Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y9:Y32
Extra
PDB:
ATOM 1 O3' G A 8 16.300 2.247 58.567 1.00 34.45 O
ATOM 2 P G A 9 15.244 1.899 57.413 1.00 34.30 P
ATOM 3 OP1 G A 9 13.894 1.918 58.019 1.00 34.13 O
ATOM 4 OP2 G A 9 15.722 0.705 56.680 1.00 34.26 O
ATOM 5 O5' G A 9 15.363 3.157 56.439 1.00 33.40 O
ATOM 6 C5' G A 9 14.916 4.426 56.882 1.00 32.99 C
ATOM 7 C4' G A 9 15.282 5.486 55.862 1.00 32.49 C
ATOM 8 O4' G A 9 16.725 5.590 55.766 1.00 32.74 O
ATOM 9 C3' G A 9 14.826 5.179 54.446 1.00 32.85 C
ATOM 10 O3' G A 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 11 C2' G A 9 15.812 6.006 53.630 1.00 32.62 C
ATOM 12 O2' G A 9 15.449 7.374 53.621 1.00 32.54 O
ATOM 13 C1' G A 9 17.103 5.813 54.421 1.00 32.13 C
ATOM 14 N9 G A 9 17.944 4.691 54.000 1.00 31.64 N
ATOM 15 C8 G A 9 17.759 3.357 54.282 1.00 31.52 C
ATOM 16 N7 G A 9 18.691 2.586 53.789 1.00 31.69 N
ATOM 17 C5 G A 9 19.552 3.465 53.145 1.00 31.07 C
ATOM 18 C6 G A 9 20.743 3.212 52.423 1.00 31.20 C
ATOM 19 O6 G A 9 21.291 2.123 52.202 1.00 31.45 O
ATOM 20 N1 G A 9 21.307 4.385 51.927 1.00 30.57 N
ATOM 21 C2 G A 9 20.787 5.644 52.107 1.00 30.77 C
ATOM 22 N2 G A 9 21.473 6.658 51.558 1.00 30.93 N
ATOM 23 N3 G A 9 19.673 5.895 52.780 1.00 30.59 N
ATOM 24 C4 G A 9 19.108 4.762 53.267 1.00 31.05 C
ATOM 25 P U A 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 26 OP1 U A 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 27 OP2 U A 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 28 O5' U A 10 12.988 5.099 51.860 1.00 34.28 O
TER
ATOM 1 O3' A B 31 25.195 14.447 48.988 1.00 31.83 O
ATOM 2 P G B 32 23.972 14.507 47.958 1.00 32.12 P
ATOM 3 OP1 G B 32 24.526 14.805 46.619 1.00 32.24 O
ATOM 4 OP2 G B 32 22.929 15.381 48.542 1.00 32.71 O
ATOM 5 O5' G B 32 23.424 13.006 47.958 1.00 31.36 O
ATOM 6 C5' G B 32 24.276 11.939 47.556 1.00 31.03 C
ATOM 7 C4' G B 32 23.782 10.626 48.130 1.00 30.45 C
ATOM 8 O4' G B 32 23.816 10.692 49.578 1.00 30.20 O
ATOM 9 C3' G B 32 22.340 10.292 47.784 1.00 30.38 C
ATOM 10 O3' G B 32 22.302 9.589 46.549 1.00 31.27 O
ATOM 11 C2' G B 32 21.922 9.412 48.960 1.00 29.97 C
ATOM 12 O2' G B 32 22.356 8.075 48.816 1.00 29.50 O
ATOM 13 C1' G B 32 22.674 10.056 50.121 1.00 29.45 C
ATOM 14 N9 G B 32 21.927 11.043 50.897 1.00 28.83 N
ATOM 15 C8 G B 32 21.955 12.408 50.744 1.00 28.50 C
ATOM 16 N7 G B 32 21.205 13.043 51.600 1.00 28.44 N
ATOM 17 C5 G B 32 20.650 12.037 52.379 1.00 28.33 C
ATOM 18 C6 G B 32 19.755 12.118 53.472 1.00 28.50 C
ATOM 19 O6 G B 32 19.257 13.130 53.984 1.00 29.10 O
ATOM 20 N1 G B 32 19.443 10.858 53.977 1.00 28.35 N
ATOM 21 C2 G B 32 19.935 9.670 53.491 1.00 27.81 C
ATOM 22 N2 G B 32 19.523 8.554 54.110 1.00 27.79 N
ATOM 23 N3 G B 32 20.772 9.582 52.467 1.00 27.93 N
ATOM 24 C4 G B 32 21.087 10.800 51.962 1.00 28.34 C
