Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:I9:I10
Extra
PDB:
ATOM 1 O3' G A 8 -4.477 9.508 58.989 1.00 40.96 O
ATOM 2 P A A 9 -5.006 11.002 58.690 1.00 38.03 P
ATOM 3 OP1 A A 9 -6.444 10.926 58.338 1.00 38.71 O
ATOM 4 OP2 A A 9 -4.562 11.872 59.794 1.00 34.29 O
ATOM 5 O5' A A 9 -4.145 11.372 57.429 1.00 40.67 O
ATOM 6 C5' A A 9 -4.625 12.405 56.593 1.00 43.31 C
ATOM 7 C4' A A 9 -4.266 12.167 55.155 1.00 48.13 C
ATOM 8 O4' A A 9 -4.559 13.389 54.433 1.00 48.90 O
ATOM 9 C3' A A 9 -2.791 11.873 54.898 1.00 46.19 C
ATOM 10 O3' A A 9 -2.680 11.069 53.706 1.00 47.15 O
ATOM 11 C2' A A 9 -2.237 13.286 54.677 1.00 45.22 C
ATOM 12 O2' A A 9 -1.030 13.350 53.964 1.00 44.56 O
ATOM 13 C1' A A 9 -3.373 13.913 53.886 1.00 47.13 C
ATOM 14 N9 A A 9 -3.497 15.361 53.951 1.00 46.87 N
ATOM 15 C8 A A 9 -3.729 16.150 52.871 1.00 47.98 C
ATOM 16 N7 A A 9 -3.828 17.420 53.130 1.00 47.67 N
ATOM 17 C5 A A 9 -3.677 17.471 54.498 1.00 46.26 C
ATOM 18 C6 A A 9 -3.703 18.562 55.374 1.00 45.34 C
ATOM 19 N6 A A 9 -3.887 19.820 54.968 1.00 44.15 N
ATOM 20 N1 A A 9 -3.535 18.296 56.681 1.00 39.72 N
ATOM 21 C2 A A 9 -3.352 17.023 57.052 1.00 38.42 C
ATOM 22 N3 A A 9 -3.314 15.917 56.315 1.00 41.76 N
ATOM 23 C4 A A 9 -3.488 16.208 55.023 1.00 45.78 C
ATOM 24 P U A 10 -2.613 9.448 53.557 1.00 47.66 P
ATOM 25 OP1 U A 10 -3.493 9.077 52.443 1.00 49.95 O
ATOM 26 OP2 U A 10 -2.807 8.697 54.809 1.00 47.17 O
ATOM 27 O5' U A 10 -1.100 9.341 53.150 1.00 46.38 O
TER
ATOM 1 O3' A B 9 -2.680 11.069 53.706 1.00 47.15 O
ATOM 2 P U B 10 -2.613 9.448 53.557 1.00 47.66 P
ATOM 3 OP1 U B 10 -3.493 9.077 52.443 1.00 49.95 O
ATOM 4 OP2 U B 10 -2.807 8.697 54.809 1.00 47.17 O
ATOM 5 O5' U B 10 -1.100 9.341 53.150 1.00 46.38 O
ATOM 6 C5' U B 10 -0.239 9.622 54.234 1.00 45.15 C
ATOM 7 C4' U B 10 1.215 9.606 53.867 1.00 45.13 C
ATOM 8 O4' U B 10 1.807 10.672 54.651 1.00 44.58 O
ATOM 9 C3' U B 10 1.937 8.329 54.276 1.00 45.93 C
ATOM 10 O3' U B 10 2.419 7.550 53.187 1.00 46.79 O
ATOM 11 C2' U B 10 3.060 8.755 55.224 1.00 46.26 C
ATOM 12 O2' U B 10 4.325 8.761 54.605 1.00 47.70 O
ATOM 13 C1' U B 10 2.745 10.191 55.593 1.00 45.15 C
ATOM 14 N1 U B 10 2.075 10.201 56.948 1.00 44.37 N
ATOM 15 C2 U B 10 2.816 10.296 58.125 1.00 43.37 C
ATOM 16 O2 U B 10 4.029 10.373 58.153 1.00 45.07 O
ATOM 17 N3 U B 10 2.106 10.305 59.302 1.00 39.49 N
ATOM 18 C4 U B 10 0.744 10.228 59.432 1.00 37.87 C
ATOM 19 O4 U B 10 0.234 10.260 60.542 1.00 35.10 O
ATOM 20 C5 U B 10 0.037 10.127 58.199 1.00 40.57 C
ATOM 21 C6 U B 10 0.706 10.112 57.048 1.00 43.81 C
