Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0475:0500
Extra
PDB:
ATOM 1 O3' A A 474 21.172 163.946 51.313 1.00 46.50 O
ATOM 2 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 3 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 4 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 5 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
ATOM 6 C5' G A 475 24.027 162.702 52.569 1.00 45.87 C
ATOM 7 C4' G A 475 24.644 162.522 53.936 1.00 45.16 C
ATOM 8 O4' G A 475 25.106 161.147 54.091 1.00 42.73 O
ATOM 9 C3' G A 475 25.852 163.413 54.238 1.00 44.74 C
ATOM 10 O3' G A 475 25.857 163.761 55.623 1.00 45.32 O
ATOM 11 C2' G A 475 27.019 162.478 53.956 1.00 43.08 C
ATOM 12 O2' G A 475 28.184 162.864 54.648 1.00 43.99 O
ATOM 13 C1' G A 475 26.457 161.162 54.491 1.00 42.59 C
ATOM 14 N9 G A 475 27.107 159.933 54.043 1.00 41.11 N
ATOM 15 C8 G A 475 27.751 159.702 52.848 1.00 40.02 C
ATOM 16 N7 G A 475 28.283 158.512 52.775 1.00 37.93 N
ATOM 17 C5 G A 475 27.962 157.918 53.990 1.00 37.80 C
ATOM 18 C6 G A 475 28.283 156.632 54.497 1.00 38.68 C
ATOM 19 O6 G A 475 28.959 155.739 53.962 1.00 40.98 O
ATOM 20 N1 G A 475 27.742 156.431 55.765 1.00 35.39 N
ATOM 21 C2 G A 475 27.001 157.352 56.461 1.00 37.36 C
ATOM 22 N2 G A 475 26.556 156.973 57.673 1.00 36.84 N
ATOM 23 N3 G A 475 26.711 158.561 56.005 1.00 38.32 N
ATOM 24 C4 G A 475 27.220 158.773 54.773 1.00 38.34 C
ATOM 25 P U A 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 26 OP1 U A 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 27 OP2 U A 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 28 O5' U A 476 25.232 165.879 56.814 1.00 47.06 O
TER
ATOM 1 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 2 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G B 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G B 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G B 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G B 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G B 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G B 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G B 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G B 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G B 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G B 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G B 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G B 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G B 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G B 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G B 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G B 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G B 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G B 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
TER
ATOM 2 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 3 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 4 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 5 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
ATOM 6 C5' G A 475 24.027 162.702 52.569 1.00 45.87 C
ATOM 7 C4' G A 475 24.644 162.522 53.936 1.00 45.16 C
ATOM 8 O4' G A 475 25.106 161.147 54.091 1.00 42.73 O
ATOM 9 C3' G A 475 25.852 163.413 54.238 1.00 44.74 C
ATOM 10 O3' G A 475 25.857 163.761 55.623 1.00 45.32 O
ATOM 11 C2' G A 475 27.019 162.478 53.956 1.00 43.08 C
ATOM 12 O2' G A 475 28.184 162.864 54.648 1.00 43.99 O
ATOM 13 C1' G A 475 26.457 161.162 54.491 1.00 42.59 C
ATOM 14 N9 G A 475 27.107 159.933 54.043 1.00 41.11 N
ATOM 15 C8 G A 475 27.751 159.702 52.848 1.00 40.02 C
ATOM 16 N7 G A 475 28.283 158.512 52.775 1.00 37.93 N
ATOM 17 C5 G A 475 27.962 157.918 53.990 1.00 37.80 C
ATOM 18 C6 G A 475 28.283 156.632 54.497 1.00 38.68 C
ATOM 19 O6 G A 475 28.959 155.739 53.962 1.00 40.98 O
ATOM 20 N1 G A 475 27.742 156.431 55.765 1.00 35.39 N
ATOM 21 C2 G A 475 27.001 157.352 56.461 1.00 37.36 C
ATOM 22 N2 G A 475 26.556 156.973 57.673 1.00 36.84 N
ATOM 23 N3 G A 475 26.711 158.561 56.005 1.00 38.32 N
ATOM 24 C4 G A 475 27.220 158.773 54.773 1.00 38.34 C
ATOM 25 P U A 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 26 OP1 U A 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 27 OP2 U A 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 28 O5' U A 476 25.232 165.879 56.814 1.00 47.06 O
TER
ATOM 1 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 2 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G B 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G B 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G B 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G B 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G B 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G B 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G B 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G B 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G B 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G B 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G B 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G B 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G B 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G B 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G B 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G B 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G B 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G B 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
TER
Atoms:
OP1: (21.436,163.171,53.732)
OP2: (21.668,165.638,53.084)
C3': (25.852,163.413,54.238)
C1': (26.457,161.162,54.491)
C5': (24.027,162.702,52.569)
O6: (28.959,155.739,53.962)
O4': (25.106,161.147,54.091)
C8: (27.751,159.702,52.848)
C2: (27.001,157.352,56.461)
C6: (28.283,156.632,54.497)
C5: (27.962,157.918,53.990)
C4: (27.220,158.773,54.773)
P: (21.868,164.206,52.753)
C4': (24.644,162.522,53.936)
C2': (27.019,162.478,53.956)
O2': (28.184,162.864,54.648)
N1: (27.742,156.431,55.765)
N2: (26.556,156.973,57.673)
N3: (26.711,158.561,56.005)
N7: (28.283,158.512,52.775)
N9: (27.107,159.933,54.043)
O5': (23.423,164.004,52.474)
O3': (25.857,163.761,55.623)
OP2: (21.668,165.638,53.084)
C3': (25.852,163.413,54.238)
C1': (26.457,161.162,54.491)
C5': (24.027,162.702,52.569)
O6: (28.959,155.739,53.962)
O4': (25.106,161.147,54.091)
C8: (27.751,159.702,52.848)
C2: (27.001,157.352,56.461)
C6: (28.283,156.632,54.497)
C5: (27.962,157.918,53.990)
C4: (27.220,158.773,54.773)
P: (21.868,164.206,52.753)
C4': (24.644,162.522,53.936)
C2': (27.019,162.478,53.956)
O2': (28.184,162.864,54.648)
N1: (27.742,156.431,55.765)
N2: (26.556,156.973,57.673)
N3: (26.711,158.561,56.005)
N7: (28.283,158.512,52.775)
N9: (27.107,159.933,54.043)
O5': (23.423,164.004,52.474)
O3': (25.857,163.761,55.623)
OP1: (24.812,153.395,64.189)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
Image (generated by PyMOL):