Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:R41:R42
Extra
PDB:
ATOM 1 O3' U A 40 -5.040 -10.703 59.553 1.00 72.19 O
ATOM 2 P A A 41 -4.587 -12.128 60.123 1.00 71.29 P
ATOM 3 OP1 A A 41 -4.709 -13.116 59.027 1.00 71.27 O
ATOM 4 OP2 A A 41 -5.295 -12.354 61.402 1.00 71.40 O
ATOM 5 O5' A A 41 -3.029 -11.915 60.422 1.00 69.38 O
ATOM 6 C5' A A 41 -2.290 -10.948 59.686 1.00 66.32 C
ATOM 7 C4' A A 41 -0.944 -10.686 60.339 1.00 64.00 C
ATOM 8 O4' A A 41 -1.133 -9.855 61.513 1.00 62.83 O
ATOM 9 C3' A A 41 -0.215 -11.931 60.826 1.00 62.78 C
ATOM 10 O3' A A 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 11 C2' A A 41 -0.677 -12.035 62.275 1.00 62.29 C
ATOM 12 O2' A A 41 0.256 -12.717 63.091 1.00 62.48 O
ATOM 13 C1' A A 41 -0.751 -10.566 62.675 1.00 61.87 C
ATOM 14 N9 A A 41 -1.730 -10.296 63.724 1.00 60.83 N
ATOM 15 C8 A A 41 -3.076 -10.118 63.568 1.00 60.64 C
ATOM 16 N7 A A 41 -3.713 -9.889 64.692 1.00 60.31 N
ATOM 17 C5 A A 41 -2.715 -9.919 65.652 1.00 59.94 C
ATOM 18 C6 A A 41 -2.738 -9.747 67.050 1.00 59.73 C
ATOM 19 N6 A A 41 -3.854 -9.500 67.744 1.00 59.37 N
ATOM 20 N1 A A 41 -1.564 -9.839 67.710 1.00 59.63 N
ATOM 21 C2 A A 41 -0.450 -10.086 67.012 1.00 59.58 C
ATOM 22 N3 A A 41 -0.304 -10.266 65.700 1.00 59.83 N
ATOM 23 C4 A A 41 -1.486 -10.169 65.072 1.00 60.17 C
ATOM 24 P U A 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 25 OP1 U A 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 26 OP2 U A 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 27 O5' U A 42 3.522 -11.945 59.850 1.00 60.16 O
TER
ATOM 1 O3' A B 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 2 P U B 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 3 OP1 U B 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 4 OP2 U B 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 5 O5' U B 42 3.522 -11.945 59.850 1.00 60.16 O
ATOM 6 C5' U B 42 3.893 -10.574 59.694 1.00 58.58 C
ATOM 7 C4' U B 42 5.299 -10.296 60.197 1.00 57.44 C
ATOM 8 O4' U B 42 5.341 -10.337 61.648 1.00 57.26 O
ATOM 9 C3' U B 42 6.364 -11.303 59.792 1.00 56.76 C
ATOM 10 O3' U B 42 6.789 -11.103 58.454 1.00 55.75 O
ATOM 11 C2' U B 42 7.452 -10.982 60.812 1.00 57.09 C
ATOM 12 O2' U B 42 8.187 -9.807 60.516 1.00 57.13 O
ATOM 13 C1' U B 42 6.614 -10.797 62.077 1.00 57.17 C
ATOM 14 N1 U B 42 6.484 -12.068 62.886 1.00 57.53 N
ATOM 15 C2 U B 42 7.582 -12.553 63.590 1.00 57.65 C
ATOM 16 O2 U B 42 8.678 -12.017 63.612 1.00 57.81 O
ATOM 17 N3 U B 42 7.355 -13.717 64.287 1.00 57.71 N
ATOM 18 C4 U B 42 6.173 -14.438 64.355 1.00 57.70 C
ATOM 19 O4 U B 42 6.131 -15.465 65.025 1.00 57.86 O
ATOM 20 C5 U B 42 5.075 -13.883 63.601 1.00 57.38 C
ATOM 21 C6 U B 42 5.271 -12.748 62.913 1.00 57.61 C