ATOM 22 P U B 11 1.985 5.981 53.261 1.00 47.25 P
ATOM 23 OP1 U B 11 0.511 5.839 53.373 1.00 47.17 O
ATOM 24 OP2 U B 11 2.708 5.365 52.123 1.00 48.08 O
ATOM 25 O5' U B 11 2.630 5.498 54.629 1.00 47.54 O
TER
ATOM 2 P A A 9 -5.006 11.002 58.690 1.00 38.03 P
ATOM 3 OP1 A A 9 -6.444 10.926 58.338 1.00 38.71 O
ATOM 4 OP2 A A 9 -4.562 11.872 59.794 1.00 34.29 O
ATOM 5 O5' A A 9 -4.145 11.372 57.429 1.00 40.67 O
ATOM 6 C5' A A 9 -4.625 12.405 56.593 1.00 43.31 C
ATOM 7 C4' A A 9 -4.266 12.167 55.155 1.00 48.13 C
ATOM 8 O4' A A 9 -4.559 13.389 54.433 1.00 48.90 O
ATOM 9 C3' A A 9 -2.791 11.873 54.898 1.00 46.19 C
ATOM 10 O3' A A 9 -2.680 11.069 53.706 1.00 47.15 O
ATOM 11 C2' A A 9 -2.237 13.286 54.677 1.00 45.22 C
ATOM 12 O2' A A 9 -1.030 13.350 53.964 1.00 44.56 O
ATOM 13 C1' A A 9 -3.373 13.913 53.886 1.00 47.13 C
ATOM 14 N9 A A 9 -3.497 15.361 53.951 1.00 46.87 N
ATOM 15 C8 A A 9 -3.729 16.150 52.871 1.00 47.98 C
ATOM 16 N7 A A 9 -3.828 17.420 53.130 1.00 47.67 N
ATOM 17 C5 A A 9 -3.677 17.471 54.498 1.00 46.26 C
ATOM 18 C6 A A 9 -3.703 18.562 55.374 1.00 45.34 C
ATOM 19 N6 A A 9 -3.887 19.820 54.968 1.00 44.15 N
ATOM 20 N1 A A 9 -3.535 18.296 56.681 1.00 39.72 N
ATOM 21 C2 A A 9 -3.352 17.023 57.052 1.00 38.42 C
ATOM 22 N3 A A 9 -3.314 15.917 56.315 1.00 41.76 N
ATOM 23 C4 A A 9 -3.488 16.208 55.023 1.00 45.78 C
ATOM 24 P U A 10 -2.613 9.448 53.557 1.00 47.66 P
ATOM 25 OP1 U A 10 -3.493 9.077 52.443 1.00 49.95 O
ATOM 26 OP2 U A 10 -2.807 8.697 54.809 1.00 47.17 O
ATOM 27 O5' U A 10 -1.100 9.341 53.150 1.00 46.38 O
TER
ATOM 1 O3' A B 9 -2.680 11.069 53.706 1.00 47.15 O
ATOM 2 P U B 10 -2.613 9.448 53.557 1.00 47.66 P
ATOM 3 OP1 U B 10 -3.493 9.077 52.443 1.00 49.95 O
ATOM 4 OP2 U B 10 -2.807 8.697 54.809 1.00 47.17 O
ATOM 5 O5' U B 10 -1.100 9.341 53.150 1.00 46.38 O
ATOM 6 C5' U B 10 -0.239 9.622 54.234 1.00 45.15 C
ATOM 7 C4' U B 10 1.215 9.606 53.867 1.00 45.13 C
ATOM 8 O4' U B 10 1.807 10.672 54.651 1.00 44.58 O
ATOM 9 C3' U B 10 1.937 8.329 54.276 1.00 45.93 C
ATOM 10 O3' U B 10 2.419 7.550 53.187 1.00 46.79 O
ATOM 11 C2' U B 10 3.060 8.755 55.224 1.00 46.26 C
ATOM 12 O2' U B 10 4.325 8.761 54.605 1.00 47.70 O
ATOM 13 C1' U B 10 2.745 10.191 55.593 1.00 45.15 C
ATOM 14 N1 U B 10 2.075 10.201 56.948 1.00 44.37 N
ATOM 15 C2 U B 10 2.816 10.296 58.125 1.00 43.37 C
ATOM 16 O2 U B 10 4.029 10.373 58.153 1.00 45.07 O
ATOM 17 N3 U B 10 2.106 10.305 59.302 1.00 39.49 N
ATOM 18 C4 U B 10 0.744 10.228 59.432 1.00 37.87 C
ATOM 19 O4 U B 10 0.234 10.260 60.542 1.00 35.10 O
