Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02408:02539
Extra
PDB:
ATOM 1 O3' A A2407 72.790 118.273 164.687 1.00 66.03 O
ATOM 2 P G A2408 72.665 119.155 163.348 1.00 65.58 P
ATOM 3 OP1 G A2408 71.233 119.522 163.154 1.00 64.54 O
ATOM 4 OP2 G A2408 73.389 118.433 162.279 1.00 66.38 O
ATOM 5 O5' G A2408 73.489 120.478 163.680 1.00 65.90 O
ATOM 6 C5' G A2408 72.998 121.446 164.629 1.00 65.66 C
ATOM 7 C4' G A2408 73.981 122.583 164.765 1.00 64.95 C
ATOM 8 O4' G A2408 75.242 122.053 165.247 1.00 64.76 O
ATOM 9 C3' G A2408 74.344 123.283 163.465 1.00 65.20 C
ATOM 10 O3' G A2408 73.385 124.280 163.121 1.00 65.64 O
ATOM 11 C2' G A2408 75.713 123.865 163.786 1.00 65.05 C
ATOM 12 O2' G A2408 75.631 125.034 164.574 1.00 66.22 O
ATOM 13 C1' G A2408 76.318 122.750 164.640 1.00 64.02 C
ATOM 14 N9 G A2408 77.118 121.789 163.885 1.00 62.48 N
ATOM 15 C8 G A2408 76.757 120.515 163.519 1.00 62.00 C
ATOM 16 N7 G A2408 77.688 119.890 162.854 1.00 61.40 N
ATOM 17 C5 G A2408 78.725 120.807 162.772 1.00 61.94 C
ATOM 18 C6 G A2408 79.997 120.696 162.162 1.00 62.76 C
ATOM 19 O6 G A2408 80.478 119.730 161.555 1.00 64.15 O
ATOM 20 N1 G A2408 80.739 121.864 162.310 1.00 62.36 N
ATOM 21 C2 G A2408 80.311 122.992 162.963 1.00 62.58 C
ATOM 22 N2 G A2408 81.172 124.019 162.999 1.00 63.05 N
ATOM 23 N3 G A2408 79.124 123.106 163.539 1.00 62.21 N
ATOM 24 C4 G A2408 78.389 121.984 163.404 1.00 61.90 C
ATOM 25 P A A2409 72.879 124.405 161.601 1.00 66.38 P
ATOM 26 OP1 A A2409 71.873 125.490 161.558 1.00 64.58 O
ATOM 27 OP2 A A2409 72.512 123.053 161.121 1.00 65.68 O
ATOM 28 O5' A A2409 74.178 124.863 160.803 1.00 63.90 O
TER
ATOM 1 O3' A B2538 88.909 127.817 164.618 1.00 89.47 O
ATOM 2 P G B2539 88.204 129.215 164.244 1.00 90.33 P
ATOM 3 OP1 G B2539 89.035 129.818 163.166 1.00 88.97 O
ATOM 4 OP2 G B2539 87.957 129.975 165.501 1.00 89.80 O
ATOM 5 O5' G B2539 86.789 128.805 163.628 1.00 89.59 O
ATOM 6 C5' G B2539 86.714 128.034 162.418 1.00 88.09 C
ATOM 7 C4' G B2539 85.419 127.256 162.358 1.00 86.95 C
ATOM 8 O4' G B2539 85.205 126.591 163.632 1.00 86.60 O
ATOM 9 C3' G B2539 84.119 128.024 162.163 1.00 85.81 C
ATOM 10 O3' G B2539 83.894 128.386 160.798 1.00 83.37 O
ATOM 11 C2' G B2539 83.095 126.992 162.622 1.00 86.59 C
ATOM 12 O2' G B2539 82.850 125.979 161.664 1.00 87.02 O
ATOM 13 C1' G B2539 83.815 126.374 163.818 1.00 86.42 C
ATOM 14 N9 G B2539 83.394 126.980 165.077 1.00 86.00 N
ATOM 15 C8 G B2539 84.075 127.892 165.847 1.00 86.02 C
ATOM 16 N7 G B2539 83.425 128.234 166.926 1.00 85.79 N
ATOM 17 C5 G B2539 82.244 127.506 166.862 1.00 85.47 C
ATOM 18 C6 G B2539 81.139 127.462 167.751 1.00 85.34 C
ATOM 19 O6 G B2539 80.977 128.073 168.813 1.00 85.88 O
ATOM 20 N1 G B2539 80.153 126.597 167.296 1.00 85.03 N
ATOM 21 C2 G B2539 80.217 125.868 166.138 1.00 85.26 C
ATOM 22 N2 G B2539 79.161 125.089 165.871 1.00 85.86 N
ATOM 23 N3 G B2539 81.238 125.898 165.302 1.00 84.84 N
ATOM 24 C4 G B2539 82.209 126.732 165.725 1.00 85.57 C
