Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:S41:S42
Extra
PDB:
ATOM 1 O3' U A 40 -4.284 -20.015 96.679 1.00 70.23 O
ATOM 2 P A A 41 -4.945 -20.496 95.303 1.00 69.60 P
ATOM 3 OP1 A A 41 -6.013 -21.464 95.644 1.00 69.52 O
ATOM 4 OP2 A A 41 -3.867 -20.896 94.369 1.00 69.63 O
ATOM 5 O5' A A 41 -5.627 -19.157 94.752 1.00 68.96 O
ATOM 6 C5' A A 41 -6.797 -18.630 95.373 1.00 67.56 C
ATOM 7 C4' A A 41 -7.861 -18.332 94.333 1.00 66.46 C
ATOM 8 O4' A A 41 -7.266 -17.573 93.253 1.00 66.19 O
ATOM 9 C3' A A 41 -8.518 -19.553 93.692 1.00 65.84 C
ATOM 10 O3' A A 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 11 C2' A A 41 -7.969 -19.552 92.260 1.00 65.64 C
ATOM 12 O2' A A 41 -8.883 -20.073 91.316 1.00 65.53 O
ATOM 13 C1' A A 41 -7.755 -18.062 92.022 1.00 65.60 C
ATOM 14 N9 A A 41 -6.790 -17.714 90.979 1.00 65.00 N
ATOM 15 C8 A A 41 -5.452 -17.480 91.148 1.00 64.79 C
ATOM 16 N7 A A 41 -4.818 -17.177 90.042 1.00 64.63 N
ATOM 17 C5 A A 41 -5.807 -17.210 89.075 1.00 64.35 C
ATOM 18 C6 A A 41 -5.779 -16.977 87.683 1.00 64.19 C
ATOM 19 N6 A A 41 -4.665 -16.655 87.016 1.00 64.03 N
ATOM 20 N1 A A 41 -6.942 -17.092 87.004 1.00 64.23 N
ATOM 21 C2 A A 41 -8.058 -17.419 87.676 1.00 64.41 C
ATOM 22 N3 A A 41 -8.208 -17.656 88.983 1.00 64.28 N
ATOM 23 C4 A A 41 -7.034 -17.536 89.634 1.00 64.55 C
ATOM 24 P U A 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 25 OP1 U A 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 26 OP2 U A 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 27 O5' U A 42 -12.281 -19.413 94.609 1.00 65.13 O
TER
ATOM 1 O3' A B 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 2 P U B 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 3 OP1 U B 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 4 OP2 U B 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 5 O5' U B 42 -12.281 -19.413 94.609 1.00 65.13 O
ATOM 6 C5' U B 42 -12.554 -18.008 94.517 1.00 65.06 C
ATOM 7 C4' U B 42 -14.016 -17.712 94.205 1.00 64.74 C
ATOM 8 O4' U B 42 -14.225 -17.672 92.768 1.00 65.11 O
ATOM 9 C3' U B 42 -15.016 -18.736 94.719 1.00 64.29 C
ATOM 10 O3' U B 42 -15.389 -18.415 96.056 1.00 63.23 O
ATOM 11 C2' U B 42 -16.160 -18.617 93.714 1.00 64.65 C
ATOM 12 O2' U B 42 -17.038 -17.541 93.973 1.00 64.89 O
ATOM 13 C1' U B 42 -15.405 -18.372 92.412 1.00 65.26 C
ATOM 14 N1 U B 42 -15.047 -19.625 91.645 1.00 66.24 N
ATOM 15 C2 U B 42 -16.040 -20.435 91.101 1.00 66.68 C
ATOM 16 O2 U B 42 -17.238 -20.221 91.193 1.00 66.77 O
ATOM 17 N3 U B 42 -15.579 -21.543 90.426 1.00 67.05 N
ATOM 18 C4 U B 42 -14.258 -21.919 90.238 1.00 67.30 C
ATOM 19 O4 U B 42 -14.000 -22.940 89.609 1.00 67.80 O
ATOM 20 C5 U B 42 -13.283 -21.033 90.825 1.00 67.13 C
ATOM 21 C6 U B 42 -13.707 -19.949 91.487 1.00 66.65 C