ATOM 20 C5 U B 10 0.037 10.127 58.199 1.00 40.57 C
ATOM 21 C6 U B 10 0.706 10.112 57.048 1.00 43.81 C
ATOM 22 P U B 11 1.985 5.981 53.261 1.00 47.25 P
ATOM 23 OP1 U B 11 0.511 5.839 53.373 1.00 47.17 O
ATOM 24 OP2 U B 11 2.708 5.365 52.123 1.00 48.08 O
ATOM 25 O5' U B 11 2.630 5.498 54.629 1.00 47.54 O
TER
Atoms:
OP1: (-6.444,10.926,58.338)
OP2: (-4.562,11.872,59.794)
C3': (-2.791,11.873,54.898)
C1': (-3.373,13.913,53.886)
C5': (-4.625,12.405,56.593)
O4': (-4.559,13.389,54.433)
C8: (-3.729,16.150,52.871)
O2': (-1.030,13.350,53.964)
C6: (-3.703,18.562,55.374)
C5: (-3.677,17.471,54.498)
C4: (-3.488,16.208,55.023)
P: (-5.006,11.002,58.690)
C4': (-4.266,12.167,55.155)
C2': (-2.237,13.286,54.677)
C2: (-3.352,17.023,57.052)
N1: (-3.535,18.296,56.681)
N3: (-3.314,15.917,56.315)
N6: (-3.887,19.820,54.968)
N7: (-3.828,17.420,53.130)
N9: (-3.497,15.361,53.951)
O5': (-4.145,11.372,57.429)
O3': (-2.680,11.069,53.706)
OP2: (-4.562,11.872,59.794)
C3': (-2.791,11.873,54.898)
C1': (-3.373,13.913,53.886)
C5': (-4.625,12.405,56.593)
O4': (-4.559,13.389,54.433)
C8: (-3.729,16.150,52.871)
O2': (-1.030,13.350,53.964)
C6: (-3.703,18.562,55.374)
C5: (-3.677,17.471,54.498)
C4: (-3.488,16.208,55.023)
P: (-5.006,11.002,58.690)
C4': (-4.266,12.167,55.155)
C2': (-2.237,13.286,54.677)
C2: (-3.352,17.023,57.052)
N1: (-3.535,18.296,56.681)
N3: (-3.314,15.917,56.315)
N6: (-3.887,19.820,54.968)
N7: (-3.828,17.420,53.130)
N9: (-3.497,15.361,53.951)
O5': (-4.145,11.372,57.429)
O3': (-2.680,11.069,53.706)
C4: (0.744,10.228,59.432)
N3: (2.106,10.305,59.302)
OP1: (-3.493,9.077,52.443)
OP2: (-2.807,8.697,54.809)
C2: (2.816,10.296,58.125)
C1': (2.745,10.191,55.593)
C3': (1.937,8.329,54.276)
O5': (-1.100,9.341,53.150)
O4': (1.807,10.672,54.651)
C5': (-0.239,9.622,54.234)
P: (-2.613,9.448,53.557)
C4': (1.215,9.606,53.867)
C2': (3.060,8.755,55.224)
O2': (4.325,8.761,54.605)
N1: (2.075,10.201,56.948)
O4: (0.234,10.260,60.542)
O2: (4.029,10.373,58.153)
C6: (0.706,10.112,57.048)
C5: (0.037,10.127,58.199)
O3': (2.419,7.550,53.187)
N3: (2.106,10.305,59.302)
OP1: (-3.493,9.077,52.443)
OP2: (-2.807,8.697,54.809)
C2: (2.816,10.296,58.125)
C1': (2.745,10.191,55.593)
C3': (1.937,8.329,54.276)
O5': (-1.100,9.341,53.150)
O4': (1.807,10.672,54.651)
C5': (-0.239,9.622,54.234)
P: (-2.613,9.448,53.557)
C4': (1.215,9.606,53.867)
C2': (3.060,8.755,55.224)
O2': (4.325,8.761,54.605)
N1: (2.075,10.201,56.948)
O4: (0.234,10.260,60.542)
O2: (4.029,10.373,58.153)
C6: (0.706,10.112,57.048)
C5: (0.037,10.127,58.199)
O3': (2.419,7.550,53.187)
Image (generated by PyMOL):