146.425 45.039 1.00 44.84 C
ATOM 8 O4' G B 324 17.153 147.843 45.148 1.00 43.74 O
ATOM 9 C3' G B 324 16.198 145.683 45.423 1.00 45.66 C
ATOM 10 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 11 C2' G B 324 15.123 146.693 45.029 1.00 44.14 C
ATOM 12 O2' G B 324 13.890 146.503 45.673 1.00 46.30 O
ATOM 13 C1' G B 324 15.782 148.001 45.459 1.00 44.62 C
ATOM 14 N9 G B 324 15.288 149.199 44.785 1.00 45.57 N
ATOM 15 C8 G B 324 15.477 149.547 43.468 1.00 44.89 C
ATOM 16 N7 G B 324 14.957 150.707 43.163 1.00 45.30 N
ATOM 17 C5 G B 324 14.380 151.150 44.347 1.00 44.53 C
ATOM 18 C6 G B 324 13.683 152.360 44.638 1.00 44.52 C
ATOM 19 O6 G B 324 13.429 153.310 43.884 1.00 44.38 O
ATOM 20 N1 G B 324 13.273 152.406 45.963 1.00 43.10 N
ATOM 21 C2 G B 324 13.501 151.425 46.891 1.00 45.38 C
ATOM 22 N2 G B 324 13.033 151.666 48.121 1.00 45.79 N
ATOM 23 N3 G B 324 14.146 150.294 46.636 1.00 45.62 N
ATOM 24 C4 G B 324 14.559 150.226 45.354 1.00 45.06 C
ATOM 25 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 26 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 27 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 28 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
TER
ATOM 2 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 3 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 4 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 5 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
ATOM 6 C5' G A 303 6.934 151.598 51.501 1.00 50.31 C
ATOM 7 C4' G A 303 8.225 151.925 50.791 1.00 51.95 C
ATOM 8 O4' G A 303 9.341 151.767 51.703 1.00 53.04 O
ATOM 9 C3' G A 303 8.570 151.023 49.618 1.00 53.24 C
ATOM 10 O3' G A 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 11 C2' G A 303 10.081 151.187 49.516 1.00 52.62 C
ATOM 12 O2' G A 303 10.462 152.398 48.897 1.00 53.03 O
ATOM 13 C1' G A 303 10.468 151.283 50.992 1.00 52.33 C
ATOM 14 N9 G A 303 10.898 150.024 51.592 1.00 51.85 N
ATOM 15 C8 G A 303 10.313 149.357 52.642 1.00 52.51 C
ATOM 16 N7 G A 303 10.975 148.294 53.005 1.00 53.30 N
ATOM 17 C5 G A 303 12.054 148.246 52.133 1.00 53.30 C
ATOM 18 C6 G A 303 13.128 147.329 52.054 1.00 54.44 C
ATOM 19 O6 G A 303 13.361 146.347 52.775 1.00 56.72 O
ATOM 20 N1 G A 303 13.994 147.646 51.012 1.00 53.21 N
ATOM 21 C2 G A 303 13.852 148.717 50.165 1.00 51.67 C
ATOM 22 N2 G A 303 14.793 148.860 49.217 1.00 50.75 N
ATOM 23 N3 G A 303 12.863 149.585 50.240 1.00 51.33 N
ATOM 24 C4 G A 303 12.007 149.292 51.240 1.00 52.03 C
ATOM 25 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 26 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 27 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 28 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
TER
ATOM 1 O3' U B 323 19.280 147.250 40.657 1.00 46.71 O
ATOM 2 P G B 324 18.128 147.757 41.655 1.00 47.05 P
ATOM 3 OP1 G B 324 16.824 147.170 41.260 1.00 46.64 O
ATOM 4 OP2 G B 324 18.268 149.229 41.749 1.00 48.95 O
ATOM 5 O5' G B 324 18.586 147.187 43.067 1.00 49.69 O
ATOM 6 C5' G B 324 17.924 146.076 43.651 1.00 46.36 C
ATOM 7 C4' G B 324 17.465 146.425 45.039 1.00 44.84 C
ATOM 8 O4' G B 324 17.153 147.843 45.148 1.00 43.74 O
ATOM 9 C3' G B 324 16.198 145.683 45.423 1.00 45.66 C
ATOM 10 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 11 C2' G B 324 15.123 146.693 45.029 1.00 44.14 C
ATOM 12 O2' G B 324 13.890 146.503 45.673 1.00 46.30 O
ATOM 13 C1' G B 324 15.782 148.001 45.459 1.00 44.62 C
