Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:022:0444
Extra
PDB:
ATOM 1 O3' C A 21 38.716 139.566 44.128 1.00 45.85 O
ATOM 2 P G A 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 3 OP1 G A 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 4 OP2 G A 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 5 O5' G A 22 40.544 137.933 44.616 1.00 42.10 O
ATOM 6 C5' G A 22 41.251 138.838 45.467 1.00 39.17 C
ATOM 7 C4' G A 22 41.748 138.093 46.672 1.00 39.16 C
ATOM 8 O4' G A 22 40.609 137.630 47.443 1.00 41.12 O
ATOM 9 C3' G A 22 42.504 136.818 46.341 1.00 38.52 C
ATOM 10 O3' G A 22 43.854 137.107 46.025 1.00 36.87 O
ATOM 11 C2' G A 22 42.330 135.996 47.610 1.00 40.60 C
ATOM 12 O2' G A 22 43.199 136.403 48.647 1.00 41.49 O
ATOM 13 C1' G A 22 40.892 136.356 48.000 1.00 42.92 C
ATOM 14 N9 G A 22 39.895 135.392 47.532 1.00 44.96 N
ATOM 15 C8 G A 22 39.101 135.469 46.411 1.00 45.15 C
ATOM 16 N7 G A 22 38.348 134.415 46.241 1.00 46.40 N
ATOM 17 C5 G A 22 38.651 133.598 47.321 1.00 47.90 C
ATOM 18 C6 G A 22 38.157 132.309 47.680 1.00 47.41 C
ATOM 19 O6 G A 22 37.319 131.614 47.102 1.00 45.44 O
ATOM 20 N1 G A 22 38.747 131.847 48.855 1.00 48.49 N
ATOM 21 C2 G A 22 39.679 132.531 49.599 1.00 47.86 C
ATOM 22 N2 G A 22 40.133 131.924 50.700 1.00 46.48 N
ATOM 23 N3 G A 22 40.136 133.727 49.283 1.00 48.88 N
ATOM 24 C4 G A 22 39.591 134.195 48.136 1.00 47.70 C
ATOM 25 P G A 23 44.794 135.960 45.434 1.00 37.05 P
ATOM 26 OP1 G A 23 46.096 136.565 45.116 1.00 35.90 O
ATOM 27 OP2 G A 23 44.054 135.219 44.388 1.00 35.20 O
ATOM 28 O5' G A 23 45.013 135.008 46.684 1.00 37.80 O
TER
ATOM 1 O3' A B 443 42.023 127.014 58.029 1.00 32.96 O
ATOM 2 P G B 444 43.458 126.752 57.380 1.00 34.68 P
ATOM 3 OP1 G B 444 43.674 125.279 57.366 1.00 33.35 O
ATOM 4 OP2 G B 444 44.430 127.630 58.068 1.00 33.22 O
ATOM 5 O5' G B 444 43.297 127.267 55.879 1.00 34.20 O
ATOM 6 C5' G B 444 42.489 126.541 54.932 1.00 32.13 C
ATOM 7 C4' G B 444 42.272 127.353 53.680 1.00 29.46 C
ATOM 8 O4' G B 444 41.496 128.546 53.985 1.00 31.45 O
ATOM 9 C3' G B 444 43.511 127.909 53.018 1.00 28.33 C
ATOM 10 O3' G B 444 44.213 126.935 52.263 1.00 26.94 O
ATOM 11 C2' G B 444 42.915 129.010 52.156 1.00 29.72 C
ATOM 12 O2' G B 444 42.251 128.483 51.033 1.00 29.64 O
ATOM 13 C1' G B 444 41.875 129.601 53.108 1.00 32.04 C
ATOM 14 N9 G B 444 42.447 130.687 53.902 1.00 35.87 N
ATOM 15 C8 G B 444 42.904 130.607 55.200 1.00 37.54 C
ATOM 16 N7 G B 444 43.442 131.716 55.627 1.00 36.19 N
ATOM 17 C5 G B 444 43.321 132.590 54.559 1.00 37.55 C
ATOM 18 C6 G B 444 43.748 133.934 54.428 1.00 37.98 C
ATOM 19 O6 G B 444 44.341 134.634 55.252 1.00 35.89 O
ATOM 20 N1 G B 444 43.425 134.455 53.176 1.00 38.56 N
ATOM 21 C2 G B 444 42.778 133.769 52.177 1.00 38.00 C
ATOM 22 N2 G B 444 42.564 134.453 51.049 1.00 37.13 N
ATOM 23 N3 G B 444 42.376 132.506 52.282 1.00 37.62 N
ATOM 24 C4 G B 444 42.684 131.981 53.491 1.00 37.34 C