ATOM 25 P G B2540 82.803 129.515 160.433 1.00 80.20 P
ATOM 26 OP1 G B2540 82.445 129.321 159.007 1.00 81.11 O
ATOM 27 OP2 G B2540 83.307 130.834 160.888 1.00 80.96 O
ATOM 28 O5' G B2540 81.520 129.138 161.297 1.00 79.29 O
TER
ATOM 2 P G A2408 72.665 119.155 163.348 1.00 65.58 P
ATOM 3 OP1 G A2408 71.233 119.522 163.154 1.00 64.54 O
ATOM 4 OP2 G A2408 73.389 118.433 162.279 1.00 66.38 O
ATOM 5 O5' G A2408 73.489 120.478 163.680 1.00 65.90 O
ATOM 6 C5' G A2408 72.998 121.446 164.629 1.00 65.66 C
ATOM 7 C4' G A2408 73.981 122.583 164.765 1.00 64.95 C
ATOM 8 O4' G A2408 75.242 122.053 165.247 1.00 64.76 O
ATOM 9 C3' G A2408 74.344 123.283 163.465 1.00 65.20 C
ATOM 10 O3' G A2408 73.385 124.280 163.121 1.00 65.64 O
ATOM 11 C2' G A2408 75.713 123.865 163.786 1.00 65.05 C
ATOM 12 O2' G A2408 75.631 125.034 164.574 1.00 66.22 O
ATOM 13 C1' G A2408 76.318 122.750 164.640 1.00 64.02 C
ATOM 14 N9 G A2408 77.118 121.789 163.885 1.00 62.48 N
ATOM 15 C8 G A2408 76.757 120.515 163.519 1.00 62.00 C
ATOM 16 N7 G A2408 77.688 119.890 162.854 1.00 61.40 N
ATOM 17 C5 G A2408 78.725 120.807 162.772 1.00 61.94 C
ATOM 18 C6 G A2408 79.997 120.696 162.162 1.00 62.76 C
ATOM 19 O6 G A2408 80.478 119.730 161.555 1.00 64.15 O
ATOM 20 N1 G A2408 80.739 121.864 162.310 1.00 62.36 N
ATOM 21 C2 G A2408 80.311 122.992 162.963 1.00 62.58 C
ATOM 22 N2 G A2408 81.172 124.019 162.999 1.00 63.05 N
ATOM 23 N3 G A2408 79.124 123.106 163.539 1.00 62.21 N
ATOM 24 C4 G A2408 78.389 121.984 163.404 1.00 61.90 C
ATOM 25 P A A2409 72.879 124.405 161.601 1.00 66.38 P
ATOM 26 OP1 A A2409 71.873 125.490 161.558 1.00 64.58 O
ATOM 27 OP2 A A2409 72.512 123.053 161.121 1.00 65.68 O
ATOM 28 O5' A A2409 74.178 124.863 160.803 1.00 63.90 O
TER
ATOM 1 O3' A B2538 88.909 127.817 164.618 1.00 89.47 O
ATOM 2 P G B2539 88.204 129.215 164.244 1.00 90.33 P
ATOM 3 OP1 G B2539 89.035 129.818 163.166 1.00 88.97 O
ATOM 4 OP2 G B2539 87.957 129.975 165.501 1.00 89.80 O
ATOM 5 O5' G B2539 86.789 128.805 163.628 1.00 89.59 O
ATOM 6 C5' G B2539 86.714 128.034 162.418 1.00 88.09 C
ATOM 7 C4' G B2539 85.419 127.256 162.358 1.00 86.95 C
ATOM 8 O4' G B2539 85.205 126.591 163.632 1.00 86.60 O
ATOM 9 C3' G B2539 84.119 128.024 162.163 1.00 85.81 C
ATOM 10 O3' G B2539 83.894 128.386 160.798 1.00 83.37 O
ATOM 11 C2' G B2539 83.095 126.992 162.622 1.00 86.59 C
ATOM 12 O2' G B2539 82.850 125.979 161.664 1.00 87.02 O
ATOM 13 C1' G B2539 83.815 126.374 163.818 1.00 86.42 C
ATOM 14 N9 G B2539 83.394 126.980 165.077 1.00 86.00 N
ATOM 15 C8 G B2539 84.075 127.892 165.847 1.00 86.02 C
ATOM 16 N7 G B2539 83.425 128.234 166.926 1.00 85.79 N
ATOM 17 C5 G B2539 82.244 127.506 166.862 1.00 85.47 C
ATOM 18 C6 G B2539 81.139 127.462 167.751 1.00 85.34 C
ATOM 19 O6 G B2539 80.977 128.073 168.813 1.00 85.88 O
ATOM 20 N1 G B2539 80.153 126.597 167.296 1.00 85.03 N
ATOM 21 C2 G B2539 80.217 125.868 166.138 1.00 85.26 C
ATOM 22 N2 G B2539 79.161 125.089 165.871 1.00 85.86 N
ATOM 23 N3 G B2539 81.238 125.898 165.302 1.00 84.84 N
