Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P41:P42
Extra
PDB:
ATOM 1 O3' U A 40 -0.433 -47.444 4.763 1.00 60.68 O
ATOM 2 P A A 41 -0.864 -47.094 6.260 1.00 59.48 P
ATOM 3 OP1 A A 41 -2.079 -46.252 6.179 1.00 59.68 O
ATOM 4 OP2 A A 41 0.323 -46.598 6.993 1.00 59.54 O
ATOM 5 O5' A A 41 -1.285 -48.521 6.842 1.00 58.88 O
ATOM 6 C5' A A 41 -2.421 -49.194 6.306 1.00 57.96 C
ATOM 7 C4' A A 41 -3.400 -49.561 7.406 1.00 57.11 C
ATOM 8 O4' A A 41 -2.695 -50.333 8.403 1.00 56.44 O
ATOM 9 C3' A A 41 -4.052 -48.394 8.144 1.00 57.03 C
ATOM 10 O3' A A 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 11 C2' A A 41 -3.323 -48.360 9.487 1.00 56.45 C
ATOM 12 O2' A A 41 -4.151 -47.932 10.547 1.00 57.01 O
ATOM 13 C1' A A 41 -2.986 -49.829 9.685 1.00 55.63 C
ATOM 14 N9 A A 41 -1.836 -50.074 10.549 1.00 54.17 N
ATOM 15 C8 A A 41 -0.511 -50.064 10.203 1.00 53.70 C
ATOM 16 N7 A A 41 0.301 -50.326 11.200 1.00 53.18 N
ATOM 17 C5 A A 41 -0.553 -50.521 12.272 1.00 53.04 C
ATOM 18 C6 A A 41 -0.327 -50.836 13.628 1.00 52.88 C
ATOM 19 N6 A A 41 0.890 -51.011 14.150 1.00 52.85 N
ATOM 20 N1 A A 41 -1.406 -50.967 14.432 1.00 52.78 N
ATOM 21 C2 A A 41 -2.630 -50.787 13.920 1.00 52.62 C
ATOM 22 N3 A A 41 -2.964 -50.494 12.664 1.00 52.74 N
ATOM 23 C4 A A 41 -1.873 -50.371 11.888 1.00 53.23 C
ATOM 24 P U A 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 25 OP1 U A 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 26 OP2 U A 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 27 O5' U A 42 -7.820 -48.976 7.644 1.00 59.11 O
TER
ATOM 1 O3' A B 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 2 P U B 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 3 OP1 U B 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 4 OP2 U B 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 5 O5' U B 42 -7.820 -48.976 7.644 1.00 59.11 O
ATOM 6 C5' U B 42 -7.860 -50.381 7.376 1.00 59.14 C
ATOM 7 C4' U B 42 -9.021 -51.069 8.078 1.00 59.23 C
ATOM 8 O4' U B 42 -8.780 -51.120 9.509 1.00 59.42 O
ATOM 9 C3' U B 42 -10.374 -50.384 7.949 1.00 59.21 C
ATOM 10 O3' U B 42 -11.012 -50.765 6.736 1.00 59.18 O
ATOM 11 C2' U B 42 -11.109 -50.902 9.182 1.00 59.37 C
ATOM 12 O2' U B 42 -11.633 -52.209 9.022 1.00 59.03 O
ATOM 13 C1' U B 42 -9.988 -50.903 10.224 1.00 59.45 C
ATOM 14 N1 U B 42 -9.856 -49.642 11.056 1.00 59.65 N
ATOM 15 C2 U B 42 -10.890 -49.196 11.878 1.00 59.73 C
ATOM 16 O2 U B 42 -11.971 -49.745 12.002 1.00 59.69 O
ATOM 17 N3 U B 42 -10.621 -48.040 12.575 1.00 59.81 N
ATOM 18 C4 U B 42 -9.455 -47.295 12.545 1.00 59.86 C
ATOM 19 O4 U B 42 -9.365 -46.280 13.227 1.00 60.07 O
ATOM 20 C5 U B 42 -8.426 -47.813 11.680 1.00 60.05 C