ATOM 25 P A B 33 21.172 9.907 45.462 1.00 31.52 P
ATOM 26 OP1 A B 33 21.362 8.958 44.342 1.00 30.72 O
ATOM 27 OP2 A B 33 21.169 11.364 45.203 1.00 31.47 O
ATOM 28 O5' A B 33 19.817 9.555 46.239 1.00 31.25 O
TER
ATOM 2 P G A 9 15.244 1.899 57.413 1.00 34.30 P
ATOM 3 OP1 G A 9 13.894 1.918 58.019 1.00 34.13 O
ATOM 4 OP2 G A 9 15.722 0.705 56.680 1.00 34.26 O
ATOM 5 O5' G A 9 15.363 3.157 56.439 1.00 33.40 O
ATOM 6 C5' G A 9 14.916 4.426 56.882 1.00 32.99 C
ATOM 7 C4' G A 9 15.282 5.486 55.862 1.00 32.49 C
ATOM 8 O4' G A 9 16.725 5.590 55.766 1.00 32.74 O
ATOM 9 C3' G A 9 14.826 5.179 54.446 1.00 32.85 C
ATOM 10 O3' G A 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 11 C2' G A 9 15.812 6.006 53.630 1.00 32.62 C
ATOM 12 O2' G A 9 15.449 7.374 53.621 1.00 32.54 O
ATOM 13 C1' G A 9 17.103 5.813 54.421 1.00 32.13 C
ATOM 14 N9 G A 9 17.944 4.691 54.000 1.00 31.64 N
ATOM 15 C8 G A 9 17.759 3.357 54.282 1.00 31.52 C
ATOM 16 N7 G A 9 18.691 2.586 53.789 1.00 31.69 N
ATOM 17 C5 G A 9 19.552 3.465 53.145 1.00 31.07 C
ATOM 18 C6 G A 9 20.743 3.212 52.423 1.00 31.20 C
ATOM 19 O6 G A 9 21.291 2.123 52.202 1.00 31.45 O
ATOM 20 N1 G A 9 21.307 4.385 51.927 1.00 30.57 N
ATOM 21 C2 G A 9 20.787 5.644 52.107 1.00 30.77 C
ATOM 22 N2 G A 9 21.473 6.658 51.558 1.00 30.93 N
ATOM 23 N3 G A 9 19.673 5.895 52.780 1.00 30.59 N
ATOM 24 C4 G A 9 19.108 4.762 53.267 1.00 31.05 C
ATOM 25 P U A 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 26 OP1 U A 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 27 OP2 U A 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 28 O5' U A 10 12.988 5.099 51.860 1.00 34.28 O
TER
ATOM 1 O3' A B 31 25.195 14.447 48.988 1.00 31.83 O
ATOM 2 P G B 32 23.972 14.507 47.958 1.00 32.12 P
ATOM 3 OP1 G B 32 24.526 14.805 46.619 1.00 32.24 O
ATOM 4 OP2 G B 32 22.929 15.381 48.542 1.00 32.71 O
ATOM 5 O5' G B 32 23.424 13.006 47.958 1.00 31.36 O
ATOM 6 C5' G B 32 24.276 11.939 47.556 1.00 31.03 C
ATOM 7 C4' G B 32 23.782 10.626 48.130 1.00 30.45 C
ATOM 8 O4' G B 32 23.816 10.692 49.578 1.00 30.20 O
ATOM 9 C3' G B 32 22.340 10.292 47.784 1.00 30.38 C
ATOM 10 O3' G B 32 22.302 9.589 46.549 1.00 31.27 O
ATOM 11 C2' G B 32 21.922 9.412 48.960 1.00 29.97 C
ATOM 12 O2' G B 32 22.356 8.075 48.816 1.00 29.50 O
ATOM 13 C1' G B 32 22.674 10.056 50.121 1.00 29.45 C
ATOM 14 N9 G B 32 21.927 11.043 50.897 1.00 28.83 N
ATOM 15 C8 G B 32 21.955 12.408 50.744 1.00 28.50 C
ATOM 16 N7 G B 32 21.205 13.043 51.600 1.00 28.44 N
ATOM 17 C5 G B 32 20.650 12.037 52.379 1.00 28.33 C
ATOM 18 C6 G B 32 19.755 12.118 53.472 1.00 28.50 C
ATOM 19 O6 G B 32 19.257 13.130 53.984 1.00 29.10 O
ATOM 20 N1 G B 32 19.443 10.858 53.977 1.00 28.35 N
ATOM 21 C2 G B 32 19.935 9.670 53.491 1.00 27.81 C
ATOM 22 N2 G B 32 19.523 8.554 54.110 1.00 27.79 N
