Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0303:0324
Extra
PDB:
ATOM 1 O3' G A 302 6.575 147.942 53.099 1.00 52.07 O
ATOM 2 P G A 303 6.369 149.533 53.187 1.00 51.48 P
ATOM 3 OP1 G A 303 7.162 150.039 54.335 1.00 51.20 O
ATOM 4 OP2 G A 303 4.914 149.801 53.131 1.00 52.89 O
ATOM 5 O5' G A 303 7.021 150.069 51.840 1.00 50.98 O
ATOM 6 C5' G A 303 7.086 151.474 51.562 1.00 51.87 C
ATOM 7 C4' G A 303 8.366 151.794 50.832 1.00 53.42 C
ATOM 8 O4' G A 303 9.495 151.634 51.725 1.00 53.23 O
ATOM 9 C3' G A 303 8.681 150.877 49.662 1.00 54.98 C
ATOM 10 O3' G A 303 7.980 151.293 48.497 1.00 56.49 O
ATOM 11 C2' G A 303 10.192 151.018 49.530 1.00 54.80 C
ATOM 12 O2' G A 303 10.585 152.204 48.864 1.00 54.90 O
ATOM 13 C1' G A 303 10.605 151.130 51.000 1.00 54.20 C
ATOM 14 N9 G A 303 11.045 149.885 51.627 1.00 53.28 N
ATOM 15 C8 G A 303 10.459 149.239 52.689 1.00 53.24 C
ATOM 16 N7 G A 303 11.128 148.193 53.084 1.00 52.89 N
ATOM 17 C5 G A 303 12.213 148.134 52.221 1.00 52.96 C
ATOM 18 C6 G A 303 13.294 147.224 52.174 1.00 53.51 C
ATOM 19 O6 G A 303 13.525 146.264 52.921 1.00 54.94 O
ATOM 20 N1 G A 303 14.166 147.521 51.130 1.00 52.25 N
ATOM 21 C2 G A 303 14.019 148.562 50.249 1.00 51.05 C
ATOM 22 N2 G A 303 14.957 148.674 49.293 1.00 48.45 N
ATOM 23 N3 G A 303 13.024 149.428 50.298 1.00 51.98 N
ATOM 24 C4 G A 303 12.164 149.156 51.301 1.00 52.41 C
ATOM 25 P A A 304 7.060 150.247 47.706 1.00 56.49 P
ATOM 26 OP1 A A 304 6.043 151.023 46.958 1.00 57.72 O
ATOM 27 OP2 A A 304 6.622 149.211 48.679 1.00 58.22 O
ATOM 28 O5' A A 304 8.057 149.598 46.652 1.00 53.28 O
TER
ATOM 1 O3' U B 323 19.313 147.087 40.664 1.00 47.54 O
ATOM 2 P G B 324 18.148 147.562 41.659 1.00 47.37 P
ATOM 3 OP1 G B 324 16.879 146.892 41.292 1.00 46.27 O
ATOM 4 OP2 G B 324 18.196 149.043 41.731 1.00 47.77 O
ATOM 5 O5' G B 324 18.646 147.041 43.073 1.00 48.59 O
ATOM 6 C5' G B 324 18.034 145.916 43.681 1.00 45.22 C
ATOM 7 C4' G B 324 17.593 146.263 45.073 1.00 42.77 C
ATOM 8 O4' G B 324 17.303 147.684 45.193 1.00 40.84 O
ATOM 9 C3' G B 324 16.323 145.535 45.465 1.00 42.66 C
ATOM 10 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 11 C2' G B 324 15.258 146.562 45.096 1.00 42.15 C
ATOM 12 O2' G B 324 14.025 146.388 45.746 1.00 43.60 O
ATOM 13 C1' G B 324 15.939 147.860 45.521 1.00 42.57 C
ATOM 14 N9 G B 324 15.450 149.049 44.829 1.00 44.40 N
ATOM 15 C8 G B 324 15.625 149.360 43.501 1.00 44.94 C
ATOM 16 N7 G B 324 15.109 150.514 43.171 1.00 45.23 N
ATOM 17 C5 G B 324 14.555 150.995 44.349 1.00 45.55 C
ATOM 18 C6 G B 324 13.876 152.215 44.613 1.00 46.10 C
ATOM 19 O6 G B 324 13.632 153.146 43.835 1.00 47.06 O
ATOM 20 N1 G B 324 13.474 152.299 45.940 1.00 45.34 N
ATOM 21 C2 G B 324 13.699 151.341 46.894 1.00 46.42 C
ATOM 22 N2 G B 324 13.227 151.614 48.118 1.00 46.79 N
ATOM 23 N3 G B 324 14.340 150.201 46.666 1.00 46.95 N
ATOM 24 C4 G B 324 14.740 150.097 45.380 1.00 45.51 C
