Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A10:A29
Extra
PDB:
ATOM 1 O3' G A 9 -0.195 14.147 -53.938 1.00 32.49 O
ATOM 2 P G A 10 0.295 15.610 -53.535 1.00 33.29 P
ATOM 3 OP1 G A 10 -0.860 16.431 -53.100 1.00 33.05 O
ATOM 4 OP2 G A 10 1.195 16.053 -54.619 1.00 32.80 O
ATOM 5 O5' G A 10 1.154 15.316 -52.225 1.00 30.44 O
ATOM 6 C5' G A 10 0.454 15.093 -51.028 1.00 29.82 C
ATOM 7 C4' G A 10 1.430 14.666 -49.967 1.00 29.87 C
ATOM 8 O4' G A 10 2.262 13.609 -50.481 1.00 29.91 O
ATOM 9 C3' G A 10 2.421 15.731 -49.524 1.00 30.08 C
ATOM 10 O3' G A 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 11 C2' G A 10 3.496 14.840 -48.926 1.00 28.48 C
ATOM 12 O2' G A 10 3.092 14.307 -47.682 1.00 26.20 O
ATOM 13 C1' G A 10 3.568 13.732 -49.964 1.00 28.32 C
ATOM 14 N9 G A 10 4.434 13.919 -51.120 1.00 28.33 N
ATOM 15 C8 G A 10 4.114 14.587 -52.268 1.00 28.52 C
ATOM 16 N7 G A 10 5.072 14.559 -53.137 1.00 29.55 N
ATOM 17 C5 G A 10 6.082 13.836 -52.531 1.00 29.35 C
ATOM 18 C6 G A 10 7.369 13.496 -52.997 1.00 30.59 C
ATOM 19 O6 G A 10 7.883 13.768 -54.076 1.00 32.03 O
ATOM 20 N1 G A 10 8.111 12.748 -52.102 1.00 29.95 N
ATOM 21 C2 G A 10 7.648 12.368 -50.873 1.00 29.11 C
ATOM 22 N2 G A 10 8.509 11.642 -50.148 1.00 29.07 N
ATOM 23 N3 G A 10 6.439 12.684 -50.404 1.00 28.30 N
ATOM 24 C4 G A 10 5.708 13.422 -51.285 1.00 28.36 C
ATOM 25 P U A 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 26 OP1 U A 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 27 OP2 U A 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 28 O5' U A 11 3.627 18.150 -48.092 1.00 32.06 O
TER
ATOM 1 O3' A B 28 12.900 6.198 -45.104 1.00 33.56 O
ATOM 2 P G B 29 13.028 7.586 -44.336 1.00 31.99 P
ATOM 3 OP1 G B 29 14.462 7.913 -44.234 1.00 33.02 O
ATOM 4 OP2 G B 29 12.224 7.593 -43.084 1.00 31.24 O
ATOM 5 O5' G B 29 12.328 8.474 -45.441 1.00 29.34 O
ATOM 6 C5' G B 29 13.164 9.022 -46.400 1.00 31.14 C
ATOM 7 C4' G B 29 12.349 9.683 -47.473 1.00 31.16 C
ATOM 8 O4' G B 29 11.249 8.827 -47.821 1.00 30.97 O
ATOM 9 C3' G B 29 11.720 10.986 -47.058 1.00 31.06 C
ATOM 10 O3' G B 29 12.624 12.045 -47.267 1.00 32.88 O
ATOM 11 C2' G B 29 10.558 11.035 -48.029 1.00 30.98 C
ATOM 12 O2' G B 29 10.931 11.368 -49.353 1.00 31.65 O
ATOM 13 C1' G B 29 10.083 9.599 -48.003 1.00 30.60 C
ATOM 14 N9 G B 29 9.116 9.272 -46.958 1.00 29.33 N
ATOM 15 C8 G B 29 9.352 8.657 -45.764 1.00 29.33 C
ATOM 16 N7 G B 29 8.279 8.503 -45.057 1.00 28.40 N
ATOM 17 C5 G B 29 7.266 9.039 -45.823 1.00 27.70 C
ATOM 18 C6 G B 29 5.866 9.152 -45.566 1.00 28.62 C
ATOM 19 O6 G B 29 5.293 8.746 -44.540 1.00 27.99 O
ATOM 20 N1 G B 29 5.180 9.811 -46.666 1.00 28.34 N
ATOM 21 C2 G B 29 5.860 10.215 -47.766 1.00 27.90 C
ATOM 22 N2 G B 29 5.060 10.788 -48.661 1.00 28.27 N
ATOM 23 N3 G B 29 7.140 10.114 -48.009 1.00 27.69 N
ATOM 24 C4 G B 29 7.776 9.513 -46.995 1.00 27.52 C
