Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0475:0500
Extra
PDB:
ATOM 1 O3' A A 474 21.445 164.067 51.440 1.00 59.48 O
ATOM 2 P G A 475 22.109 164.412 52.879 1.00 60.46 P
ATOM 3 OP1 G A 475 21.648 163.447 53.918 1.00 60.00 O
ATOM 4 OP2 G A 475 21.914 165.863 53.113 1.00 59.65 O
ATOM 5 O5' G A 475 23.675 164.205 52.656 1.00 59.85 O
ATOM 6 C5' G A 475 24.287 162.906 52.814 1.00 59.54 C
ATOM 7 C4' G A 475 24.924 162.788 54.183 1.00 59.28 C
ATOM 8 O4' G A 475 25.371 161.418 54.401 1.00 58.08 O
ATOM 9 C3' G A 475 26.150 163.668 54.441 1.00 59.42 C
ATOM 10 O3' G A 475 26.196 163.966 55.835 1.00 60.99 O
ATOM 11 C2' G A 475 27.293 162.715 54.133 1.00 58.58 C
ATOM 12 O2' G A 475 28.512 163.100 54.730 1.00 59.46 O
ATOM 13 C1' G A 475 26.738 161.431 54.746 1.00 57.02 C
ATOM 14 N9 G A 475 27.352 160.179 54.324 1.00 54.85 N
ATOM 15 C8 G A 475 27.988 159.906 53.136 1.00 54.65 C
ATOM 16 N7 G A 475 28.485 158.701 53.090 1.00 54.90 N
ATOM 17 C5 G A 475 28.144 158.143 54.316 1.00 54.50 C
ATOM 18 C6 G A 475 28.421 156.858 54.851 1.00 54.98 C
ATOM 19 O6 G A 475 29.060 155.928 54.337 1.00 57.74 O
ATOM 20 N1 G A 475 27.876 156.704 56.120 1.00 53.00 N
ATOM 21 C2 G A 475 27.164 157.661 56.793 1.00 53.85 C
ATOM 22 N2 G A 475 26.708 157.315 58.009 1.00 53.78 N
ATOM 23 N3 G A 475 26.912 158.868 56.313 1.00 54.14 N
ATOM 24 C4 G A 475 27.429 159.037 55.078 1.00 54.19 C
ATOM 25 P U A 476 26.841 165.341 56.354 1.00 61.27 P
ATOM 26 OP1 U A 476 27.249 166.145 55.171 1.00 59.36 O
ATOM 27 OP2 U A 476 27.850 165.012 57.399 1.00 61.58 O
ATOM 28 O5' U A 476 25.611 166.038 57.084 1.00 60.78 O
TER
ATOM 1 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 2 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 3 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 4 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 5 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
ATOM 6 C5' G B 500 25.456 154.771 61.604 1.00 57.75 C
ATOM 7 C4' G B 500 26.252 156.048 61.526 1.00 60.36 C
ATOM 8 O4' G B 500 25.488 157.060 60.822 1.00 61.09 O
ATOM 9 C3' G B 500 26.625 156.666 62.871 1.00 62.65 C
ATOM 10 O3' G B 500 27.858 157.353 62.730 1.00 65.22 O
ATOM 11 C2' G B 500 25.521 157.689 63.081 1.00 61.68 C
ATOM 12 O2' G B 500 25.919 158.740 63.935 1.00 61.11 O
ATOM 13 C1' G B 500 25.332 158.193 61.653 1.00 62.99 C
ATOM 14 N9 G B 500 24.040 158.812 61.365 1.00 65.62 N
ATOM 15 C8 G B 500 22.928 158.855 62.176 1.00 65.75 C
ATOM 16 N7 G B 500 21.937 159.519 61.649 1.00 66.69 N
ATOM 17 C5 G B 500 22.416 159.934 60.413 1.00 66.60 C
ATOM 18 C6 G B 500 21.790 160.691 59.399 1.00 65.79 C
ATOM 19 O6 G B 500 20.659 161.171 59.394 1.00 65.89 O
ATOM 20 N1 G B 500 22.627 160.874 58.303 1.00 66.00 N
ATOM 21 C2 G B 500 23.906 160.388 58.198 1.00 66.27 C
ATOM 22 N2 G B 500 24.554 160.658 57.057 1.00 66.33 N
ATOM 23 N3 G B 500 24.506 159.685 59.141 1.00 66.39 N
ATOM 24 C4 G B 500 23.707 159.497 60.215 1.00 66.58 C