ATOM 14 N9 G B 324 15.288 149.199 44.785 1.00 45.57 N
ATOM 15 C8 G B 324 15.477 149.547 43.468 1.00 44.89 C
ATOM 16 N7 G B 324 14.957 150.707 43.163 1.00 45.30 N
ATOM 17 C5 G B 324 14.380 151.150 44.347 1.00 44.53 C
ATOM 18 C6 G B 324 13.683 152.360 44.638 1.00 44.52 C
ATOM 19 O6 G B 324 13.429 153.310 43.884 1.00 44.38 O
ATOM 20 N1 G B 324 13.273 152.406 45.963 1.00 43.10 N
ATOM 21 C2 G B 324 13.501 151.425 46.891 1.00 45.38 C
ATOM 22 N2 G B 324 13.033 151.666 48.121 1.00 45.79 N
ATOM 23 N3 G B 324 14.146 150.294 46.636 1.00 45.62 N
ATOM 24 C4 G B 324 14.559 150.226 45.354 1.00 45.06 C
ATOM 25 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 26 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 27 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 28 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
TER
Atoms:
OP1: (7.039,150.228,54.306)
OP2: (4.776,149.983,53.133)
C3': (8.570,151.023,49.618)
C1': (10.468,151.283,50.992)
C5': (6.934,151.598,51.501)
O6: (13.361,146.347,52.775)
O4': (9.341,151.767,51.703)
C8: (10.313,149.357,52.642)
C2: (13.852,148.717,50.165)
C6: (13.128,147.329,52.054)
C5: (12.054,148.246,52.133)
C4: (12.007,149.292,51.240)
P: (6.230,149.697,53.183)
C4': (8.225,151.925,50.791)
C2': (10.081,151.187,49.516)
O2': (10.462,152.398,48.897)
N1: (13.994,147.646,51.012)
N2: (14.793,148.860,49.217)
N3: (12.863,149.585,50.240)
N7: (10.975,148.294,53.005)
N9: (10.898,150.024,51.592)
O5': (6.885,150.198,51.822)
O3': (7.901,151.457,48.442)
OP2: (4.776,149.983,53.133)
C3': (8.570,151.023,49.618)
C1': (10.468,151.283,50.992)
C5': (6.934,151.598,51.501)
O6: (13.361,146.347,52.775)
O4': (9.341,151.767,51.703)
C8: (10.313,149.357,52.642)
C2: (13.852,148.717,50.165)
C6: (13.128,147.329,52.054)
C5: (12.054,148.246,52.133)
C4: (12.007,149.292,51.240)
P: (6.230,149.697,53.183)
C4': (8.225,151.925,50.791)
C2': (10.081,151.187,49.516)
O2': (10.462,152.398,48.897)
N1: (13.994,147.646,51.012)
N2: (14.793,148.860,49.217)
N3: (12.863,149.585,50.240)
N7: (10.975,148.294,53.005)
N9: (10.898,150.024,51.592)
O5': (6.885,150.198,51.822)
O3': (7.901,151.457,48.442)
OP1: (16.824,147.170,41.260)
OP2: (18.268,149.229,41.749)
C3': (16.198,145.683,45.423)
C1': (15.782,148.001,45.459)
C5': (17.924,146.076,43.651)
O6: (13.429,153.310,43.884)
O4': (17.153,147.843,45.148)
C8: (15.477,149.547,43.468)
C2: (13.501,151.425,46.891)
C6: (13.683,152.360,44.638)
C5: (14.380,151.150,44.347)
C4: (14.559,150.226,45.354)
P: (18.128,147.757,41.655)
C4': (17.465,146.425,45.039)
C2': (15.123,146.693,45.029)
O2': (13.890,146.503,45.673)
N1: (13.273,152.406,45.963)
N2: (13.033,151.666,48.121)
N3: (14.146,150.294,46.636)
N7: (14.957,150.707,43.163)
N9: (15.288,149.199,44.785)
O5': (18.586,147.187,43.067)
O3': (16.228,145.455,46.823)
OP2: (18.268,149.229,41.749)
C3': (16.198,145.683,45.423)
C1': (15.782,148.001,45.459)
C5': (17.924,146.076,43.651)
O6: (13.429,153.310,43.884)
O4': (17.153,147.843,45.148)
C8: (15.477,149.547,43.468)
C2: (13.501,151.425,46.891)
C6: (13.683,152.360,44.638)
C5: (14.380,151.150,44.347)
C4: (14.559,150.226,45.354)
P: (18.128,147.757,41.655)
C4': (17.465,146.425,45.039)
C2': (15.123,146.693,45.029)
O2': (13.890,146.503,45.673)
N1: (13.273,152.406,45.963)
N2: (13.033,151.666,48.121)
N3: (14.146,150.294,46.636)
N7: (14.957,150.707,43.163)
N9: (15.288,149.199,44.785)
O5': (18.586,147.187,43.067)
O3': (16.228,145.455,46.823)
Image (generated by PyMOL):