ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4C:B27:B28

Extra

PDB:
ATOM 1 O3' U A 26 48.799 10.343 8.126 1.00 82.48 O
ATOM 2 P A A 27 47.774 11.472 8.671 1.00 76.79 P
ATOM 3 OP1 A A 27 47.832 12.662 7.783 1.00 77.19 O
ATOM 4 OP2 A A 27 48.079 11.628 10.110 1.00 77.09 O
ATOM 5 O5' A A 27 46.323 10.811 8.566 1.00 72.88 O
ATOM 6 C5' A A 27 45.290 11.420 7.782 1.00 65.98 C
ATOM 7 C4' A A 27 43.967 11.415 8.523 1.00 61.25 C
ATOM 8 O4' A A 27 43.498 10.057 8.714 1.00 60.40 O
ATOM 9 C3' A A 27 44.117 12.009 9.915 1.00 58.82 C
ATOM 10 O3' A A 27 43.068 12.915 10.223 1.00 54.81 O
ATOM 11 C2' A A 27 44.258 10.823 10.863 1.00 58.87 C
ATOM 12 O2' A A 27 43.555 11.030 12.064 1.00 59.00 O
ATOM 13 C1' A A 27 43.537 9.722 10.083 1.00 60.13 C
ATOM 14 N9 A A 27 44.006 8.351 10.244 1.00 60.70 N
ATOM 15 C8 A A 27 45.131 7.769 9.728 1.00 63.15 C
ATOM 16 N7 A A 27 45.275 6.509 10.065 1.00 64.26 N
ATOM 17 C5 A A 27 44.169 6.249 10.856 1.00 62.68 C
ATOM 18 C6 A A 27 43.751 5.100 11.528 1.00 63.65 C
ATOM 19 N6 A A 27 44.431 3.948 11.498 1.00 63.65 N
ATOM 20 N1 A A 27 42.601 5.169 12.238 1.00 62.75 N
ATOM 21 C2 A A 27 41.929 6.324 12.253 1.00 60.72 C
ATOM 22 N3 A A 27 42.225 7.474 11.659 1.00 61.02 N
ATOM 23 C4 A A 27 43.374 7.371 10.971 1.00 61.18 C
ATOM 24 P U A 28 43.368 14.474 10.395 1.00 52.34 P
ATOM 25 OP1 U A 28 43.707 15.070 9.076 1.00 52.70 O
ATOM 26 OP2 U A 28 44.306 14.628 11.542 1.00 52.00 O
ATOM 27 O5' U A 28 41.952 15.052 10.822 1.00 49.72 O
TER

ATOM 1 O3' A B 27 43.068 12.915 10.223 1.00 54.81 O
ATOM 2 P U B 28 43.368 14.474 10.395 1.00 52.34 P
ATOM 3 OP1 U B 28 43.707 15.070 9.076 1.00 52.70 O
ATOM 4 OP2 U B 28 44.306 14.628 11.542 1.00 52.00 O
ATOM 5 O5' U B 28 41.952 15.052 10.822 1.00 49.72 O
ATOM 6 C5' U B 28 40.827 14.976 9.956 1.00 43.76 C
ATOM 7 C4' U B 28 39.574 15.317 10.724 1.00 40.80 C
ATOM 8 O4' U B 28 39.230 14.218 11.604 1.00 38.91 O
ATOM 9 C3' U B 28 39.704 16.504 11.666 1.00 39.00 C
ATOM 10 O3' U B 28 39.517 17.736 11.001 1.00 39.05 O
ATOM 11 C2' U B 28 38.587 16.246 12.656 1.00 38.32 C
ATOM 12 O2' U B 28 37.320 16.619 12.167 1.00 38.49 O
ATOM 13 C1' U B 28 38.672 14.729 12.804 1.00 37.85 C
ATOM 14 N1 U B 28 39.529 14.349 13.937 1.00 35.92 N
ATOM 15 C2 U B 28 39.041 14.598 15.209 1.00 35.62 C
ATOM 16 O2 U B 28 37.933 15.085 15.406 1.00 38.17 O
ATOM 17 N3 U B 28 39.890 14.260 16.234 1.00 32.71 N
ATOM 18 C4 U B 28 41.147 13.710 16.119 1.00 32.05 C
ATOM 19 O4 U B 28 41.796 13.462 17.133 1.00 30.38 O
ATOM 20 C5 U B 28 41.571 13.471 14.778 1.00 32.31 C
ATOM 21 C6 U B 28 40.768 13.786 13.759 1.00 33.59 C
ATOM 22 P C B 29 40.191 19.059 11.592 1.00 39.65 P
ATOM 23 OP1 C B 29 39.850 20.185 10.693 1.00 40.32 O
ATOM 24 OP2 C B 29 41.608 18.753 11.886 1.00 39.65 O
ATOM 25 O5' C B 29 39.430 19.308 12.971 1.00 39.89 O
TER

Atoms:
OP1: (47.832,12.662,7.783)
OP2: (48.079,11.628,10.110)
C3': (44.117,12.009,9.915)
C1': (43.537,9.722,10.083)
C5': (45.290,11.420,7.782)
O4': (43.498,10.057,8.714)
C8: (45.131,7.769,9.728)
O2': (43.555,11.030,12.064)
C6: (43.751,5.100,11.528)
C5: (44.169,6.249,10.856)
C4: (43.374,7.371,10.971)
P: (47.774,11.472,8.671)
C4': (43.967,11.415,8.523)
C2': (44.258,10.823,10.863)
C2: (41.929,6.324,12.253)
N1: (42.601,5.169,12.238)
N3: (42.225,7.474,11.659)
N6: (44.431,3.948,11.498)
N7: (45.275,6.509,10.065)
N9: (44.006,8.351,10.244)
O5': (46.323,10.811,8.566)
O3': (43.068,12.915,10.223)
C4: (41.147,13.710,16.119)
N3: (39.890,14.260,16.234)
OP1: (43.707,15.070,9.076)
OP2: (44.306,14.628,11.542)
C2: (39.041,14.598,15.209)
C1': (38.672,14.729,12.804)
C3': (39.704,16.504,11.666)
O5': (41.952,15.052,10.822)
O4': (39.230,14.218,11.604)
C5': (40.827,14.976,9.956)
P: (43.368,14.474,10.395)
C4': (39.574,15.317,10.724)
C2': (38.587,16.246,12.656)
O2': (37.320,16.619,12.167)
N1: (39.529,14.349,13.937)
O4: (41.796,13.462,17.133)
O2: (37.933,15.085,15.406)
C6: (40.768,13.786,13.759)
C5: (41.571,13.471,14.778)
O3': (39.517,17.736,11.001)
Image (generated by PyMOL):
PyMOL image
show in jmol