ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4A:B27:B28

Extra

PDB:
ATOM 1 O3' U A 26 48.191 32.884 46.322 1.00 76.35 O
ATOM 2 P A A 27 47.235 33.991 47.006 1.00 73.09 P
ATOM 3 OP1 A A 27 47.142 35.176 46.113 1.00 73.30 O
ATOM 4 OP2 A A 27 47.748 34.160 48.386 1.00 73.69 O
ATOM 5 O5' A A 27 45.800 33.293 47.115 1.00 70.14 O
ATOM 6 C5' A A 27 44.719 33.707 46.274 1.00 64.23 C
ATOM 7 C4' A A 27 43.394 33.678 47.017 1.00 59.48 C
ATOM 8 O4' A A 27 42.968 32.311 47.249 1.00 57.91 O
ATOM 9 C3' A A 27 43.474 34.331 48.391 1.00 57.15 C
ATOM 10 O3' A A 27 42.365 35.209 48.576 1.00 54.55 O
ATOM 11 C2' A A 27 43.644 33.176 49.388 1.00 56.41 C
ATOM 12 O2' A A 27 42.903 33.320 50.581 1.00 56.76 O
ATOM 13 C1' A A 27 43.005 32.018 48.624 1.00 55.74 C
ATOM 14 N9 A A 27 43.494 30.659 48.822 1.00 53.90 N
ATOM 15 C8 A A 27 44.541 30.009 48.226 1.00 53.22 C
ATOM 16 N7 A A 27 44.656 28.753 48.592 1.00 52.83 N
ATOM 17 C5 A A 27 43.623 28.574 49.501 1.00 52.14 C
ATOM 18 C6 A A 27 43.199 27.465 50.250 1.00 52.48 C
ATOM 19 N6 A A 27 43.780 26.264 50.200 1.00 53.92 N
ATOM 20 N1 A A 27 42.137 27.630 51.066 1.00 52.15 N
ATOM 21 C2 A A 27 41.548 28.823 51.117 1.00 50.01 C
ATOM 22 N3 A A 27 41.850 29.934 50.463 1.00 51.89 N
ATOM 23 C4 A A 27 42.910 29.742 49.662 1.00 52.62 C
ATOM 24 P U A 28 42.566 36.666 49.209 1.00 51.99 P
ATOM 25 OP1 U A 28 42.727 37.640 48.095 1.00 52.46 O
ATOM 26 OP2 U A 28 43.606 36.573 50.262 1.00 52.33 O
ATOM 27 O5' U A 28 41.147 36.950 49.876 1.00 48.89 O
TER

ATOM 1 O3' A B 27 42.365 35.209 48.576 1.00 54.55 O
ATOM 2 P U B 28 42.566 36.666 49.209 1.00 51.99 P
ATOM 3 OP1 U B 28 42.727 37.640 48.095 1.00 52.46 O
ATOM 4 OP2 U B 28 43.606 36.573 50.262 1.00 52.33 O
ATOM 5 O5' U B 28 41.147 36.950 49.876 1.00 48.89 O
ATOM 6 C5' U B 28 39.994 37.113 49.061 1.00 44.63 C
ATOM 7 C4' U B 28 38.800 37.476 49.904 1.00 42.51 C
ATOM 8 O4' U B 28 38.487 36.376 50.799 1.00 41.61 O
ATOM 9 C3' U B 28 38.986 38.663 50.831 1.00 41.01 C
ATOM 10 O3' U B 28 38.740 39.877 50.150 1.00 41.40 O
ATOM 11 C2' U B 28 37.916 38.407 51.875 1.00 40.37 C
ATOM 12 O2' U B 28 36.628 38.742 51.411 1.00 39.91 O
ATOM 13 C1' U B 28 38.022 36.893 52.034 1.00 39.54 C
ATOM 14 N1 U B 28 38.979 36.518 53.085 1.00 36.35 N
ATOM 15 C2 U B 28 38.588 36.716 54.381 1.00 34.82 C
ATOM 16 O2 U B 28 37.512 37.206 54.668 1.00 37.77 O
ATOM 17 N3 U B 28 39.496 36.328 55.328 1.00 32.58 N
ATOM 18 C4 U B 28 40.738 35.780 55.103 1.00 33.44 C
ATOM 19 O4 U B 28 41.448 35.471 56.060 1.00 31.34 O
ATOM 20 C5 U B 28 41.077 35.623 53.726 1.00 32.34 C
ATOM 21 C6 U B 28 40.207 35.988 52.788 1.00 34.41 C
ATOM 22 P C B 29 39.529 41.201 50.592 1.00 41.94 P
ATOM 23 OP1 C B 29 39.208 42.300 49.644 1.00 42.24 O
ATOM 24 OP2 C B 29 40.944 40.804 50.814 1.00 41.49 O
ATOM 25 O5' C B 29 38.881 41.560 51.997 1.00 40.90 O
TER

Atoms:
OP1: (47.142,35.176,46.113)
OP2: (47.748,34.160,48.386)
C3': (43.474,34.331,48.391)
C1': (43.005,32.018,48.624)
C5': (44.719,33.707,46.274)
O4': (42.968,32.311,47.249)
C8: (44.541,30.009,48.226)
O2': (42.903,33.320,50.581)
C6: (43.199,27.465,50.250)
C5: (43.623,28.574,49.501)
C4: (42.910,29.742,49.662)
P: (47.235,33.991,47.006)
C4': (43.394,33.678,47.017)
C2': (43.644,33.176,49.388)
C2: (41.548,28.823,51.117)
N1: (42.137,27.630,51.066)
N3: (41.850,29.934,50.463)
N6: (43.780,26.264,50.200)
N7: (44.656,28.753,48.592)
N9: (43.494,30.659,48.822)
O5': (45.800,33.293,47.115)
O3': (42.365,35.209,48.576)
C4: (40.738,35.780,55.103)
N3: (39.496,36.328,55.328)
OP1: (42.727,37.640,48.095)
OP2: (43.606,36.573,50.262)
C2: (38.588,36.716,54.381)
C1': (38.022,36.893,52.034)
C3': (38.986,38.663,50.831)
O5': (41.147,36.950,49.876)
O4': (38.487,36.376,50.799)
C5': (39.994,37.113,49.061)
P: (42.566,36.666,49.209)
C4': (38.800,37.476,49.904)
C2': (37.916,38.407,51.875)
O2': (36.628,38.742,51.411)
N1: (38.979,36.518,53.085)
O4: (41.448,35.471,56.060)
O2: (37.512,37.206,54.668)
C6: (40.207,35.988,52.788)
C5: (41.077,35.623,53.726)
O3': (38.740,39.877,50.150)
Image (generated by PyMOL):
PyMOL image
show in jmol