ATOM 21 C6 U B 42 -8.663 -48.938 10.990 1.00 59.89 C
ATOM 22 P C B 43 -11.787 -49.678 5.851 1.00 59.09 P
ATOM 23 OP1 C B 43 -12.286 -50.349 4.629 1.00 59.30 O
ATOM 24 OP2 C B 43 -10.927 -48.483 5.714 1.00 59.17 O
ATOM 25 O5' C B 43 -13.035 -49.316 6.780 1.00 59.03 O
TER
ATOM 2 P A A 41 -0.864 -47.094 6.260 1.00 59.48 P
ATOM 3 OP1 A A 41 -2.079 -46.252 6.179 1.00 59.68 O
ATOM 4 OP2 A A 41 0.323 -46.598 6.993 1.00 59.54 O
ATOM 5 O5' A A 41 -1.285 -48.521 6.842 1.00 58.88 O
ATOM 6 C5' A A 41 -2.421 -49.194 6.306 1.00 57.96 C
ATOM 7 C4' A A 41 -3.400 -49.561 7.406 1.00 57.11 C
ATOM 8 O4' A A 41 -2.695 -50.333 8.403 1.00 56.44 O
ATOM 9 C3' A A 41 -4.052 -48.394 8.144 1.00 57.03 C
ATOM 10 O3' A A 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 11 C2' A A 41 -3.323 -48.360 9.487 1.00 56.45 C
ATOM 12 O2' A A 41 -4.151 -47.932 10.547 1.00 57.01 O
ATOM 13 C1' A A 41 -2.986 -49.829 9.685 1.00 55.63 C
ATOM 14 N9 A A 41 -1.836 -50.074 10.549 1.00 54.17 N
ATOM 15 C8 A A 41 -0.511 -50.064 10.203 1.00 53.70 C
ATOM 16 N7 A A 41 0.301 -50.326 11.200 1.00 53.18 N
ATOM 17 C5 A A 41 -0.553 -50.521 12.272 1.00 53.04 C
ATOM 18 C6 A A 41 -0.327 -50.836 13.628 1.00 52.88 C
ATOM 19 N6 A A 41 0.890 -51.011 14.150 1.00 52.85 N
ATOM 20 N1 A A 41 -1.406 -50.967 14.432 1.00 52.78 N
ATOM 21 C2 A A 41 -2.630 -50.787 13.920 1.00 52.62 C
ATOM 22 N3 A A 41 -2.964 -50.494 12.664 1.00 52.74 N
ATOM 23 C4 A A 41 -1.873 -50.371 11.888 1.00 53.23 C
ATOM 24 P U A 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 25 OP1 U A 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 26 OP2 U A 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 27 O5' U A 42 -7.820 -48.976 7.644 1.00 59.11 O
TER
ATOM 1 O3' A B 41 -5.436 -48.668 8.313 1.00 57.76 O
ATOM 2 P U B 42 -6.524 -48.102 7.287 1.00 58.69 P
ATOM 3 OP1 U B 42 -6.105 -48.431 5.905 1.00 58.87 O
ATOM 4 OP2 U B 42 -6.785 -46.695 7.654 1.00 58.89 O
ATOM 5 O5' U B 42 -7.820 -48.976 7.644 1.00 59.11 O
ATOM 6 C5' U B 42 -7.860 -50.381 7.376 1.00 59.14 C
ATOM 7 C4' U B 42 -9.021 -51.069 8.078 1.00 59.23 C
ATOM 8 O4' U B 42 -8.780 -51.120 9.509 1.00 59.42 O
ATOM 9 C3' U B 42 -10.374 -50.384 7.949 1.00 59.21 C
ATOM 10 O3' U B 42 -11.012 -50.765 6.736 1.00 59.18 O
ATOM 11 C2' U B 42 -11.109 -50.902 9.182 1.00 59.37 C
ATOM 12 O2' U B 42 -11.633 -52.209 9.022 1.00 59.03 O
ATOM 13 C1' U B 42 -9.988 -50.903 10.224 1.00 59.45 C
ATOM 14 N1 U B 42 -9.856 -49.642 11.056 1.00 59.65 N
ATOM 15 C2 U B 42 -10.890 -49.196 11.878 1.00 59.73 C
ATOM 16 O2 U B 42 -11.971 -49.745 12.002 1.00 59.69 O
ATOM 17 N3 U B 42 -10.621 -48.040 12.575 1.00 59.81 N
ATOM 18 C4 U B 42 -9.455 -47.295 12.545 1.00 59.86 C
ATOM 19 O4 U B 42 -9.365 -46.280 13.227 1.00 60.07 O