ATOM 22 P C B 43 7.235 -12.356 57.562 1.00 54.96 P
ATOM 23 OP1 C B 43 7.586 -11.860 56.213 1.00 55.32 O
ATOM 24 OP2 C B 43 6.217 -13.421 57.697 1.00 55.28 O
ATOM 25 O5' C B 43 8.570 -12.836 58.294 1.00 53.99 O
TER
ATOM 2 P A A 41 -4.587 -12.128 60.123 1.00 71.29 P
ATOM 3 OP1 A A 41 -4.709 -13.116 59.027 1.00 71.27 O
ATOM 4 OP2 A A 41 -5.295 -12.354 61.402 1.00 71.40 O
ATOM 5 O5' A A 41 -3.029 -11.915 60.422 1.00 69.38 O
ATOM 6 C5' A A 41 -2.290 -10.948 59.686 1.00 66.32 C
ATOM 7 C4' A A 41 -0.944 -10.686 60.339 1.00 64.00 C
ATOM 8 O4' A A 41 -1.133 -9.855 61.513 1.00 62.83 O
ATOM 9 C3' A A 41 -0.215 -11.931 60.826 1.00 62.78 C
ATOM 10 O3' A A 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 11 C2' A A 41 -0.677 -12.035 62.275 1.00 62.29 C
ATOM 12 O2' A A 41 0.256 -12.717 63.091 1.00 62.48 O
ATOM 13 C1' A A 41 -0.751 -10.566 62.675 1.00 61.87 C
ATOM 14 N9 A A 41 -1.730 -10.296 63.724 1.00 60.83 N
ATOM 15 C8 A A 41 -3.076 -10.118 63.568 1.00 60.64 C
ATOM 16 N7 A A 41 -3.713 -9.889 64.692 1.00 60.31 N
ATOM 17 C5 A A 41 -2.715 -9.919 65.652 1.00 59.94 C
ATOM 18 C6 A A 41 -2.738 -9.747 67.050 1.00 59.73 C
ATOM 19 N6 A A 41 -3.854 -9.500 67.744 1.00 59.37 N
ATOM 20 N1 A A 41 -1.564 -9.839 67.710 1.00 59.63 N
ATOM 21 C2 A A 41 -0.450 -10.086 67.012 1.00 59.58 C
ATOM 22 N3 A A 41 -0.304 -10.266 65.700 1.00 59.83 N
ATOM 23 C4 A A 41 -1.486 -10.169 65.072 1.00 60.17 C
ATOM 24 P U A 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 25 OP1 U A 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 26 OP2 U A 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 27 O5' U A 42 3.522 -11.945 59.850 1.00 60.16 O
TER
ATOM 1 O3' A B 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 2 P U B 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 3 OP1 U B 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 4 OP2 U B 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 5 O5' U B 42 3.522 -11.945 59.850 1.00 60.16 O
ATOM 6 C5' U B 42 3.893 -10.574 59.694 1.00 58.58 C
ATOM 7 C4' U B 42 5.299 -10.296 60.197 1.00 57.44 C
ATOM 8 O4' U B 42 5.341 -10.337 61.648 1.00 57.26 O
ATOM 9 C3' U B 42 6.364 -11.303 59.792 1.00 56.76 C
ATOM 10 O3' U B 42 6.789 -11.103 58.454 1.00 55.75 O
ATOM 11 C2' U B 42 7.452 -10.982 60.812 1.00 57.09 C
ATOM 12 O2' U B 42 8.187 -9.807 60.516 1.00 57.13 O
ATOM 13 C1' U B 42 6.614 -10.797 62.077 1.00 57.17 C
ATOM 14 N1 U B 42 6.484 -12.068 62.886 1.00 57.53 N
ATOM 15 C2 U B 42 7.582 -12.553 63.590 1.00 57.65 C
ATOM 16 O2 U B 42 8.678 -12.017 63.612 1.00 57.81 O
ATOM 17 N3 U B 42 7.355 -13.717 64.287 1.00 57.71 N
ATOM 18 C4 U B 42 6.173 -14.438 64.355 1.00 57.70 C
