Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0303:0324
Extra
PDB:
ATOM 1 O3' G A 302 6.625 148.292 53.336 1.00 65.98 O
ATOM 2 P G A 303 6.499 149.896 53.383 1.00 65.23 P
ATOM 3 OP1 G A 303 7.407 150.371 54.454 1.00 66.18 O
ATOM 4 OP2 G A 303 5.061 150.255 53.438 1.00 66.28 O
ATOM 5 O5' G A 303 7.090 150.366 51.982 1.00 64.20 O
ATOM 6 C5' G A 303 7.103 151.752 51.618 1.00 65.08 C
ATOM 7 C4' G A 303 8.389 152.088 50.902 1.00 66.67 C
ATOM 8 O4' G A 303 9.504 151.972 51.819 1.00 67.37 O
ATOM 9 C3' G A 303 8.762 151.181 49.738 1.00 67.15 C
ATOM 10 O3' G A 303 8.096 151.601 48.556 1.00 68.17 O
ATOM 11 C2' G A 303 10.268 151.395 49.639 1.00 67.44 C
ATOM 12 O2' G A 303 10.618 152.606 48.996 1.00 66.78 O
ATOM 13 C1' G A 303 10.649 151.520 51.116 1.00 67.54 C
ATOM 14 N9 G A 303 11.110 150.281 51.734 1.00 66.89 N
ATOM 15 C8 G A 303 10.519 149.608 52.774 1.00 66.47 C
ATOM 16 N7 G A 303 11.188 148.555 53.146 1.00 67.57 N
ATOM 17 C5 G A 303 12.284 148.525 52.296 1.00 67.59 C
ATOM 18 C6 G A 303 13.370 147.617 52.233 1.00 68.38 C
ATOM 19 O6 G A 303 13.592 146.630 52.946 1.00 68.61 O
ATOM 20 N1 G A 303 14.258 147.950 51.213 1.00 68.44 N
ATOM 21 C2 G A 303 14.120 149.021 50.364 1.00 67.48 C
ATOM 22 N2 G A 303 15.082 149.170 49.432 1.00 65.11 N
ATOM 23 N3 G A 303 13.113 149.880 50.422 1.00 66.94 N
ATOM 24 C4 G A 303 12.240 149.573 51.406 1.00 66.72 C
ATOM 25 P A A 304 7.121 150.592 47.778 1.00 67.47 P
ATOM 26 OP1 A A 304 6.107 151.420 47.096 1.00 70.16 O
ATOM 27 OP2 A A 304 6.689 149.520 48.703 1.00 69.22 O
ATOM 28 O5' A A 304 8.046 149.961 46.655 1.00 66.81 O
TER
ATOM 1 O3' U B 323 19.569 147.539 40.839 1.00 60.86 O
ATOM 2 P G B 324 18.387 148.037 41.810 1.00 62.87 P
ATOM 3 OP1 G B 324 17.083 147.502 41.341 1.00 61.47 O
ATOM 4 OP2 G B 324 18.539 149.497 42.006 1.00 64.48 O
ATOM 5 O5' G B 324 18.768 147.370 43.198 1.00 63.02 O
ATOM 6 C5' G B 324 17.961 146.345 43.744 1.00 59.58 C
ATOM 7 C4' G B 324 17.613 146.683 45.158 1.00 57.24 C
ATOM 8 O4' G B 324 17.316 148.100 45.272 1.00 54.95 O
ATOM 9 C3' G B 324 16.385 145.944 45.646 1.00 56.95 C
ATOM 10 O3' G B 324 16.551 145.708 47.036 1.00 56.96 O
ATOM 11 C2' G B 324 15.281 146.955 45.348 1.00 56.88 C
ATOM 12 O2' G B 324 14.113 146.791 46.108 1.00 57.27 O
ATOM 13 C1' G B 324 15.979 148.266 45.696 1.00 57.55 C
ATOM 14 N9 G B 324 15.434 149.450 45.039 1.00 58.98 N
ATOM 15 C8 G B 324 15.516 149.767 43.705 1.00 59.40 C
ATOM 16 N7 G B 324 15.003 150.934 43.423 1.00 59.94 N
ATOM 17 C5 G B 324 14.539 151.412 44.640 1.00 59.56 C
ATOM 18 C6 G B 324 13.913 152.644 44.964 1.00 59.75 C
ATOM 19 O6 G B 324 13.642 153.587 44.218 1.00 61.64 O
ATOM 20 N1 G B 324 13.607 152.724 46.316 1.00 59.08 N
ATOM 21 C2 G B 324 13.871 151.749 47.241 1.00 59.84 C
ATOM 22 N2 G B 324 13.501 152.020 48.499 1.00 60.21 N
ATOM 23 N3 G B 324 14.460 150.596 46.955 1.00 60.12 N
ATOM 24 C4 G B 324 14.771 150.498 45.644 1.00 59.55 C