ATOM 24 C4 G B2539 82.209 126.732 165.725 1.00 85.57 C
ATOM 25 P G B2540 82.803 129.515 160.433 1.00 80.20 P
ATOM 26 OP1 G B2540 82.445 129.321 159.007 1.00 81.11 O
ATOM 27 OP2 G B2540 83.307 130.834 160.888 1.00 80.96 O
ATOM 28 O5' G B2540 81.520 129.138 161.297 1.00 79.29 O
TER
Atoms:
OP1: (71.233,119.522,163.154)
OP2: (73.389,118.433,162.279)
C3': (74.344,123.283,163.465)
C1': (76.318,122.750,164.640)
C5': (72.998,121.446,164.629)
O6: (80.478,119.730,161.555)
O4': (75.242,122.053,165.247)
C8: (76.757,120.515,163.519)
C2: (80.311,122.992,162.963)
C6: (79.997,120.696,162.162)
C5: (78.725,120.807,162.772)
C4: (78.389,121.984,163.404)
P: (72.665,119.155,163.348)
C4': (73.981,122.583,164.765)
C2': (75.713,123.865,163.786)
O2': (75.631,125.034,164.574)
N1: (80.739,121.864,162.310)
N2: (81.172,124.019,162.999)
N3: (79.124,123.106,163.539)
N7: (77.688,119.890,162.854)
N9: (77.118,121.789,163.885)
O5': (73.489,120.478,163.680)
O3': (73.385,124.280,163.121)
OP2: (73.389,118.433,162.279)
C3': (74.344,123.283,163.465)
C1': (76.318,122.750,164.640)
C5': (72.998,121.446,164.629)
O6: (80.478,119.730,161.555)
O4': (75.242,122.053,165.247)
C8: (76.757,120.515,163.519)
C2: (80.311,122.992,162.963)
C6: (79.997,120.696,162.162)
C5: (78.725,120.807,162.772)
C4: (78.389,121.984,163.404)
P: (72.665,119.155,163.348)
C4': (73.981,122.583,164.765)
C2': (75.713,123.865,163.786)
O2': (75.631,125.034,164.574)
N1: (80.739,121.864,162.310)
N2: (81.172,124.019,162.999)
N3: (79.124,123.106,163.539)
N7: (77.688,119.890,162.854)
N9: (77.118,121.789,163.885)
O5': (73.489,120.478,163.680)
O3': (73.385,124.280,163.121)
OP1: (89.035,129.818,163.166)
OP2: (87.957,129.975,165.501)
C3': (84.119,128.024,162.163)
C1': (83.815,126.374,163.818)
C5': (86.714,128.034,162.418)
O6: (80.977,128.073,168.813)
O4': (85.205,126.591,163.632)
C8: (84.075,127.892,165.847)
C2: (80.217,125.868,166.138)
C6: (81.139,127.462,167.751)
C5: (82.244,127.506,166.862)
C4: (82.209,126.732,165.725)
P: (88.204,129.215,164.244)
C4': (85.419,127.256,162.358)
C2': (83.095,126.992,162.622)
O2': (82.850,125.979,161.664)
N1: (80.153,126.597,167.296)
N2: (79.161,125.089,165.871)
N3: (81.238,125.898,165.302)
N7: (83.425,128.234,166.926)
N9: (83.394,126.980,165.077)
O5': (86.789,128.805,163.628)
O3': (83.894,128.386,160.798)
OP2: (87.957,129.975,165.501)
C3': (84.119,128.024,162.163)
C1': (83.815,126.374,163.818)
C5': (86.714,128.034,162.418)
O6: (80.977,128.073,168.813)
O4': (85.205,126.591,163.632)
C8: (84.075,127.892,165.847)
C2: (80.217,125.868,166.138)
C6: (81.139,127.462,167.751)
C5: (82.244,127.506,166.862)
C4: (82.209,126.732,165.725)
P: (88.204,129.215,164.244)
C4': (85.419,127.256,162.358)
C2': (83.095,126.992,162.622)
O2': (82.850,125.979,161.664)
N1: (80.153,126.597,167.296)
N2: (79.161,125.089,165.871)
N3: (81.238,125.898,165.302)
N7: (83.425,128.234,166.926)
N9: (83.394,126.980,165.077)
O5': (86.789,128.805,163.628)
O3': (83.894,128.386,160.798)
Image (generated by PyMOL):