ATOM 25 P A B 501 29.022 157.152 63.816 1.00 66.77 P
ATOM 26 OP1 A B 501 28.628 156.096 64.795 1.00 63.94 O
ATOM 27 OP2 A B 501 29.367 158.515 64.300 1.00 67.96 O
ATOM 28 O5' A B 501 30.241 156.611 62.949 1.00 66.15 O
TER
ATOM 2 P G A 475 22.109 164.412 52.879 1.00 60.46 P
ATOM 3 OP1 G A 475 21.648 163.447 53.918 1.00 60.00 O
ATOM 4 OP2 G A 475 21.914 165.863 53.113 1.00 59.65 O
ATOM 5 O5' G A 475 23.675 164.205 52.656 1.00 59.85 O
ATOM 6 C5' G A 475 24.287 162.906 52.814 1.00 59.54 C
ATOM 7 C4' G A 475 24.924 162.788 54.183 1.00 59.28 C
ATOM 8 O4' G A 475 25.371 161.418 54.401 1.00 58.08 O
ATOM 9 C3' G A 475 26.150 163.668 54.441 1.00 59.42 C
ATOM 10 O3' G A 475 26.196 163.966 55.835 1.00 60.99 O
ATOM 11 C2' G A 475 27.293 162.715 54.133 1.00 58.58 C
ATOM 12 O2' G A 475 28.512 163.100 54.730 1.00 59.46 O
ATOM 13 C1' G A 475 26.738 161.431 54.746 1.00 57.02 C
ATOM 14 N9 G A 475 27.352 160.179 54.324 1.00 54.85 N
ATOM 15 C8 G A 475 27.988 159.906 53.136 1.00 54.65 C
ATOM 16 N7 G A 475 28.485 158.701 53.090 1.00 54.90 N
ATOM 17 C5 G A 475 28.144 158.143 54.316 1.00 54.50 C
ATOM 18 C6 G A 475 28.421 156.858 54.851 1.00 54.98 C
ATOM 19 O6 G A 475 29.060 155.928 54.337 1.00 57.74 O
ATOM 20 N1 G A 475 27.876 156.704 56.120 1.00 53.00 N
ATOM 21 C2 G A 475 27.164 157.661 56.793 1.00 53.85 C
ATOM 22 N2 G A 475 26.708 157.315 58.009 1.00 53.78 N
ATOM 23 N3 G A 475 26.912 158.868 56.313 1.00 54.14 N
ATOM 24 C4 G A 475 27.429 159.037 55.078 1.00 54.19 C
ATOM 25 P U A 476 26.841 165.341 56.354 1.00 61.27 P
ATOM 26 OP1 U A 476 27.249 166.145 55.171 1.00 59.36 O
ATOM 27 OP2 U A 476 27.850 165.012 57.399 1.00 61.58 O
ATOM 28 O5' U A 476 25.611 166.038 57.084 1.00 60.78 O
TER
ATOM 1 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 2 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 3 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 4 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 5 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
ATOM 6 C5' G B 500 25.456 154.771 61.604 1.00 57.75 C
ATOM 7 C4' G B 500 26.252 156.048 61.526 1.00 60.36 C
ATOM 8 O4' G B 500 25.488 157.060 60.822 1.00 61.09 O
ATOM 9 C3' G B 500 26.625 156.666 62.871 1.00 62.65 C
ATOM 10 O3' G B 500 27.858 157.353 62.730 1.00 65.22 O
ATOM 11 C2' G B 500 25.521 157.689 63.081 1.00 61.68 C
ATOM 12 O2' G B 500 25.919 158.740 63.935 1.00 61.11 O
ATOM 13 C1' G B 500 25.332 158.193 61.653 1.00 62.99 C
ATOM 14 N9 G B 500 24.040 158.812 61.365 1.00 65.62 N
ATOM 15 C8 G B 500 22.928 158.855 62.176 1.00 65.75 C
ATOM 16 N7 G B 500 21.937 159.519 61.649 1.00 66.69 N
ATOM 17 C5 G B 500 22.416 159.934 60.413 1.00 66.60 C
ATOM 18 C6 G B 500 21.790 160.691 59.399 1.00 65.79 C
ATOM 19 O6 G B 500 20.659 161.171 59.394 1.00 65.89 O
ATOM 20 N1 G B 500 22.627 160.874 58.303 1.00 66.00 N
ATOM 21 C2 G B 500 23.906 160.388 58.198 1.00 66.27 C
ATOM 22 N2 G B 500 24.554 160.658 57.057 1.00 66.33 N