ATOM 23 N3 G B 32 20.772 9.582 52.467 1.00 27.93 N
ATOM 24 C4 G B 32 21.087 10.800 51.962 1.00 28.34 C
ATOM 25 P A B 33 21.172 9.907 45.462 1.00 31.52 P
ATOM 26 OP1 A B 33 21.362 8.958 44.342 1.00 30.72 O
ATOM 27 OP2 A B 33 21.169 11.364 45.203 1.00 31.47 O
ATOM 28 O5' A B 33 19.817 9.555 46.239 1.00 31.25 O
TER
Atoms:
OP1: (13.894,1.918,58.019)
OP2: (15.722,0.705,56.680)
C3': (14.826,5.179,54.446)
C1': (17.103,5.813,54.421)
C5': (14.916,4.426,56.882)
O6: (21.291,2.123,52.202)
O4': (16.725,5.590,55.766)
C8: (17.759,3.357,54.282)
C2: (20.787,5.644,52.107)
C6: (20.743,3.212,52.423)
C5: (19.552,3.465,53.145)
C4: (19.108,4.762,53.267)
P: (15.244,1.899,57.413)
C4': (15.282,5.486,55.862)
C2': (15.812,6.006,53.630)
O2': (15.449,7.374,53.621)
N1: (21.307,4.385,51.927)
N2: (21.473,6.658,51.558)
N3: (19.673,5.895,52.780)
N7: (18.691,2.586,53.789)
N9: (17.944,4.691,54.000)
O5': (15.363,3.157,56.439)
O3': (13.483,5.625,54.263)
OP2: (15.722,0.705,56.680)
C3': (14.826,5.179,54.446)
C1': (17.103,5.813,54.421)
C5': (14.916,4.426,56.882)
O6: (21.291,2.123,52.202)
O4': (16.725,5.590,55.766)
C8: (17.759,3.357,54.282)
C2: (20.787,5.644,52.107)
C6: (20.743,3.212,52.423)
C5: (19.552,3.465,53.145)
C4: (19.108,4.762,53.267)
P: (15.244,1.899,57.413)
C4': (15.282,5.486,55.862)
C2': (15.812,6.006,53.630)
O2': (15.449,7.374,53.621)
N1: (21.307,4.385,51.927)
N2: (21.473,6.658,51.558)
N3: (19.673,5.895,52.780)
N7: (18.691,2.586,53.789)
N9: (17.944,4.691,54.000)
O5': (15.363,3.157,56.439)
O3': (13.483,5.625,54.263)
OP1: (24.526,14.805,46.619)
OP2: (22.929,15.381,48.542)
C3': (22.340,10.292,47.784)
C1': (22.674,10.056,50.121)
C5': (24.276,11.939,47.556)
O6: (19.257,13.130,53.984)
O4': (23.816,10.692,49.578)
C8: (21.955,12.408,50.744)
C2: (19.935,9.670,53.491)
C6: (19.755,12.118,53.472)
C5: (20.650,12.037,52.379)
C4: (21.087,10.800,51.962)
P: (23.972,14.507,47.958)
C4': (23.782,10.626,48.130)
C2': (21.922,9.412,48.960)
O2': (22.356,8.075,48.816)
N1: (19.443,10.858,53.977)
N2: (19.523,8.554,54.110)
N3: (20.772,9.582,52.467)
N7: (21.205,13.043,51.600)
N9: (21.927,11.043,50.897)
O5': (23.424,13.006,47.958)
O3': (22.302,9.589,46.549)
OP2: (22.929,15.381,48.542)
C3': (22.340,10.292,47.784)
C1': (22.674,10.056,50.121)
C5': (24.276,11.939,47.556)
O6: (19.257,13.130,53.984)
O4': (23.816,10.692,49.578)
C8: (21.955,12.408,50.744)
C2: (19.935,9.670,53.491)
C6: (19.755,12.118,53.472)
C5: (20.650,12.037,52.379)
C4: (21.087,10.800,51.962)
P: (23.972,14.507,47.958)
C4': (23.782,10.626,48.130)
C2': (21.922,9.412,48.960)
O2': (22.356,8.075,48.816)
N1: (19.443,10.858,53.977)
N2: (19.523,8.554,54.110)
N3: (20.772,9.582,52.467)
N7: (21.205,13.043,51.600)
N9: (21.927,11.043,50.897)
O5': (23.424,13.006,47.958)
O3': (22.302,9.589,46.549)
Image (generated by PyMOL):