ATOM 25 P A B 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 26 OP1 A B 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 27 OP2 A B 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 28 O5' A B 325 16.229 143.283 47.637 1.00 58.24 O
TER
ATOM 2 P G A 303 6.499 149.896 53.383 1.00 65.23 P
ATOM 3 OP1 G A 303 7.407 150.371 54.454 1.00 66.18 O
ATOM 4 OP2 G A 303 5.061 150.255 53.438 1.00 66.28 O
ATOM 5 O5' G A 303 7.090 150.366 51.982 1.00 64.20 O
ATOM 6 C5' G A 303 7.103 151.752 51.618 1.00 65.08 C
ATOM 7 C4' G A 303 8.389 152.088 50.902 1.00 66.67 C
ATOM 8 O4' G A 303 9.504 151.972 51.819 1.00 67.37 O
ATOM 9 C3' G A 303 8.762 151.181 49.738 1.00 67.15 C
ATOM 10 O3' G A 303 8.096 151.601 48.556 1.00 68.17 O
ATOM 11 C2' G A 303 10.268 151.395 49.639 1.00 67.44 C
ATOM 12 O2' G A 303 10.618 152.606 48.996 1.00 66.78 O
ATOM 13 C1' G A 303 10.649 151.520 51.116 1.00 67.54 C
ATOM 14 N9 G A 303 11.110 150.281 51.734 1.00 66.89 N
ATOM 15 C8 G A 303 10.519 149.608 52.774 1.00 66.47 C
ATOM 16 N7 G A 303 11.188 148.555 53.146 1.00 67.57 N
ATOM 17 C5 G A 303 12.284 148.525 52.296 1.00 67.59 C
ATOM 18 C6 G A 303 13.370 147.617 52.233 1.00 68.38 C
ATOM 19 O6 G A 303 13.592 146.630 52.946 1.00 68.61 O
ATOM 20 N1 G A 303 14.258 147.950 51.213 1.00 68.44 N
ATOM 21 C2 G A 303 14.120 149.021 50.364 1.00 67.48 C
ATOM 22 N2 G A 303 15.082 149.170 49.432 1.00 65.11 N
ATOM 23 N3 G A 303 13.113 149.880 50.422 1.00 66.94 N
ATOM 24 C4 G A 303 12.240 149.573 51.406 1.00 66.72 C
ATOM 25 P A A 304 7.121 150.592 47.778 1.00 67.47 P
ATOM 26 OP1 A A 304 6.107 151.420 47.096 1.00 70.16 O
ATOM 27 OP2 A A 304 6.689 149.520 48.703 1.00 69.22 O
ATOM 28 O5' A A 304 8.046 149.961 46.655 1.00 66.81 O
TER
ATOM 1 O3' U B 323 19.569 147.539 40.839 1.00 60.86 O
ATOM 2 P G B 324 18.387 148.037 41.810 1.00 62.87 P
ATOM 3 OP1 G B 324 17.083 147.502 41.341 1.00 61.47 O
ATOM 4 OP2 G B 324 18.539 149.497 42.006 1.00 64.48 O
ATOM 5 O5' G B 324 18.768 147.370 43.198 1.00 63.02 O
ATOM 6 C5' G B 324 17.961 146.345 43.744 1.00 59.58 C
ATOM 7 C4' G B 324 17.613 146.683 45.158 1.00 57.24 C
ATOM 8 O4' G B 324 17.316 148.100 45.272 1.00 54.95 O
ATOM 9 C3' G B 324 16.385 145.944 45.646 1.00 56.95 C
ATOM 10 O3' G B 324 16.551 145.708 47.036 1.00 56.96 O
ATOM 11 C2' G B 324 15.281 146.955 45.348 1.00 56.88 C
ATOM 12 O2' G B 324 14.113 146.791 46.108 1.00 57.27 O
ATOM 13 C1' G B 324 15.979 148.266 45.696 1.00 57.55 C
ATOM 14 N9 G B 324 15.434 149.450 45.039 1.00 58.98 N
ATOM 15 C8 G B 324 15.516 149.767 43.705 1.00 59.40 C
ATOM 16 N7 G B 324 15.003 150.934 43.423 1.00 59.94 N
ATOM 17 C5 G B 324 14.539 151.412 44.640 1.00 59.56 C
ATOM 18 C6 G B 324 13.913 152.644 44.964 1.00 59.75 C
ATOM 19 O6 G B 324 13.642 153.587 44.218 1.00 61.64 O
ATOM 20 N1 G B 324 13.607 152.724 46.316 1.00 59.08 N
ATOM 21 C2 G B 324 13.871 151.749 47.241 1.00 59.84 C
ATOM 22 N2 G B 324 13.501 152.020 48.499 1.00 60.21 N
ATOM 23 N3 G B 324 14.460 150.596 46.955 1.00 60.12 N