ATOM 22 P C B 43 -16.112 -19.505 96.976 1.00 62.11 P
ATOM 23 OP1 C B 43 -16.090 -19.032 98.378 1.00 62.05 O
ATOM 24 OP2 C B 43 -15.562 -20.839 96.648 1.00 62.21 O
ATOM 25 O5' C B 43 -17.603 -19.394 96.417 1.00 61.61 O
TER
ATOM 2 P A A 41 -4.945 -20.496 95.303 1.00 69.60 P
ATOM 3 OP1 A A 41 -6.013 -21.464 95.644 1.00 69.52 O
ATOM 4 OP2 A A 41 -3.867 -20.896 94.369 1.00 69.63 O
ATOM 5 O5' A A 41 -5.627 -19.157 94.752 1.00 68.96 O
ATOM 6 C5' A A 41 -6.797 -18.630 95.373 1.00 67.56 C
ATOM 7 C4' A A 41 -7.861 -18.332 94.333 1.00 66.46 C
ATOM 8 O4' A A 41 -7.266 -17.573 93.253 1.00 66.19 O
ATOM 9 C3' A A 41 -8.518 -19.553 93.692 1.00 65.84 C
ATOM 10 O3' A A 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 11 C2' A A 41 -7.969 -19.552 92.260 1.00 65.64 C
ATOM 12 O2' A A 41 -8.883 -20.073 91.316 1.00 65.53 O
ATOM 13 C1' A A 41 -7.755 -18.062 92.022 1.00 65.60 C
ATOM 14 N9 A A 41 -6.790 -17.714 90.979 1.00 65.00 N
ATOM 15 C8 A A 41 -5.452 -17.480 91.148 1.00 64.79 C
ATOM 16 N7 A A 41 -4.818 -17.177 90.042 1.00 64.63 N
ATOM 17 C5 A A 41 -5.807 -17.210 89.075 1.00 64.35 C
ATOM 18 C6 A A 41 -5.779 -16.977 87.683 1.00 64.19 C
ATOM 19 N6 A A 41 -4.665 -16.655 87.016 1.00 64.03 N
ATOM 20 N1 A A 41 -6.942 -17.092 87.004 1.00 64.23 N
ATOM 21 C2 A A 41 -8.058 -17.419 87.676 1.00 64.41 C
ATOM 22 N3 A A 41 -8.208 -17.656 88.983 1.00 64.28 N
ATOM 23 C4 A A 41 -7.034 -17.536 89.634 1.00 64.55 C
ATOM 24 P U A 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 25 OP1 U A 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 26 OP2 U A 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 27 O5' U A 42 -12.281 -19.413 94.609 1.00 65.13 O
TER
ATOM 1 O3' A B 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 2 P U B 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 3 OP1 U B 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 4 OP2 U B 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 5 O5' U B 42 -12.281 -19.413 94.609 1.00 65.13 O
ATOM 6 C5' U B 42 -12.554 -18.008 94.517 1.00 65.06 C
ATOM 7 C4' U B 42 -14.016 -17.712 94.205 1.00 64.74 C
ATOM 8 O4' U B 42 -14.225 -17.672 92.768 1.00 65.11 O
ATOM 9 C3' U B 42 -15.016 -18.736 94.719 1.00 64.29 C
ATOM 10 O3' U B 42 -15.389 -18.415 96.056 1.00 63.23 O
ATOM 11 C2' U B 42 -16.160 -18.617 93.714 1.00 64.65 C
ATOM 12 O2' U B 42 -17.038 -17.541 93.973 1.00 64.89 O
ATOM 13 C1' U B 42 -15.405 -18.372 92.412 1.00 65.26 C
ATOM 14 N1 U B 42 -15.047 -19.625 91.645 1.00 66.24 N
ATOM 15 C2 U B 42 -16.040 -20.435 91.101 1.00 66.68 C
ATOM 16 O2 U B 42 -17.238 -20.221 91.193 1.00 66.77 O
ATOM 17 N3 U B 42 -15.579 -21.543 90.426 1.00 67.05 N
ATOM 18 C4 U B 42 -14.258 -21.919 90.238 1.00 67.30 C
ATOM 19 O4 U B 42 -14.000 -22.940 89.609 1.00 67.80 O