ATOM 20 C5 U B 42 -8.426 -47.813 11.680 1.00 60.05 C
ATOM 21 C6 U B 42 -8.663 -48.938 10.990 1.00 59.89 C
ATOM 22 P C B 43 -11.787 -49.678 5.851 1.00 59.09 P
ATOM 23 OP1 C B 43 -12.286 -50.349 4.629 1.00 59.30 O
ATOM 24 OP2 C B 43 -10.927 -48.483 5.714 1.00 59.17 O
ATOM 25 O5' C B 43 -13.035 -49.316 6.780 1.00 59.03 O
TER
Atoms:
OP1: (-2.079,-46.252,6.179)
OP2: (0.323,-46.598,6.993)
C3': (-4.052,-48.394,8.144)
C1': (-2.986,-49.829,9.685)
C5': (-2.421,-49.194,6.306)
O4': (-2.695,-50.333,8.403)
C8: (-0.511,-50.064,10.203)
O2': (-4.151,-47.932,10.547)
C6: (-0.327,-50.836,13.628)
C5: (-0.553,-50.521,12.272)
C4: (-1.873,-50.371,11.888)
P: (-0.864,-47.094,6.260)
C4': (-3.400,-49.561,7.406)
C2': (-3.323,-48.360,9.487)
C2: (-2.630,-50.787,13.920)
N1: (-1.406,-50.967,14.432)
N3: (-2.964,-50.494,12.664)
N6: (0.890,-51.011,14.150)
N7: (0.301,-50.326,11.200)
N9: (-1.836,-50.074,10.549)
O5': (-1.285,-48.521,6.842)
O3': (-5.436,-48.668,8.313)
OP2: (0.323,-46.598,6.993)
C3': (-4.052,-48.394,8.144)
C1': (-2.986,-49.829,9.685)
C5': (-2.421,-49.194,6.306)
O4': (-2.695,-50.333,8.403)
C8: (-0.511,-50.064,10.203)
O2': (-4.151,-47.932,10.547)
C6: (-0.327,-50.836,13.628)
C5: (-0.553,-50.521,12.272)
C4: (-1.873,-50.371,11.888)
P: (-0.864,-47.094,6.260)
C4': (-3.400,-49.561,7.406)
C2': (-3.323,-48.360,9.487)
C2: (-2.630,-50.787,13.920)
N1: (-1.406,-50.967,14.432)
N3: (-2.964,-50.494,12.664)
N6: (0.890,-51.011,14.150)
N7: (0.301,-50.326,11.200)
N9: (-1.836,-50.074,10.549)
O5': (-1.285,-48.521,6.842)
O3': (-5.436,-48.668,8.313)
C4: (-9.455,-47.295,12.545)
N3: (-10.621,-48.040,12.575)
OP1: (-6.105,-48.431,5.905)
OP2: (-6.785,-46.695,7.654)
C2: (-10.890,-49.196,11.878)
C1': (-9.988,-50.903,10.224)
C3': (-10.374,-50.384,7.949)
O5': (-7.820,-48.976,7.644)
O4': (-8.780,-51.120,9.509)
C5': (-7.860,-50.381,7.376)
P: (-6.524,-48.102,7.287)
C4': (-9.021,-51.069,8.078)
C2': (-11.109,-50.902,9.182)
O2': (-11.633,-52.209,9.022)
N1: (-9.856,-49.642,11.056)
O4: (-9.365,-46.280,13.227)
O2: (-11.971,-49.745,12.002)
C6: (-8.663,-48.938,10.990)
C5: (-8.426,-47.813,11.680)
O3': (-11.012,-50.765,6.736)
N3: (-10.621,-48.040,12.575)
OP1: (-6.105,-48.431,5.905)
OP2: (-6.785,-46.695,7.654)
C2: (-10.890,-49.196,11.878)
C1': (-9.988,-50.903,10.224)
C3': (-10.374,-50.384,7.949)
O5': (-7.820,-48.976,7.644)
O4': (-8.780,-51.120,9.509)
C5': (-7.860,-50.381,7.376)
P: (-6.524,-48.102,7.287)
C4': (-9.021,-51.069,8.078)
C2': (-11.109,-50.902,9.182)
O2': (-11.633,-52.209,9.022)
N1: (-9.856,-49.642,11.056)
O4: (-9.365,-46.280,13.227)
O2: (-11.971,-49.745,12.002)
C6: (-8.663,-48.938,10.990)
C5: (-8.426,-47.813,11.680)
O3': (-11.012,-50.765,6.736)
Image (generated by PyMOL):