ATOM 24 C4 G B 324 14.771 150.498 45.644 1.00 59.55 C
ATOM 25 P A B 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 26 OP1 A B 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 27 OP2 A B 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 28 O5' A B 325 16.229 143.283 47.637 1.00 58.24 O
TER
Atoms:
OP1: (7.407,150.371,54.454)
OP2: (5.061,150.255,53.438)
C3': (8.762,151.181,49.738)
C1': (10.649,151.520,51.116)
C5': (7.103,151.752,51.618)
O6: (13.592,146.630,52.946)
O4': (9.504,151.972,51.819)
C8: (10.519,149.608,52.774)
C2: (14.120,149.021,50.364)
C6: (13.370,147.617,52.233)
C5: (12.284,148.525,52.296)
C4: (12.240,149.573,51.406)
P: (6.499,149.896,53.383)
C4': (8.389,152.088,50.902)
C2': (10.268,151.395,49.639)
O2': (10.618,152.606,48.996)
N1: (14.258,147.950,51.213)
N2: (15.082,149.170,49.432)
N3: (13.113,149.880,50.422)
N7: (11.188,148.555,53.146)
N9: (11.110,150.281,51.734)
O5': (7.090,150.366,51.982)
O3': (8.096,151.601,48.556)
OP2: (5.061,150.255,53.438)
C3': (8.762,151.181,49.738)
C1': (10.649,151.520,51.116)
C5': (7.103,151.752,51.618)
O6: (13.592,146.630,52.946)
O4': (9.504,151.972,51.819)
C8: (10.519,149.608,52.774)
C2: (14.120,149.021,50.364)
C6: (13.370,147.617,52.233)
C5: (12.284,148.525,52.296)
C4: (12.240,149.573,51.406)
P: (6.499,149.896,53.383)
C4': (8.389,152.088,50.902)
C2': (10.268,151.395,49.639)
O2': (10.618,152.606,48.996)
N1: (14.258,147.950,51.213)
N2: (15.082,149.170,49.432)
N3: (13.113,149.880,50.422)
N7: (11.188,148.555,53.146)
N9: (11.110,150.281,51.734)
O5': (7.090,150.366,51.982)
O3': (8.096,151.601,48.556)
OP1: (17.083,147.502,41.341)
OP2: (18.539,149.497,42.006)
C3': (16.385,145.944,45.646)
C1': (15.979,148.266,45.696)
C5': (17.961,146.345,43.744)
O6: (13.642,153.587,44.218)
O4': (17.316,148.100,45.272)
C8: (15.516,149.767,43.705)
C2: (13.871,151.749,47.241)
C6: (13.913,152.644,44.964)
C5: (14.539,151.412,44.640)
C4: (14.771,150.498,45.644)
P: (18.387,148.037,41.810)
C4': (17.613,146.683,45.158)
C2': (15.281,146.955,45.348)
O2': (14.113,146.791,46.108)
N1: (13.607,152.724,46.316)
N2: (13.501,152.020,48.499)
N3: (14.460,150.596,46.955)
N7: (15.003,150.934,43.423)
N9: (15.434,149.450,45.039)
O5': (18.768,147.370,43.198)
O3': (16.551,145.708,47.036)
OP2: (18.539,149.497,42.006)
C3': (16.385,145.944,45.646)
C1': (15.979,148.266,45.696)
C5': (17.961,146.345,43.744)
O6: (13.642,153.587,44.218)
O4': (17.316,148.100,45.272)
C8: (15.516,149.767,43.705)
C2: (13.871,151.749,47.241)
C6: (13.913,152.644,44.964)
C5: (14.539,151.412,44.640)
C4: (14.771,150.498,45.644)
P: (18.387,148.037,41.810)
C4': (17.613,146.683,45.158)
C2': (15.281,146.955,45.348)
O2': (14.113,146.791,46.108)
N1: (13.607,152.724,46.316)
N2: (13.501,152.020,48.499)
N3: (14.460,150.596,46.955)
N7: (15.003,150.934,43.423)
N9: (15.434,149.450,45.039)
O5': (18.768,147.370,43.198)
O3': (16.551,145.708,47.036)
Image (generated by PyMOL):