Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:022:0444
Extra
PDB:
ATOM 1 O3' C A 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 2 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G A 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G A 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G A 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G A 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G A 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G A 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G A 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G A 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G A 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G A 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G A 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G A 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G A 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G A 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G A 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G A 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G A 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G A 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G A 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G A 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G A 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G A 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G A 23 45.007 134.809 46.697 1.00 33.80 O
TER
ATOM 1 O3' A B 443 42.075 126.898 58.052 1.00 25.37 O
ATOM 2 P G B 444 43.513 126.661 57.404 1.00 27.57 P
ATOM 3 OP1 G B 444 43.765 125.201 57.388 1.00 27.43 O
ATOM 4 OP2 G B 444 44.467 127.565 58.082 1.00 27.76 O
ATOM 5 O5' G B 444 43.341 127.161 55.904 1.00 27.31 O
ATOM 6 C5' G B 444 42.502 126.444 54.985 1.00 26.99 C
ATOM 7 C4' G B 444 42.292 127.244 53.727 1.00 26.71 C
ATOM 8 O4' G B 444 41.539 128.454 54.024 1.00 29.29 O
ATOM 9 C3' G B 444 43.545 127.774 53.064 1.00 25.64 C
ATOM 10 O3' G B 444 44.236 126.790 52.319 1.00 24.06 O
ATOM 11 C2' G B 444 42.978 128.880 52.196 1.00 27.45 C
ATOM 12 O2' G B 444 42.321 128.352 51.070 1.00 27.68 O
ATOM 13 C1' G B 444 41.943 129.493 53.141 1.00 29.97 C
ATOM 14 N9 G B 444 42.534 130.571 53.932 1.00 34.09 N
ATOM 15 C8 G B 444 43.014 130.487 55.219 1.00 34.98 C
ATOM 16 N7 G B 444 43.530 131.606 55.650 1.00 34.47 N
ATOM 17 C5 G B 444 43.376 132.486 54.590 1.00 36.06 C
ATOM 18 C6 G B 444 43.763 133.839 54.465 1.00 37.33 C
ATOM 19 O6 G B 444 44.338 134.553 55.291 1.00 37.75 O
ATOM 20 N1 G B 444 43.418 134.356 53.221 1.00 38.31 N
ATOM 21 C2 G B 444 42.781 133.662 52.225 1.00 36.40 C
ATOM 22 N2 G B 444 42.521 134.349 51.116 1.00 36.52 N
ATOM 23 N3 G B 444 42.423 132.393 52.320 1.00 35.69 N
ATOM 24 C4 G B 444 42.750 131.869 53.524 1.00 35.61 C
ATOM 25 P U B 445 45.833 126.669 52.472 1.00 25.38 P
ATOM 26 OP1 U B 445 46.327 125.568 51.620 1.00 23.49 O
ATOM 27 OP2 U B 445 46.110 126.639 53.923 1.00 25.55 O
ATOM 28 O5' U B 445 46.388 128.049 51.891 1.00 25.39 O
TER
ATOM 2 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G A 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G A 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G A 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G A 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G A 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G A 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G A 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G A 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G A 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G A 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G