ATOM 25 P A B 30 13.299 12.849 -46.059 1.00 35.01 P
ATOM 26 OP1 A B 30 14.521 13.436 -46.666 1.00 36.05 O
ATOM 27 OP2 A B 30 13.361 12.052 -44.821 1.00 32.74 O
ATOM 28 O5' A B 30 12.253 14.012 -45.777 1.00 34.17 O
TER
ATOM 2 P G A 10 0.295 15.610 -53.535 1.00 33.29 P
ATOM 3 OP1 G A 10 -0.860 16.431 -53.100 1.00 33.05 O
ATOM 4 OP2 G A 10 1.195 16.053 -54.619 1.00 32.80 O
ATOM 5 O5' G A 10 1.154 15.316 -52.225 1.00 30.44 O
ATOM 6 C5' G A 10 0.454 15.093 -51.028 1.00 29.82 C
ATOM 7 C4' G A 10 1.430 14.666 -49.967 1.00 29.87 C
ATOM 8 O4' G A 10 2.262 13.609 -50.481 1.00 29.91 O
ATOM 9 C3' G A 10 2.421 15.731 -49.524 1.00 30.08 C
ATOM 10 O3' G A 10 1.798 16.580 -48.567 1.00 31.79 O
ATOM 11 C2' G A 10 3.496 14.840 -48.926 1.00 28.48 C
ATOM 12 O2' G A 10 3.092 14.307 -47.682 1.00 26.20 O
ATOM 13 C1' G A 10 3.568 13.732 -49.964 1.00 28.32 C
ATOM 14 N9 G A 10 4.434 13.919 -51.120 1.00 28.33 N
ATOM 15 C8 G A 10 4.114 14.587 -52.268 1.00 28.52 C
ATOM 16 N7 G A 10 5.072 14.559 -53.137 1.00 29.55 N
ATOM 17 C5 G A 10 6.082 13.836 -52.531 1.00 29.35 C
ATOM 18 C6 G A 10 7.369 13.496 -52.997 1.00 30.59 C
ATOM 19 O6 G A 10 7.883 13.768 -54.076 1.00 32.03 O
ATOM 20 N1 G A 10 8.111 12.748 -52.102 1.00 29.95 N
ATOM 21 C2 G A 10 7.648 12.368 -50.873 1.00 29.11 C
ATOM 22 N2 G A 10 8.509 11.642 -50.148 1.00 29.07 N
ATOM 23 N3 G A 10 6.439 12.684 -50.404 1.00 28.30 N
ATOM 24 C4 G A 10 5.708 13.422 -51.285 1.00 28.36 C
ATOM 25 P U A 11 2.084 18.137 -48.454 1.00 32.30 P
ATOM 26 OP1 U A 11 1.401 18.601 -47.233 1.00 33.02 O
ATOM 27 OP2 U A 11 1.826 18.769 -49.763 1.00 32.71 O
ATOM 28 O5' U A 11 3.627 18.150 -48.092 1.00 32.06 O
TER
ATOM 1 O3' A B 28 12.900 6.198 -45.104 1.00 33.56 O
ATOM 2 P G B 29 13.028 7.586 -44.336 1.00 31.99 P
ATOM 3 OP1 G B 29 14.462 7.913 -44.234 1.00 33.02 O
ATOM 4 OP2 G B 29 12.224 7.593 -43.084 1.00 31.24 O
ATOM 5 O5' G B 29 12.328 8.474 -45.441 1.00 29.34 O
ATOM 6 C5' G B 29 13.164 9.022 -46.400 1.00 31.14 C
ATOM 7 C4' G B 29 12.349 9.683 -47.473 1.00 31.16 C
ATOM 8 O4' G B 29 11.249 8.827 -47.821 1.00 30.97 O
ATOM 9 C3' G B 29 11.720 10.986 -47.058 1.00 31.06 C
ATOM 10 O3' G B 29 12.624 12.045 -47.267 1.00 32.88 O
ATOM 11 C2' G B 29 10.558 11.035 -48.029 1.00 30.98 C
ATOM 12 O2' G B 29 10.931 11.368 -49.353 1.00 31.65 O
ATOM 13 C1' G B 29 10.083 9.599 -48.003 1.00 30.60 C
ATOM 14 N9 G B 29 9.116 9.272 -46.958 1.00 29.33 N
ATOM 15 C8 G B 29 9.352 8.657 -45.764 1.00 29.33 C
ATOM 16 N7 G B 29 8.279 8.503 -45.057 1.00 28.40 N
ATOM 17 C5 G B 29 7.266 9.039 -45.823 1.00 27.70 C
ATOM 18 C6 G B 29 5.866 9.152 -45.566 1.00 28.62 C
ATOM 19 O6 G B 29 5.293 8.746 -44.540 1.00 27.99 O
ATOM 20 N1 G B 29 5.180 9.811 -46.666 1.00 28.34 N
ATOM 21 C2 G B 29 5.860 10.215 -47.766 1.00 27.90 C
ATOM 22 N2 G B 29 5.060 10.788 -48.661 1.00 28.27 N
