ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0303:0324

Extra

PDB:
ATOM 1 O3' G A 302 6.323 147.859 53.166 1.00 49.03 O
ATOM 2 P G A 303 6.196 149.456 53.232 1.00 47.82 P
ATOM 3 OP1 G A 303 7.112 149.942 54.287 1.00 48.15 O
ATOM 4 OP2 G A 303 4.753 149.799 53.302 1.00 48.36 O
ATOM 5 O5' G A 303 6.768 149.929 51.825 1.00 47.42 O
ATOM 6 C5' G A 303 6.779 151.314 51.464 1.00 47.43 C
ATOM 7 C4' G A 303 8.073 151.652 50.778 1.00 48.38 C
ATOM 8 O4' G A 303 9.168 151.489 51.711 1.00 49.53 O
ATOM 9 C3' G A 303 8.436 150.743 49.618 1.00 50.04 C
ATOM 10 O3' G A 303 7.777 151.177 48.437 1.00 50.33 O
ATOM 11 C2' G A 303 9.949 150.906 49.537 1.00 50.69 C
ATOM 12 O2' G A 303 10.334 152.112 48.903 1.00 52.23 O
ATOM 13 C1' G A 303 10.316 151.019 51.019 1.00 50.19 C
ATOM 14 N9 G A 303 10.794 149.798 51.671 1.00 48.66 N
ATOM 15 C8 G A 303 10.224 149.158 52.746 1.00 48.75 C
ATOM 16 N7 G A 303 10.920 148.137 53.163 1.00 47.84 N
ATOM 17 C5 G A 303 12.007 148.087 52.305 1.00 47.99 C
ATOM 18 C6 G A 303 13.107 147.199 52.276 1.00 48.30 C
ATOM 19 O6 G A 303 13.359 146.261 53.044 1.00 47.98 O
ATOM 20 N1 G A 303 13.972 147.489 51.223 1.00 48.38 N
ATOM 21 C2 G A 303 13.804 148.511 50.319 1.00 47.19 C
ATOM 22 N2 G A 303 14.743 148.624 49.360 1.00 44.05 N
ATOM 23 N3 G A 303 12.788 149.360 50.350 1.00 47.56 N
ATOM 24 C4 G A 303 11.934 149.090 51.361 1.00 47.76 C
ATOM 25 P A A 304 6.775 150.189 47.671 1.00 49.67 P
ATOM 26 OP1 A A 304 5.809 151.043 46.949 1.00 51.96 O
ATOM 27 OP2 A A 304 6.274 149.170 48.628 1.00 50.10 O
ATOM 28 O5' A A 304 7.703 149.486 46.589 1.00 48.81 O
TER

ATOM 1 O3' U B 323 19.080 146.921 40.833 1.00 41.36 O
ATOM 2 P G B 324 17.711 147.333 41.576 1.00 42.79 P
ATOM 3 OP1 G B 324 16.649 146.312 41.341 1.00 43.83 O
ATOM 4 OP2 G B 324 17.443 148.744 41.254 1.00 43.60 O
ATOM 5 O5' G B 324 18.102 147.338 43.114 1.00 43.83 O
ATOM 6 C5' G B 324 18.067 146.134 43.875 1.00 43.00 C
ATOM 7 C4' G B 324 17.415 146.386 45.207 1.00 42.27 C
ATOM 8 O4' G B 324 16.981 147.773 45.312 1.00 40.68 O
ATOM 9 C3' G B 324 16.181 145.534 45.456 1.00 42.20 C
ATOM 10 O3' G B 324 16.130 145.220 46.844 1.00 41.55 O
ATOM 11 C2' G B 324 15.057 146.479 45.036 1.00 42.19 C
ATOM 12 O2' G B 324 13.789 146.165 45.569 1.00 42.18 O
ATOM 13 C1' G B 324 15.589 147.814 45.557 1.00 41.65 C
ATOM 14 N9 G B 324 15.043 149.004 44.908 1.00 41.92 N
ATOM 15 C8 G B 324 15.146 149.345 43.581 1.00 41.70 C
ATOM 16 N7 G B 324 14.578 150.486 43.298 1.00 41.16 N
ATOM 17 C5 G B 324 14.063 150.925 44.509 1.00 41.50 C
ATOM 18 C6 G B 324 13.346 152.108 44.826 1.00 41.34 C
ATOM 19 O6 G B 324 13.012 153.025 44.078 1.00 41.55 O
ATOM 20 N1 G B 324 13.014 152.163 46.172 1.00 41.27 N
ATOM 21 C2 G B 324 13.328 151.205 47.100 1.00 43.29 C
ATOM 22 N2 G B 324 12.919 151.451 48.353 1.00 42.52 N
ATOM 23 N3 G B 324 13.998 150.091 46.821 1.00 43.57 N
ATOM 24 C4 G B 324 14.333 150.020 45.514 1.00 42.37 C
ATOM 25 P A B 325 17.019 144.010 47.420 1.00 40.25 P
ATOM 26 OP1 A B 325 17.446 144.384 48.791 1.00 39.38 O
ATOM 27 OP2 A B 325 18.044 143.628 46.412 1.00 38.43 O
ATOM 28 O5' A B 325 15.981 142.816 47.562 1.00 41.74 O
TER

Atoms:
OP1: (7.112,149.942,54.287)
OP2: (4.753,149.799,53.302)
C3': (8.436,150.743,49.618)
C1': (10.316,151.019,51.019)
C5': (6.779,151.314,51.464)
O6: (13.359,146.261,53.044)
O4': (9.168,151.489,51.711)
C8: (10.224,149.158,52.746)
C2: (13.804,148.511,50.319)
C6: (13.107,147.199,52.276)
C5: (12.007,148.087,52.305)
C4: (11.934,149.090,51.361)
P: (6.196,149.456,53.232)
C4': (8.073,151.652,50.778)
C2': (9.949,150.906,49.537)
O2': (10.334,152.112,48.903)
N1: (13.972,147.489,51.223)
N2: (14.743,148.624,49.360)
N3: (12.788,149.360,50.350)
N7: (10.920,148.137,53.163)
N9: (10.794,149.798,51.671)
O5': (6.768,149.929,51.825)
O3': (7.777,151.177,48.437)
OP1: (16.649,146.312,41.341)
OP2: (17.443,148.744,41.254)
C3': (16.181,145.534,45.456)
C1': (15.589,147.814,45.557)
C5': (18.067,146.134,43.875)
O6: (13.012,153.025,44.078)
O4': (16.981,147.773,45.312)
C8: (15.146,149.345,43.581)
C2: (13.328,151.205,47.100)
C6: (13.346,152.108,44.826)
C5: (14.063,150.925,44.509)
C4: (14.333,150.020,45.514)
P: (17.711,147.333,41.576)
C4': (17.415,146.386,45.207)
C2': (15.057,146.479,45.036)
O2': (13.789,146.165,45.569)
N1: (13.014,152.163,46.172)
N2: (12.919,151.451,48.353)
N3: (13.998,150.091,46.821)
N7: (14.578,150.486,43.298)
N9: (15.043,149.004,44.908)
O5': (18.102,147.338,43.114)
O3': (16.130,145.220,46.844)
Image (generated by PyMOL):
PyMOL image
show in jmol