ATOM 25 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 26 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 27 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 28 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
TER
ATOM 2 P G A 303 6.369 149.533 53.187 1.00 51.48 P
ATOM 3 OP1 G A 303 7.162 150.039 54.335 1.00 51.20 O
ATOM 4 OP2 G A 303 4.914 149.801 53.131 1.00 52.89 O
ATOM 5 O5' G A 303 7.021 150.069 51.840 1.00 50.98 O
ATOM 6 C5' G A 303 7.086 151.474 51.562 1.00 51.87 C
ATOM 7 C4' G A 303 8.366 151.794 50.832 1.00 53.42 C
ATOM 8 O4' G A 303 9.495 151.634 51.725 1.00 53.23 O
ATOM 9 C3' G A 303 8.681 150.877 49.662 1.00 54.98 C
ATOM 10 O3' G A 303 7.980 151.293 48.497 1.00 56.49 O
ATOM 11 C2' G A 303 10.192 151.018 49.530 1.00 54.80 C
ATOM 12 O2' G A 303 10.585 152.204 48.864 1.00 54.90 O
ATOM 13 C1' G A 303 10.605 151.130 51.000 1.00 54.20 C
ATOM 14 N9 G A 303 11.045 149.885 51.627 1.00 53.28 N
ATOM 15 C8 G A 303 10.459 149.239 52.689 1.00 53.24 C
ATOM 16 N7 G A 303 11.128 148.193 53.084 1.00 52.89 N
ATOM 17 C5 G A 303 12.213 148.134 52.221 1.00 52.96 C
ATOM 18 C6 G A 303 13.294 147.224 52.174 1.00 53.51 C
ATOM 19 O6 G A 303 13.525 146.264 52.921 1.00 54.94 O
ATOM 20 N1 G A 303 14.166 147.521 51.130 1.00 52.25 N
ATOM 21 C2 G A 303 14.019 148.562 50.249 1.00 51.05 C
ATOM 22 N2 G A 303 14.957 148.674 49.293 1.00 48.45 N
ATOM 23 N3 G A 303 13.024 149.428 50.298 1.00 51.98 N
ATOM 24 C4 G A 303 12.164 149.156 51.301 1.00 52.41 C
ATOM 25 P A A 304 7.060 150.247 47.706 1.00 56.49 P
ATOM 26 OP1 A A 304 6.043 151.023 46.958 1.00 57.72 O
ATOM 27 OP2 A A 304 6.622 149.211 48.679 1.00 58.22 O
ATOM 28 O5' A A 304 8.057 149.598 46.652 1.00 53.28 O
TER
ATOM 1 O3' U B 323 19.313 147.087 40.664 1.00 47.54 O
ATOM 2 P G B 324 18.148 147.562 41.659 1.00 47.37 P
ATOM 3 OP1 G B 324 16.879 146.892 41.292 1.00 46.27 O
ATOM 4 OP2 G B 324 18.196 149.043 41.731 1.00 47.77 O
ATOM 5 O5' G B 324 18.646 147.041 43.073 1.00 48.59 O
ATOM 6 C5' G B 324 18.034 145.916 43.681 1.00 45.22 C
ATOM 7 C4' G B 324 17.593 146.263 45.073 1.00 42.77 C
ATOM 8 O4' G B 324 17.303 147.684 45.193 1.00 40.84 O
ATOM 9 C3' G B 324 16.323 145.535 45.465 1.00 42.66 C
ATOM 10 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 11 C2' G B 324 15.258 146.562 45.096 1.00 42.15 C
ATOM 12 O2' G B 324 14.025 146.388 45.746 1.00 43.60 O
ATOM 13 C1' G B 324 15.939 147.860 45.521 1.00 42.57 C
ATOM 14 N9 G B 324 15.450 149.049 44.829 1.00 44.40 N
ATOM 15 C8 G B 324 15.625 149.360 43.501 1.00 44.94 C
ATOM 16 N7 G B 324 15.109 150.514 43.171 1.00 45.23 N
ATOM 17 C5 G B 324 14.555 150.995 44.349 1.00 45.55 C
ATOM 18 C6 G B 324 13.876 152.215 44.613 1.00 46.10 C
ATOM 19 O6 G B 324 13.632 153.146 43.835 1.00 47.06 O
ATOM 20 N1 G B 324 13.474 152.299 45.940 1.00 45.34 N
ATOM 21 C2 G B 324 13.699 151.341 46.894 1.00 46.42 C
ATOM 22 N2 G B 324 13.227 151.614 48.118 1.00 46.79 N
