Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02025:02026
Extra
PDB:
ATOM 1 O3' U A2024 31.597 115.032 111.610 1.00 35.25 O
ATOM 2 P G A2025 30.780 116.213 112.328 1.00 37.56 P
ATOM 3 OP1 G A2025 29.418 115.662 112.509 1.00 36.90 O
ATOM 4 OP2 G A2025 30.967 117.498 111.604 1.00 34.35 O
ATOM 5 O5' G A2025 31.479 116.342 113.753 1.00 36.22 O
ATOM 6 C5' G A2025 31.607 115.196 114.615 1.00 35.26 C
ATOM 7 C4' G A2025 32.407 115.551 115.842 1.00 34.65 C
ATOM 8 O4' G A2025 33.818 115.691 115.532 1.00 34.06 O
ATOM 9 C3' G A2025 32.029 116.878 116.454 1.00 34.81 C
ATOM 10 O3' G A2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 11 C2' G A2025 33.272 117.222 117.259 1.00 33.11 C
ATOM 12 O2' G A2025 33.352 116.459 118.445 1.00 30.09 O
ATOM 13 C1' G A2025 34.375 116.741 116.312 1.00 33.38 C
ATOM 14 N9 G A2025 34.893 117.762 115.398 1.00 33.50 N
ATOM 15 C8 G A2025 34.432 118.037 114.132 1.00 32.79 C
ATOM 16 N7 G A2025 35.110 118.975 113.530 1.00 33.19 N
ATOM 17 C5 G A2025 36.076 119.353 114.452 1.00 33.72 C
ATOM 18 C6 G A2025 37.109 120.333 114.358 1.00 33.66 C
ATOM 19 O6 G A2025 37.378 121.079 113.416 1.00 34.29 O
ATOM 20 N1 G A2025 37.862 120.397 115.521 1.00 32.99 N
ATOM 21 C2 G A2025 37.654 119.629 116.637 1.00 32.37 C
ATOM 22 N2 G A2025 38.486 119.855 117.656 1.00 29.52 N
ATOM 23 N3 G A2025 36.698 118.710 116.743 1.00 32.24 N
ATOM 24 C4 G A2025 35.952 118.624 115.618 1.00 33.19 C
ATOM 25 P G A2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 26 OP1 G A2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 27 OP2 G A2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 28 O5' G A2026 30.833 118.548 118.906 1.00 37.85 O
TER
ATOM 1 O3' G B2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 2 P G B2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 3 OP1 G B2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 4 OP2 G B2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 5 O5' G B2026 30.833 118.548 118.906 1.00 37.85 O
ATOM 6 C5' G B2026 30.875 119.940 119.200 1.00 37.68 C
ATOM 7 C4' G B2026 32.186 120.297 119.843 1.00 37.53 C
ATOM 8 O4' G B2026 33.282 119.846 119.003 1.00 38.98 O
ATOM 9 C3' G B2026 32.403 121.791 119.965 1.00 38.43 C
ATOM 10 O3' G B2026 31.737 122.323 121.101 1.00 38.08 O
ATOM 11 C2' G B2026 33.918 121.893 120.015 1.00 38.61 C
ATOM 12 O2' G B2026 34.443 121.552 121.280 1.00 38.38 O
ATOM 13 C1' G B2026 34.313 120.821 118.995 1.00 38.48 C
ATOM 14 N9 G B2026 34.429 121.343 117.635 1.00 39.08 N
ATOM 15 C8 G B2026 33.616 121.051 116.567 1.00 39.26 C
ATOM 16 N7 G B2026 33.955 121.681 115.476 1.00 40.22 N
ATOM 17 C5 G B2026 35.062 122.434 115.843 1.00 40.92 C
ATOM 18 C6 G B2026 35.866 123.327 115.078 1.00 41.09 C
ATOM 19 O6 G B2026 35.748 123.648 113.889 1.00 40.05 O
ATOM 20 N1 G B2026 36.893 123.869 115.843 1.00 41.48 N
ATOM 21 C2 G B2026 37.120 123.596 117.170 1.00 40.75 C
ATOM 22 N2 G B2026 38.172 124.217 117.732 1.00 40.75 N
ATOM 23 N3 G B2026 36.376 122.776 117.894 1.00 39.87 N
ATOM 24 C4 G B2026 35.372 122.233 117.172 1.00 40.10 C