A 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G A 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G A 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G A 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G A 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G A 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G A 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G A 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G A 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G A 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G A 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G A 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G A 23 45.007 134.809 46.697 1.00 33.80 O
TER
ATOM 1 O3' A B 443 42.075 126.898 58.052 1.00 25.37 O
ATOM 2 P G B 444 43.513 126.661 57.404 1.00 27.57 P
ATOM 3 OP1 G B 444 43.765 125.201 57.388 1.00 27.43 O
ATOM 4 OP2 G B 444 44.467 127.565 58.082 1.00 27.76 O
ATOM 5 O5' G B 444 43.341 127.161 55.904 1.00 27.31 O
ATOM 6 C5' G B 444 42.502 126.444 54.985 1.00 26.99 C
ATOM 7 C4' G B 444 42.292 127.244 53.727 1.00 26.71 C
ATOM 8 O4' G B 444 41.539 128.454 54.024 1.00 29.29 O
ATOM 9 C3' G B 444 43.545 127.774 53.064 1.00 25.64 C
ATOM 10 O3' G B 444 44.236 126.790 52.319 1.00 24.06 O
ATOM 11 C2' G B 444 42.978 128.880 52.196 1.00 27.45 C
ATOM 12 O2' G B 444 42.321 128.352 51.070 1.00 27.68 O
ATOM 13 C1' G B 444 41.943 129.493 53.141 1.00 29.97 C
ATOM 14 N9 G B 444 42.534 130.571 53.932 1.00 34.09 N
ATOM 15 C8 G B 444 43.014 130.487 55.219 1.00 34.98 C
ATOM 16 N7 G B 444 43.530 131.606 55.650 1.00 34.47 N
ATOM 17 C5 G B 444 43.376 132.486 54.590 1.00 36.06 C
ATOM 18 C6 G B 444 43.763 133.839 54.465 1.00 37.33 C
ATOM 19 O6 G B 444 44.338 134.553 55.291 1.00 37.75 O
ATOM 20 N1 G B 444 43.418 134.356 53.221 1.00 38.31 N
ATOM 21 C2 G B 444 42.781 133.662 52.225 1.00 36.40 C
ATOM 22 N2 G B 444 42.521 134.349 51.116 1.00 36.52 N
ATOM 23 N3 G B 444 42.423 132.393 52.320 1.00 35.69 N
ATOM 24 C4 G B 444 42.750 131.869 53.524 1.00 35.61 C
ATOM 25 P U B 445 45.833 126.669 52.472 1.00 25.38 P
ATOM 26 OP1 U B 445 46.327 125.568 51.620 1.00 23.49 O
ATOM 27 OP2 U B 445 46.110 126.639 53.923 1.00 25.55 O
ATOM 28 O5' U B 445 46.388 128.049 51.891 1.00 25.39 O
TER
Atoms:
OP1: (40.660,138.875,42.508)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
OP1: (43.765,125.201,57.388)
OP2: (44.467,127.565,58.082)
C3': (43.545,127.774,53.064)
C1': (41.943,129.493,53.141)
C5': (42.502,126.444,54.985)
O6: (44.338,134.553,55.291)
O4': (41.539,128.454,54.024)
C8: (43.014,130.487,55.219)
C2: (42.781,133.662,52.225)
C6: (43.763,133.839,54.465)
C5: (43.376,132.486,54.590)
C4: (42.750,131.869,53.524)
P: (43.513,126.661,57.404)
C4': (42.292,127.244,53.727)
C2': (42.978,128.880,52.196)
O2': (42.321,128.352,51.070)
N1: (43.418,134.356,53.221)
N2: (42.521,134.349,51.116)
N3: (42.423,132.393,52.320)
N7: (43.530,131.606,55.650)
N9: (42.534,130.571,53.932)
O5': (43.341,127.161,55.904)
O3': (44.236,126.790,52.319)
OP2: (44.467,127.565,58.082)
C3': (43.545,127.774,53.064)
C1': (41.943,129.493,53.141)
C5': (42.502,126.444,54.985)
O6: (44.338,134.553,55.291)
O4': (41.539,128.454,54.024)
C8: (43.014,130.487,55.219)
C2: (42.781,133.662,52.225)
C6: (43.763,133.839,54.465)
C5: (43.376,132.486,54.590)
C4: (42.750,131.869,53.524)
P: (43.513,126.661,57.404)
C4': (42.292,127.244,53.727)
C2': (42.978,128.880,52.196)
O2': (42.321,128.352,51.070)
N1: (43.418,134.356,53.221)
N2: (42.521,134.349,51.116)
N3: (42.423,132.393,52.320)
N7: (43.530,131.606,55.650)
N9: (42.534,130.571,53.932)
O5': (43.341,127.161,55.904)
O3': (44.236,126.790,52.319)
Image (generated by PyMOL):