ATOM 25 P U B 445 45.811 126.814 52.419 1.00 26.40 P
ATOM 26 OP1 U B 445 46.305 125.717 51.562 1.00 26.18 O
ATOM 27 OP2 U B 445 46.082 126.777 53.870 1.00 27.02 O
ATOM 28 O5' U B 445 46.379 128.188 51.844 1.00 26.93 O
TER
ATOM 2 P G A 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 3 OP1 G A 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 4 OP2 G A 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 5 O5' G A 22 40.544 137.933 44.616 1.00 42.10 O
ATOM 6 C5' G A 22 41.251 138.838 45.467 1.00 39.17 C
ATOM 7 C4' G A 22 41.748 138.093 46.672 1.00 39.16 C
ATOM 8 O4' G A 22 40.609 137.630 47.443 1.00 41.12 O
ATOM 9 C3' G A 22 42.504 136.818 46.341 1.00 38.52 C
ATOM 10 O3' G A 22 43.854 137.107 46.025 1.00 36.87 O
ATOM 11 C2' G A 22 42.330 135.996 47.610 1.00 40.60 C
ATOM 12 O2' G A 22 43.199 136.403 48.647 1.00 41.49 O
ATOM 13 C1' G A 22 40.892 136.356 48.000 1.00 42.92 C
ATOM 14 N9 G A 22 39.895 135.392 47.532 1.00 44.96 N
ATOM 15 C8 G A 22 39.101 135.469 46.411 1.00 45.15 C
ATOM 16 N7 G A 22 38.348 134.415 46.241 1.00 46.40 N
ATOM 17 C5 G A 22 38.651 133.598 47.321 1.00 47.90 C
ATOM 18 C6 G A 22 38.157 132.309 47.680 1.00 47.41 C
ATOM 19 O6 G A 22 37.319 131.614 47.102 1.00 45.44 O
ATOM 20 N1 G A 22 38.747 131.847 48.855 1.00 48.49 N
ATOM 21 C2 G A 22 39.679 132.531 49.599 1.00 47.86 C
ATOM 22 N2 G A 22 40.133 131.924 50.700 1.00 46.48 N
ATOM 23 N3 G A 22 40.136 133.727 49.283 1.00 48.88 N
ATOM 24 C4 G A 22 39.591 134.195 48.136 1.00 47.70 C
ATOM 25 P G A 23 44.794 135.960 45.434 1.00 37.05 P
ATOM 26 OP1 G A 23 46.096 136.565 45.116 1.00 35.90 O
ATOM 27 OP2 G A 23 44.054 135.219 44.388 1.00 35.20 O
ATOM 28 O5' G A 23 45.013 135.008 46.684 1.00 37.80 O
TER
ATOM 1 O3' A B 443 42.023 127.014 58.029 1.00 32.96 O
ATOM 2 P G B 444 43.458 126.752 57.380 1.00 34.68 P
ATOM 3 OP1 G B 444 43.674 125.279 57.366 1.00 33.35 O
ATOM 4 OP2 G B 444 44.430 127.630 58.068 1.00 33.22 O
ATOM 5 O5' G B 444 43.297 127.267 55.879 1.00 34.20 O
ATOM 6 C5' G B 444 42.489 126.541 54.932 1.00 32.13 C
ATOM 7 C4' G B 444 42.272 127.353 53.680 1.00 29.46 C
ATOM 8 O4' G B 444 41.496 128.546 53.985 1.00 31.45 O
ATOM 9 C3' G B 444 43.511 127.909 53.018 1.00 28.33 C
ATOM 10 O3' G B 444 44.213 126.935 52.263 1.00 26.94 O
ATOM 11 C2' G B 444 42.915 129.010 52.156 1.00 29.72 C
ATOM 12 O2' G B 444 42.251 128.483 51.033 1.00 29.64 O
ATOM 13 C1' G B 444 41.875 129.601 53.108 1.00 32.04 C
ATOM 14 N9 G B 444 42.447 130.687 53.902 1.00 35.87 N
ATOM 15 C8 G B 444 42.904 130.607 55.200 1.00 37.54 C
ATOM 16 N7 G B 444 43.442 131.716 55.627 1.00 36.19 N
ATOM 17 C5 G B 444 43.321 132.590 54.559 1.00 37.55 C
ATOM 18 C6 G B 444 43.748 133.934 54.428 1.00 37.98 C
ATOM 19 O6 G B 444 44.341 134.634 55.252 1.00 35.89 O
ATOM 20 N1 G B 444 43.425 134.455 53.176 1.00 38.56 N
ATOM 21 C2 G B 444 42.778 133.769 52.177 1.00 38.00 C
ATOM 22 N2 G B 444 42.564 134.453 51.049 1.00 37.13 N