ATOM 25 P A B2027 30.989 123.739 120.992 1.00 37.18 P
ATOM 26 OP1 A B2027 30.156 123.881 122.205 1.00 39.77 O
ATOM 27 OP2 A B2027 30.356 123.863 119.656 1.00 39.22 O
ATOM 28 O5' A B2027 32.181 124.784 121.076 1.00 37.68 O
TER
ATOM 2 P G A2025 30.780 116.213 112.328 1.00 37.56 P
ATOM 3 OP1 G A2025 29.418 115.662 112.509 1.00 36.90 O
ATOM 4 OP2 G A2025 30.967 117.498 111.604 1.00 34.35 O
ATOM 5 O5' G A2025 31.479 116.342 113.753 1.00 36.22 O
ATOM 6 C5' G A2025 31.607 115.196 114.615 1.00 35.26 C
ATOM 7 C4' G A2025 32.407 115.551 115.842 1.00 34.65 C
ATOM 8 O4' G A2025 33.818 115.691 115.532 1.00 34.06 O
ATOM 9 C3' G A2025 32.029 116.878 116.454 1.00 34.81 C
ATOM 10 O3' G A2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 11 C2' G A2025 33.272 117.222 117.259 1.00 33.11 C
ATOM 12 O2' G A2025 33.352 116.459 118.445 1.00 30.09 O
ATOM 13 C1' G A2025 34.375 116.741 116.312 1.00 33.38 C
ATOM 14 N9 G A2025 34.893 117.762 115.398 1.00 33.50 N
ATOM 15 C8 G A2025 34.432 118.037 114.132 1.00 32.79 C
ATOM 16 N7 G A2025 35.110 118.975 113.530 1.00 33.19 N
ATOM 17 C5 G A2025 36.076 119.353 114.452 1.00 33.72 C
ATOM 18 C6 G A2025 37.109 120.333 114.358 1.00 33.66 C
ATOM 19 O6 G A2025 37.378 121.079 113.416 1.00 34.29 O
ATOM 20 N1 G A2025 37.862 120.397 115.521 1.00 32.99 N
ATOM 21 C2 G A2025 37.654 119.629 116.637 1.00 32.37 C
ATOM 22 N2 G A2025 38.486 119.855 117.656 1.00 29.52 N
ATOM 23 N3 G A2025 36.698 118.710 116.743 1.00 32.24 N
ATOM 24 C4 G A2025 35.952 118.624 115.618 1.00 33.19 C
ATOM 25 P G A2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 26 OP1 G A2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 27 OP2 G A2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 28 O5' G A2026 30.833 118.548 118.906 1.00 37.85 O
TER
ATOM 1 O3' G B2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 2 P G B2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 3 OP1 G B2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 4 OP2 G B2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 5 O5' G B2026 30.833 118.548 118.906 1.00 37.85 O
ATOM 6 C5' G B2026 30.875 119.940 119.200 1.00 37.68 C
ATOM 7 C4' G B2026 32.186 120.297 119.843 1.00 37.53 C
ATOM 8 O4' G B2026 33.282 119.846 119.003 1.00 38.98 O
ATOM 9 C3' G B2026 32.403 121.791 119.965 1.00 38.43 C
ATOM 10 O3' G B2026 31.737 122.323 121.101 1.00 38.08 O
ATOM 11 C2' G B2026 33.918 121.893 120.015 1.00 38.61 C
ATOM 12 O2' G B2026 34.443 121.552 121.280 1.00 38.38 O
ATOM 13 C1' G B2026 34.313 120.821 118.995 1.00 38.48 C
ATOM 14 N9 G B2026 34.429 121.343 117.635 1.00 39.08 N
ATOM 15 C8 G B2026 33.616 121.051 116.567 1.00 39.26 C
ATOM 16 N7 G B2026 33.955 121.681 115.476 1.00 40.22 N
ATOM 17 C5 G B2026 35.062 122.434 115.843 1.00 40.92 C
ATOM 18 C6 G B2026 35.866 123.327 115.078 1.00 41.09 C
ATOM 19 O6 G B2026 35.748 123.648 113.889 1.00 40.05 O
ATOM 20 N1 G B2026 36.893 123.869 115.843 1.00 41.48 N
ATOM 21 C2 G B2026 37.120 123.596 117.170 1.00 40.75 C
ATOM 22 N2 G B2026 38.172 124.217 117.732 1.00 40.75 N