ATOM 23 N3 G B 500 24.506 159.685 59.141 1.00 66.39 N
ATOM 24 C4 G B 500 23.707 159.497 60.215 1.00 66.58 C
ATOM 25 P A B 501 29.022 157.152 63.816 1.00 66.77 P
ATOM 26 OP1 A B 501 28.628 156.096 64.795 1.00 63.94 O
ATOM 27 OP2 A B 501 29.367 158.515 64.300 1.00 67.96 O
ATOM 28 O5' A B 501 30.241 156.611 62.949 1.00 66.15 O
TER
Atoms:
OP1: (21.648,163.447,53.918)
OP2: (21.914,165.863,53.113)
C3': (26.150,163.668,54.441)
C1': (26.738,161.431,54.746)
C5': (24.287,162.906,52.814)
O6: (29.060,155.928,54.337)
O4': (25.371,161.418,54.401)
C8: (27.988,159.906,53.136)
C2: (27.164,157.661,56.793)
C6: (28.421,156.858,54.851)
C5: (28.144,158.143,54.316)
C4: (27.429,159.037,55.078)
P: (22.109,164.412,52.879)
C4': (24.924,162.788,54.183)
C2': (27.293,162.715,54.133)
O2': (28.512,163.100,54.730)
N1: (27.876,156.704,56.120)
N2: (26.708,157.315,58.009)
N3: (26.912,158.868,56.313)
N7: (28.485,158.701,53.090)
N9: (27.352,160.179,54.324)
O5': (23.675,164.205,52.656)
O3': (26.196,163.966,55.835)
OP2: (21.914,165.863,53.113)
C3': (26.150,163.668,54.441)
C1': (26.738,161.431,54.746)
C5': (24.287,162.906,52.814)
O6: (29.060,155.928,54.337)
O4': (25.371,161.418,54.401)
C8: (27.988,159.906,53.136)
C2: (27.164,157.661,56.793)
C6: (28.421,156.858,54.851)
C5: (28.144,158.143,54.316)
C4: (27.429,159.037,55.078)
P: (22.109,164.412,52.879)
C4': (24.924,162.788,54.183)
C2': (27.293,162.715,54.133)
O2': (28.512,163.100,54.730)
N1: (27.876,156.704,56.120)
N2: (26.708,157.315,58.009)
N3: (26.912,158.868,56.313)
N7: (28.485,158.701,53.090)
N9: (27.352,160.179,54.324)
O5': (23.675,164.205,52.656)
O3': (26.196,163.966,55.835)
OP1: (25.045,153.534,64.396)
OP2: (22.576,154.129,64.051)
C3': (26.625,156.666,62.871)
C1': (25.332,158.193,61.653)
C5': (25.456,154.771,61.604)
O6: (20.659,161.171,59.394)
O4': (25.488,157.060,60.822)
C8: (22.928,158.855,62.176)
C2: (23.906,160.388,58.198)
C6: (21.790,160.691,59.399)
C5: (22.416,159.934,60.413)
C4: (23.707,159.497,60.215)
P: (23.909,153.790,63.480)
C4': (26.252,156.048,61.526)
C2': (25.521,157.689,63.081)
O2': (25.919,158.740,63.935)
N1: (22.627,160.874,58.303)
N2: (24.554,160.658,57.057)
N3: (24.506,159.685,59.141)
N7: (21.937,159.519,61.649)
N9: (24.040,158.812,61.365)
O5': (24.336,154.945,62.479)
O3': (27.858,157.353,62.730)
OP2: (22.576,154.129,64.051)
C3': (26.625,156.666,62.871)
C1': (25.332,158.193,61.653)
C5': (25.456,154.771,61.604)
O6: (20.659,161.171,59.394)
O4': (25.488,157.060,60.822)
C8: (22.928,158.855,62.176)
C2: (23.906,160.388,58.198)
C6: (21.790,160.691,59.399)
C5: (22.416,159.934,60.413)
C4: (23.707,159.497,60.215)
P: (23.909,153.790,63.480)
C4': (26.252,156.048,61.526)
C2': (25.521,157.689,63.081)
O2': (25.919,158.740,63.935)
N1: (22.627,160.874,58.303)
N2: (24.554,160.658,57.057)
N3: (24.506,159.685,59.141)
N7: (21.937,159.519,61.649)
N9: (24.040,158.812,61.365)
O5': (24.336,154.945,62.479)
O3': (27.858,157.353,62.730)
Image (generated by PyMOL):