ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:Q41:Q42

Extra

PDB:
ATOM 1 O3' U A 40 25.846 45.981 44.591 1.00 42.29 O
ATOM 2 P A A 41 25.415 45.179 43.282 1.00 44.01 P
ATOM 3 OP1 A A 41 24.617 44.039 43.774 1.00 42.17 O
ATOM 4 OP2 A A 41 26.561 44.984 42.358 1.00 44.49 O
ATOM 5 O5' A A 41 24.506 46.242 42.537 1.00 39.04 O
ATOM 6 C5' A A 41 23.513 46.954 43.202 1.00 35.69 C
ATOM 7 C4' A A 41 22.390 47.074 42.204 1.00 34.84 C
ATOM 8 O4' A A 41 22.939 47.706 41.017 1.00 32.82 O
ATOM 9 C3' A A 41 21.813 45.737 41.747 1.00 32.44 C
ATOM 10 O3' A A 41 20.432 45.835 41.657 1.00 32.66 O
ATOM 11 C2' A A 41 22.463 45.550 40.378 1.00 32.05 C
ATOM 12 O2' A A 41 21.754 44.699 39.505 1.00 30.88 O
ATOM 13 C1' A A 41 22.507 46.989 39.888 1.00 30.86 C
ATOM 14 N9 A A 41 23.478 47.202 38.829 1.00 31.38 N
ATOM 15 C8 A A 41 24.834 47.320 38.960 1.00 30.39 C
ATOM 16 N7 A A 41 25.458 47.491 37.817 1.00 30.20 N
ATOM 17 C5 A A 41 24.451 47.483 36.877 1.00 29.58 C
ATOM 18 C6 A A 41 24.436 47.603 35.485 1.00 29.43 C
ATOM 19 N6 A A 41 25.517 47.778 34.750 1.00 30.83 N
ATOM 20 N1 A A 41 23.260 47.549 34.840 1.00 30.38 N
ATOM 21 C2 A A 41 22.159 47.360 35.559 1.00 30.62 C
ATOM 22 N3 A A 41 22.038 47.236 36.877 1.00 31.54 N
ATOM 23 C4 A A 41 23.227 47.302 37.483 1.00 30.98 C
ATOM 24 P U A 42 19.462 45.058 42.653 1.00 33.86 P
ATOM 25 OP1 U A 42 19.853 45.392 44.039 1.00 32.70 O
ATOM 26 OP2 U A 42 19.334 43.658 42.202 1.00 31.56 O
ATOM 27 O5' U A 42 18.095 45.808 42.295 1.00 33.58 O
TER

ATOM 1 O3' A B 41 20.432 45.835 41.657 1.00 32.66 O
ATOM 2 P U B 42 19.462 45.058 42.653 1.00 33.86 P
ATOM 3 OP1 U B 42 19.853 45.392 44.039 1.00 32.70 O
ATOM 4 OP2 U B 42 19.334 43.658 42.202 1.00 31.56 O
ATOM 5 O5' U B 42 18.095 45.808 42.295 1.00 33.58 O
ATOM 6 C5' U B 42 17.801 47.120 42.743 1.00 32.18 C
ATOM 7 C4' U B 42 16.452 47.510 42.198 1.00 31.66 C
ATOM 8 O4' U B 42 16.534 47.447 40.767 1.00 31.58 O
ATOM 9 C3' U B 42 15.329 46.553 42.524 1.00 32.46 C
ATOM 10 O3' U B 42 14.780 46.839 43.799 1.00 30.20 O
ATOM 11 C2' U B 42 14.355 46.795 41.378 1.00 32.47 C
ATOM 12 O2' U B 42 13.532 47.926 41.536 1.00 34.68 O
ATOM 13 C1' U B 42 15.319 46.994 40.219 1.00 33.58 C
ATOM 14 N1 U B 42 15.546 45.719 39.484 1.00 34.81 N
ATOM 15 C2 U B 42 14.503 45.185 38.780 1.00 34.95 C
ATOM 16 O2 U B 42 13.404 45.706 38.702 1.00 35.25 O
ATOM 17 N3 U B 42 14.787 44.002 38.154 1.00 36.19 N
ATOM 18 C4 U B 42 15.955 43.276 38.150 1.00 35.28 C
ATOM 19 O4 U B 42 16.038 42.207 37.523 1.00 34.60 O
ATOM 20 C5 U B 42 16.985 43.896 38.925 1.00 35.34 C
ATOM 21 C6 U B 42 16.747 45.055 39.544 1.00 34.83 C
ATOM 22 P C B 43 14.368 45.579 44.677 1.00 30.97 P
ATOM 23 OP1 C B 43 13.912 46.078 45.987 1.00 27.96 O
ATOM 24 OP2 C B 43 15.436 44.542 44.630 1.00 28.55 O
ATOM 25 O5' C B 43 13.124 45.035 43.836 1.00 28.03 O
TER

Atoms:
OP1: (24.617,44.039,43.774)
OP2: (26.561,44.984,42.358)
C3': (21.813,45.737,41.747)
C1': (22.507,46.989,39.888)
C5': (23.513,46.954,43.202)
O4': (22.939,47.706,41.017)
C8: (24.834,47.320,38.960)
O2': (21.754,44.699,39.505)
C6: (24.436,47.603,35.485)
C5: (24.451,47.483,36.877)
C4: (23.227,47.302,37.483)
P: (25.415,45.179,43.282)
C4': (22.390,47.074,42.204)
C2': (22.463,45.550,40.378)
C2: (22.159,47.360,35.559)
N1: (23.260,47.549,34.840)
N3: (22.038,47.236,36.877)
N6: (25.517,47.778,34.750)
N7: (25.458,47.491,37.817)
N9: (23.478,47.202,38.829)
O5': (24.506,46.242,42.537)
O3': (20.432,45.835,41.657)
C4: (15.955,43.276,38.150)
N3: (14.787,44.002,38.154)
OP1: (19.853,45.392,44.039)
OP2: (19.334,43.658,42.202)
C2: (14.503,45.185,38.780)
C1': (15.319,46.994,40.219)
C3': (15.329,46.553,42.524)
O5': (18.095,45.808,42.295)
O4': (16.534,47.447,40.767)
C5': (17.801,47.120,42.743)
P: (19.462,45.058,42.653)
C4': (16.452,47.510,42.198)
C2': (14.355,46.795,41.378)
O2': (13.532,47.926,41.536)
N1: (15.546,45.719,39.484)
O4: (16.038,42.207,37.523)
O2: (13.404,45.706,38.702)
C6: (16.747,45.055,39.544)
C5: (16.985,43.896,38.925)
O3': (14.780,46.839,43.799)
Image (generated by PyMOL):
PyMOL image
show in jmol