ATOM 23 N3 G B2026 36.376 122.776 117.894 1.00 39.87 N
ATOM 24 C4 G B2026 35.372 122.233 117.172 1.00 40.10 C
ATOM 25 P A B2027 30.989 123.739 120.992 1.00 37.18 P
ATOM 26 OP1 A B2027 30.156 123.881 122.205 1.00 39.77 O
ATOM 27 OP2 A B2027 30.356 123.863 119.656 1.00 39.22 O
ATOM 28 O5' A B2027 32.181 124.784 121.076 1.00 37.68 O
TER
Atoms:
OP1: (29.418,115.662,112.509)
OP2: (30.967,117.498,111.604)
C3': (32.029,116.878,116.454)
C1': (34.375,116.741,116.312)
C5': (31.607,115.196,114.615)
O6: (37.378,121.079,113.416)
O4': (33.818,115.691,115.532)
C8: (34.432,118.037,114.132)
C2: (37.654,119.629,116.637)
C6: (37.109,120.333,114.358)
C5: (36.076,119.353,114.452)
C4: (35.952,118.624,115.618)
P: (30.780,116.213,112.328)
C4': (32.407,115.551,115.842)
C2': (33.272,117.222,117.259)
O2': (33.352,116.459,118.445)
N1: (37.862,120.397,115.521)
N2: (38.486,119.855,117.656)
N3: (36.698,118.710,116.743)
N7: (35.110,118.975,113.530)
N9: (34.893,117.762,115.398)
O5': (31.479,116.342,113.753)
O3': (30.854,116.717,117.218)
OP2: (30.967,117.498,111.604)
C3': (32.029,116.878,116.454)
C1': (34.375,116.741,116.312)
C5': (31.607,115.196,114.615)
O6: (37.378,121.079,113.416)
O4': (33.818,115.691,115.532)
C8: (34.432,118.037,114.132)
C2: (37.654,119.629,116.637)
C6: (37.109,120.333,114.358)
C5: (36.076,119.353,114.452)
C4: (35.952,118.624,115.618)
P: (30.780,116.213,112.328)
C4': (32.407,115.551,115.842)
C2': (33.272,117.222,117.259)
O2': (33.352,116.459,118.445)
N1: (37.862,120.397,115.521)
N2: (38.486,119.855,117.656)
N3: (36.698,118.710,116.743)
N7: (35.110,118.975,113.530)
N9: (34.893,117.762,115.398)
O5': (31.479,116.342,113.753)
O3': (30.854,116.717,117.218)
OP1: (28.705,117.455,118.122)
OP2: (30.028,119.044,116.594)
C3': (32.403,121.791,119.965)
C1': (34.313,120.821,118.995)
C5': (30.875,119.940,119.200)
O6: (35.748,123.648,113.889)
O4': (33.282,119.846,119.003)
C8: (33.616,121.051,116.567)
C2: (37.120,123.596,117.170)
C6: (35.866,123.327,115.078)
C5: (35.062,122.434,115.843)
C4: (35.372,122.233,117.172)
P: (30.009,118.003,117.659)
C4': (32.186,120.297,119.843)
C2': (33.918,121.893,120.015)
O2': (34.443,121.552,121.280)
N1: (36.893,123.869,115.843)
N2: (38.172,124.217,117.732)
N3: (36.376,122.776,117.894)
N7: (33.955,121.681,115.476)
N9: (34.429,121.343,117.635)
O5': (30.833,118.548,118.906)
O3': (31.737,122.323,121.101)
OP2: (30.028,119.044,116.594)
C3': (32.403,121.791,119.965)
C1': (34.313,120.821,118.995)
C5': (30.875,119.940,119.200)
O6: (35.748,123.648,113.889)
O4': (33.282,119.846,119.003)
C8: (33.616,121.051,116.567)
C2: (37.120,123.596,117.170)
C6: (35.866,123.327,115.078)
C5: (35.062,122.434,115.843)
C4: (35.372,122.233,117.172)
P: (30.009,118.003,117.659)
C4': (32.186,120.297,119.843)
C2': (33.918,121.893,120.015)
O2': (34.443,121.552,121.280)
N1: (36.893,123.869,115.843)
N2: (38.172,124.217,117.732)
N3: (36.376,122.776,117.894)
N7: (33.955,121.681,115.476)
N9: (34.429,121.343,117.635)
O5': (30.833,118.548,118.906)
O3': (31.737,122.323,121.101)
Image (generated by PyMOL):