ATOM 23 N3 G B 444 42.376 132.506 52.282 1.00 37.62 N
ATOM 24 C4 G B 444 42.684 131.981 53.491 1.00 37.34 C
ATOM 25 P U B 445 45.811 126.814 52.419 1.00 26.40 P
ATOM 26 OP1 U B 445 46.305 125.717 51.562 1.00 26.18 O
ATOM 27 OP2 U B 445 46.082 126.777 53.870 1.00 27.02 O
ATOM 28 O5' U B 445 46.379 128.188 51.844 1.00 26.93 O
TER
Atoms:
OP1: (40.506,139.135,42.459)
OP2: (38.776,137.320,42.997)
C3': (42.504,136.818,46.341)
C1': (40.892,136.356,48.000)
C5': (41.251,138.838,45.467)
O6: (37.319,131.614,47.102)
O4': (40.609,137.630,47.443)
C8: (39.101,135.469,46.411)
C2: (39.679,132.531,49.599)
C6: (38.157,132.309,47.680)
C5: (38.651,133.598,47.321)
C4: (39.591,134.195,48.136)
P: (39.628,138.454,43.435)
C4': (41.748,138.093,46.672)
C2': (42.330,135.996,47.610)
O2': (43.199,136.403,48.647)
N1: (38.747,131.847,48.855)
N2: (40.133,131.924,50.700)
N3: (40.136,133.727,49.283)
N7: (38.348,134.415,46.241)
N9: (39.895,135.392,47.532)
O5': (40.544,137.933,44.616)
O3': (43.854,137.107,46.025)
OP2: (38.776,137.320,42.997)
C3': (42.504,136.818,46.341)
C1': (40.892,136.356,48.000)
C5': (41.251,138.838,45.467)
O6: (37.319,131.614,47.102)
O4': (40.609,137.630,47.443)
C8: (39.101,135.469,46.411)
C2: (39.679,132.531,49.599)
C6: (38.157,132.309,47.680)
C5: (38.651,133.598,47.321)
C4: (39.591,134.195,48.136)
P: (39.628,138.454,43.435)
C4': (41.748,138.093,46.672)
C2': (42.330,135.996,47.610)
O2': (43.199,136.403,48.647)
N1: (38.747,131.847,48.855)
N2: (40.133,131.924,50.700)
N3: (40.136,133.727,49.283)
N7: (38.348,134.415,46.241)
N9: (39.895,135.392,47.532)
O5': (40.544,137.933,44.616)
O3': (43.854,137.107,46.025)
OP1: (43.674,125.279,57.366)
OP2: (44.430,127.630,58.068)
C3': (43.511,127.909,53.018)
C1': (41.875,129.601,53.108)
C5': (42.489,126.541,54.932)
O6: (44.341,134.634,55.252)
O4': (41.496,128.546,53.985)
C8: (42.904,130.607,55.200)
C2: (42.778,133.769,52.177)
C6: (43.748,133.934,54.428)
C5: (43.321,132.590,54.559)
C4: (42.684,131.981,53.491)
P: (43.458,126.752,57.380)
C4': (42.272,127.353,53.680)
C2': (42.915,129.010,52.156)
O2': (42.251,128.483,51.033)
N1: (43.425,134.455,53.176)
N2: (42.564,134.453,51.049)
N3: (42.376,132.506,52.282)
N7: (43.442,131.716,55.627)
N9: (42.447,130.687,53.902)
O5': (43.297,127.267,55.879)
O3': (44.213,126.935,52.263)
OP2: (44.430,127.630,58.068)
C3': (43.511,127.909,53.018)
C1': (41.875,129.601,53.108)
C5': (42.489,126.541,54.932)
O6: (44.341,134.634,55.252)
O4': (41.496,128.546,53.985)
C8: (42.904,130.607,55.200)
C2: (42.778,133.769,52.177)
C6: (43.748,133.934,54.428)
C5: (43.321,132.590,54.559)
C4: (42.684,131.981,53.491)
P: (43.458,126.752,57.380)
C4': (42.272,127.353,53.680)
C2': (42.915,129.010,52.156)
O2': (42.251,128.483,51.033)
N1: (43.425,134.455,53.176)
N2: (42.564,134.453,51.049)
N3: (42.376,132.506,52.282)
N7: (43.442,131.716,55.627)
N9: (42.447,130.687,53.902)
O5': (43.297,127.267,55.879)
O3': (44.213,126.935,52.263)
Image (generated by PyMOL):