ATOM 20 C5 U B 42 -13.283 -21.033 90.825 1.00 67.13 C
ATOM 21 C6 U B 42 -13.707 -19.949 91.487 1.00 66.65 C
ATOM 22 P C B 43 -16.112 -19.505 96.976 1.00 62.11 P
ATOM 23 OP1 C B 43 -16.090 -19.032 98.378 1.00 62.05 O
ATOM 24 OP2 C B 43 -15.562 -20.839 96.648 1.00 62.21 O
ATOM 25 O5' C B 43 -17.603 -19.394 96.417 1.00 61.61 O
TER
Atoms:
OP1: (-6.013,-21.464,95.644)
OP2: (-3.867,-20.896,94.369)
C3': (-8.518,-19.553,93.692)
C1': (-7.755,-18.062,92.022)
C5': (-6.797,-18.630,95.373)
O4': (-7.266,-17.573,93.253)
C8: (-5.452,-17.480,91.148)
O2': (-8.883,-20.073,91.316)
C6: (-5.779,-16.977,87.683)
C5: (-5.807,-17.210,89.075)
C4: (-7.034,-17.536,89.634)
P: (-4.945,-20.496,95.303)
C4': (-7.861,-18.332,94.333)
C2': (-7.969,-19.552,92.260)
C2: (-8.058,-17.419,87.676)
N1: (-6.942,-17.092,87.004)
N3: (-8.208,-17.656,88.983)
N6: (-4.665,-16.655,87.016)
N7: (-4.818,-17.177,90.042)
N9: (-6.790,-17.714,90.979)
O5': (-5.627,-19.157,94.752)
O3': (-9.939,-19.402,93.734)
OP2: (-3.867,-20.896,94.369)
C3': (-8.518,-19.553,93.692)
C1': (-7.755,-18.062,92.022)
C5': (-6.797,-18.630,95.373)
O4': (-7.266,-17.573,93.253)
C8: (-5.452,-17.480,91.148)
O2': (-8.883,-20.073,91.316)
C6: (-5.779,-16.977,87.683)
C5: (-5.807,-17.210,89.075)
C4: (-7.034,-17.536,89.634)
P: (-4.945,-20.496,95.303)
C4': (-7.861,-18.332,94.333)
C2': (-7.969,-19.552,92.260)
C2: (-8.058,-17.419,87.676)
N1: (-6.942,-17.092,87.004)
N3: (-8.208,-17.656,88.983)
N6: (-4.665,-16.655,87.016)
N7: (-4.818,-17.177,90.042)
N9: (-6.790,-17.714,90.979)
O5': (-5.627,-19.157,94.752)
O3': (-9.939,-19.402,93.734)
C4: (-14.258,-21.919,90.238)
N3: (-15.579,-21.543,90.426)
OP1: (-10.384,-19.283,96.215)
OP2: (-10.803,-21.426,94.887)
C2: (-16.040,-20.435,91.101)
C1': (-15.405,-18.372,92.412)
C3': (-15.016,-18.736,94.719)
O5': (-12.281,-19.413,94.609)
O4': (-14.225,-17.672,92.768)
C5': (-12.554,-18.008,94.517)
P: (-10.813,-19.948,94.964)
C4': (-14.016,-17.712,94.205)
C2': (-16.160,-18.617,93.714)
O2': (-17.038,-17.541,93.973)
N1: (-15.047,-19.625,91.645)
O4: (-14.000,-22.940,89.609)
O2: (-17.238,-20.221,91.193)
C6: (-13.707,-19.949,91.487)
C5: (-13.283,-21.033,90.825)
O3': (-15.389,-18.415,96.056)
N3: (-15.579,-21.543,90.426)
OP1: (-10.384,-19.283,96.215)
OP2: (-10.803,-21.426,94.887)
C2: (-16.040,-20.435,91.101)
C1': (-15.405,-18.372,92.412)
C3': (-15.016,-18.736,94.719)
O5': (-12.281,-19.413,94.609)
O4': (-14.225,-17.672,92.768)
C5': (-12.554,-18.008,94.517)
P: (-10.813,-19.948,94.964)
C4': (-14.016,-17.712,94.205)
C2': (-16.160,-18.617,93.714)
O2': (-17.038,-17.541,93.973)
N1: (-15.047,-19.625,91.645)
O4: (-14.000,-22.940,89.609)
O2: (-17.238,-20.221,91.193)
C6: (-13.707,-19.949,91.487)
C5: (-13.283,-21.033,90.825)
O3': (-15.389,-18.415,96.056)
Image (generated by PyMOL):