ATOM 23 N3 G B 324 14.340 150.201 46.666 1.00 46.95 N
ATOM 24 C4 G B 324 14.740 150.097 45.380 1.00 45.51 C
ATOM 25 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 26 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 27 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 28 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
TER
Atoms:
OP1: (7.162,150.039,54.335)
OP2: (4.914,149.801,53.131)
C3': (8.681,150.877,49.662)
C1': (10.605,151.130,51.000)
C5': (7.086,151.474,51.562)
O6: (13.525,146.264,52.921)
O4': (9.495,151.634,51.725)
C8: (10.459,149.239,52.689)
C2: (14.019,148.562,50.249)
C6: (13.294,147.224,52.174)
C5: (12.213,148.134,52.221)
C4: (12.164,149.156,51.301)
P: (6.369,149.533,53.187)
C4': (8.366,151.794,50.832)
C2': (10.192,151.018,49.530)
O2': (10.585,152.204,48.864)
N1: (14.166,147.521,51.130)
N2: (14.957,148.674,49.293)
N3: (13.024,149.428,50.298)
N7: (11.128,148.193,53.084)
N9: (11.045,149.885,51.627)
O5': (7.021,150.069,51.840)
O3': (7.980,151.293,48.497)
OP2: (4.914,149.801,53.131)
C3': (8.681,150.877,49.662)
C1': (10.605,151.130,51.000)
C5': (7.086,151.474,51.562)
O6: (13.525,146.264,52.921)
O4': (9.495,151.634,51.725)
C8: (10.459,149.239,52.689)
C2: (14.019,148.562,50.249)
C6: (13.294,147.224,52.174)
C5: (12.213,148.134,52.221)
C4: (12.164,149.156,51.301)
P: (6.369,149.533,53.187)
C4': (8.366,151.794,50.832)
C2': (10.192,151.018,49.530)
O2': (10.585,152.204,48.864)
N1: (14.166,147.521,51.130)
N2: (14.957,148.674,49.293)
N3: (13.024,149.428,50.298)
N7: (11.128,148.193,53.084)
N9: (11.045,149.885,51.627)
O5': (7.021,150.069,51.840)
O3': (7.980,151.293,48.497)
OP1: (16.879,146.892,41.292)
OP2: (18.196,149.043,41.731)
C3': (16.323,145.535,45.465)
C1': (15.939,147.860,45.521)
C5': (18.034,145.916,43.681)
O6: (13.632,153.146,43.835)
O4': (17.303,147.684,45.193)
C8: (15.625,149.360,43.501)
C2: (13.699,151.341,46.894)
C6: (13.876,152.215,44.613)
C5: (14.555,150.995,44.349)
C4: (14.740,150.097,45.380)
P: (18.148,147.562,41.659)
C4': (17.593,146.263,45.073)
C2': (15.258,146.562,45.096)
O2': (14.025,146.388,45.746)
N1: (13.474,152.299,45.940)
N2: (13.227,151.614,48.118)
N3: (14.340,150.201,46.666)
N7: (15.109,150.514,43.171)
N9: (15.450,149.049,44.829)
O5': (18.646,147.041,43.073)
O3': (16.375,145.288,46.858)
OP2: (18.196,149.043,41.731)
C3': (16.323,145.535,45.465)
C1': (15.939,147.860,45.521)
C5': (18.034,145.916,43.681)
O6: (13.632,153.146,43.835)
O4': (17.303,147.684,45.193)
C8: (15.625,149.360,43.501)
C2: (13.699,151.341,46.894)
C6: (13.876,152.215,44.613)
C5: (14.555,150.995,44.349)
C4: (14.740,150.097,45.380)
P: (18.148,147.562,41.659)
C4': (17.593,146.263,45.073)
C2': (15.258,146.562,45.096)
O2': (14.025,146.388,45.746)
N1: (13.474,152.299,45.940)
N2: (13.227,151.614,48.118)
N3: (14.340,150.201,46.666)
N7: (15.109,150.514,43.171)
N9: (15.450,149.049,44.829)
O5': (18.646,147.041,43.073)
O3': (16.375,145.288,46.858)
Image (generated by PyMOL):