ATOM 19 O4 U B 42 6.131 -15.465 65.025 1.00 57.86 O
ATOM 20 C5 U B 42 5.075 -13.883 63.601 1.00 57.38 C
ATOM 21 C6 U B 42 5.271 -12.748 62.913 1.00 57.61 C
ATOM 22 P C B 43 7.235 -12.356 57.562 1.00 54.96 P
ATOM 23 OP1 C B 43 7.586 -11.860 56.213 1.00 55.32 O
ATOM 24 OP2 C B 43 6.217 -13.421 57.697 1.00 55.28 O
ATOM 25 O5' C B 43 8.570 -12.836 58.294 1.00 53.99 O
TER
Atoms:
OP1: (-4.709,-13.116,59.027)
OP2: (-5.295,-12.354,61.402)
C3': (-0.215,-11.931,60.826)
C1': (-0.751,-10.566,62.675)
C5': (-2.290,-10.948,59.686)
O4': (-1.133,-9.855,61.513)
C8: (-3.076,-10.118,63.568)
O2': (0.256,-12.717,63.091)
C6: (-2.738,-9.747,67.050)
C5: (-2.715,-9.919,65.652)
C4: (-1.486,-10.169,65.072)
P: (-4.587,-12.128,60.123)
C4': (-0.944,-10.686,60.339)
C2': (-0.677,-12.035,62.275)
C2: (-0.450,-10.086,67.012)
N1: (-1.564,-9.839,67.710)
N3: (-0.304,-10.266,65.700)
N6: (-3.854,-9.500,67.744)
N7: (-3.713,-9.889,64.692)
N9: (-1.730,-10.296,63.724)
O5': (-3.029,-11.915,60.422)
O3': (1.191,-11.737,60.740)
OP2: (-5.295,-12.354,61.402)
C3': (-0.215,-11.931,60.826)
C1': (-0.751,-10.566,62.675)
C5': (-2.290,-10.948,59.686)
O4': (-1.133,-9.855,61.513)
C8: (-3.076,-10.118,63.568)
O2': (0.256,-12.717,63.091)
C6: (-2.738,-9.747,67.050)
C5: (-2.715,-9.919,65.652)
C4: (-1.486,-10.169,65.072)
P: (-4.587,-12.128,60.123)
C4': (-0.944,-10.686,60.339)
C2': (-0.677,-12.035,62.275)
C2: (-0.450,-10.086,67.012)
N1: (-1.564,-9.839,67.710)
N3: (-0.304,-10.266,65.700)
N6: (-3.854,-9.500,67.744)
N7: (-3.713,-9.889,64.692)
N9: (-1.730,-10.296,63.724)
O5': (-3.029,-11.915,60.422)
O3': (1.191,-11.737,60.740)
C4: (6.173,-14.438,64.355)
N3: (7.355,-13.717,64.287)
OP1: (1.574,-11.816,58.280)
OP2: (1.939,-13.888,59.737)
C2: (7.582,-12.553,63.590)
C1': (6.614,-10.797,62.077)
C3': (6.364,-11.303,59.792)
O5': (3.522,-11.945,59.850)
O4': (5.341,-10.337,61.648)
C5': (3.893,-10.574,59.694)
P: (2.021,-12.422,59.556)
C4': (5.299,-10.296,60.197)
C2': (7.452,-10.982,60.812)
O2': (8.187,-9.807,60.516)
N1: (6.484,-12.068,62.886)
O4: (6.131,-15.465,65.025)
O2: (8.678,-12.017,63.612)
C6: (5.271,-12.748,62.913)
C5: (5.075,-13.883,63.601)
O3': (6.789,-11.103,58.454)
N3: (7.355,-13.717,64.287)
OP1: (1.574,-11.816,58.280)
OP2: (1.939,-13.888,59.737)
C2: (7.582,-12.553,63.590)
C1': (6.614,-10.797,62.077)
C3': (6.364,-11.303,59.792)
O5': (3.522,-11.945,59.850)
O4': (5.341,-10.337,61.648)
C5': (3.893,-10.574,59.694)
P: (2.021,-12.422,59.556)
C4': (5.299,-10.296,60.197)
C2': (7.452,-10.982,60.812)
O2': (8.187,-9.807,60.516)
N1: (6.484,-12.068,62.886)
O4: (6.131,-15.465,65.025)
O2: (8.678,-12.017,63.612)
C6: (5.271,-12.748,62.913)
C5: (5.075,-13.883,63.601)
O3': (6.789,-11.103,58.454)
Image (generated by PyMOL):