ATOM 23 N3 G B 29 7.140 10.114 -48.009 1.00 27.69 N
ATOM 24 C4 G B 29 7.776 9.513 -46.995 1.00 27.52 C
ATOM 25 P A B 30 13.299 12.849 -46.059 1.00 35.01 P
ATOM 26 OP1 A B 30 14.521 13.436 -46.666 1.00 36.05 O
ATOM 27 OP2 A B 30 13.361 12.052 -44.821 1.00 32.74 O
ATOM 28 O5' A B 30 12.253 14.012 -45.777 1.00 34.17 O
TER
Atoms:
OP1: (-0.860,16.431,-53.100)
OP2: (1.195,16.053,-54.619)
C3': (2.421,15.731,-49.524)
C1': (3.568,13.732,-49.964)
C5': (0.454,15.093,-51.028)
O6: (7.883,13.768,-54.076)
O4': (2.262,13.609,-50.481)
C8: (4.114,14.587,-52.268)
C2: (7.648,12.368,-50.873)
C6: (7.369,13.496,-52.997)
C5: (6.082,13.836,-52.531)
C4: (5.708,13.422,-51.285)
P: (0.295,15.610,-53.535)
C4': (1.430,14.666,-49.967)
C2': (3.496,14.840,-48.926)
O2': (3.092,14.307,-47.682)
N1: (8.111,12.748,-52.102)
N2: (8.509,11.642,-50.148)
N3: (6.439,12.684,-50.404)
N7: (5.072,14.559,-53.137)
N9: (4.434,13.919,-51.120)
O5': (1.154,15.316,-52.225)
O3': (1.798,16.580,-48.567)
OP2: (1.195,16.053,-54.619)
C3': (2.421,15.731,-49.524)
C1': (3.568,13.732,-49.964)
C5': (0.454,15.093,-51.028)
O6: (7.883,13.768,-54.076)
O4': (2.262,13.609,-50.481)
C8: (4.114,14.587,-52.268)
C2: (7.648,12.368,-50.873)
C6: (7.369,13.496,-52.997)
C5: (6.082,13.836,-52.531)
C4: (5.708,13.422,-51.285)
P: (0.295,15.610,-53.535)
C4': (1.430,14.666,-49.967)
C2': (3.496,14.840,-48.926)
O2': (3.092,14.307,-47.682)
N1: (8.111,12.748,-52.102)
N2: (8.509,11.642,-50.148)
N3: (6.439,12.684,-50.404)
N7: (5.072,14.559,-53.137)
N9: (4.434,13.919,-51.120)
O5': (1.154,15.316,-52.225)
O3': (1.798,16.580,-48.567)
OP1: (14.462,7.913,-44.234)
OP2: (12.224,7.593,-43.084)
C3': (11.720,10.986,-47.058)
C1': (10.083,9.599,-48.003)
C5': (13.164,9.022,-46.400)
O6: (5.293,8.746,-44.540)
O4': (11.249,8.827,-47.821)
C8: (9.352,8.657,-45.764)
C2: (5.860,10.215,-47.766)
C6: (5.866,9.152,-45.566)
C5: (7.266,9.039,-45.823)
C4: (7.776,9.513,-46.995)
P: (13.028,7.586,-44.336)
C4': (12.349,9.683,-47.473)
C2': (10.558,11.035,-48.029)
O2': (10.931,11.368,-49.353)
N1: (5.180,9.811,-46.666)
N2: (5.060,10.788,-48.661)
N3: (7.140,10.114,-48.009)
N7: (8.279,8.503,-45.057)
N9: (9.116,9.272,-46.958)
O5': (12.328,8.474,-45.441)
O3': (12.624,12.045,-47.267)
OP2: (12.224,7.593,-43.084)
C3': (11.720,10.986,-47.058)
C1': (10.083,9.599,-48.003)
C5': (13.164,9.022,-46.400)
O6: (5.293,8.746,-44.540)
O4': (11.249,8.827,-47.821)
C8: (9.352,8.657,-45.764)
C2: (5.860,10.215,-47.766)
C6: (5.866,9.152,-45.566)
C5: (7.266,9.039,-45.823)
C4: (7.776,9.513,-46.995)
P: (13.028,7.586,-44.336)
C4': (12.349,9.683,-47.473)
C2': (10.558,11.035,-48.029)
O2': (10.931,11.368,-49.353)
N1: (5.180,9.811,-46.666)
N2: (5.060,10.788,-48.661)
N3: (7.140,10.114,-48.009)
N7: (8.279,8.503,-45.057)
N9: (9.116,9.272,-46.958)
O5': (12.328,8.474,-45.441)
O3': (12.624,12.045,-47.267)
Image (generated by PyMOL):