Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q41:Q42
Extra
PDB:
ATOM 1 O3' U A 40 -3.591 -45.431 45.238 1.00 66.87 O
ATOM 2 P A A 41 -3.287 -45.282 43.675 1.00 66.17 P
ATOM 3 OP1 A A 41 -4.115 -44.166 43.158 1.00 66.38 O
ATOM 4 OP2 A A 41 -3.355 -46.612 43.023 1.00 66.13 O
ATOM 5 O5' A A 41 -1.762 -44.799 43.704 1.00 64.09 O
ATOM 6 C5' A A 41 -0.785 -45.542 44.430 1.00 61.01 C
ATOM 7 C4' A A 41 0.347 -45.961 43.510 1.00 58.95 C
ATOM 8 O4' A A 41 -0.196 -46.697 42.382 1.00 58.17 O
ATOM 9 C3' A A 41 1.155 -44.806 42.922 1.00 57.85 C
ATOM 10 O3' A A 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 11 C2' A A 41 0.738 -44.778 41.453 1.00 57.54 C
ATOM 12 O2' A A 41 1.771 -44.322 40.600 1.00 57.75 O
ATOM 13 C1' A A 41 0.443 -46.254 41.203 1.00 57.05 C
ATOM 14 N9 A A 41 -0.419 -46.501 40.048 1.00 55.50 N
ATOM 15 C8 A A 41 -1.773 -46.689 40.041 1.00 55.02 C
ATOM 16 N7 A A 41 -2.276 -46.888 38.844 1.00 54.50 N
ATOM 17 C5 A A 41 -1.176 -46.824 38.009 1.00 54.27 C
ATOM 18 C6 A A 41 -1.029 -46.955 36.612 1.00 54.14 C
ATOM 19 N6 A A 41 -2.052 -47.185 35.788 1.00 54.08 N
ATOM 20 N1 A A 41 0.214 -46.839 36.090 1.00 54.41 N
ATOM 21 C2 A A 41 1.245 -46.604 36.917 1.00 54.58 C
ATOM 22 N3 A A 41 1.229 -46.466 38.246 1.00 54.63 N
ATOM 23 C4 A A 41 -0.021 -46.586 38.734 1.00 54.75 C
ATOM 24 P U A 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 25 OP1 U A 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 26 OP2 U A 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 27 O5' U A 42 4.853 -44.869 43.955 1.00 55.29 O
TER
ATOM 1 O3' A B 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 2 P U B 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 3 OP1 U B 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 4 OP2 U B 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 5 O5' U B 42 4.853 -44.869 43.955 1.00 55.29 O
ATOM 6 C5' U B 42 5.263 -46.161 44.388 1.00 53.77 C
ATOM 7 C4' U B 42 6.672 -46.470 43.920 1.00 52.62 C
ATOM 8 O4' U B 42 6.712 -46.472 42.471 1.00 52.48 O
ATOM 9 C3' U B 42 7.725 -45.442 44.296 1.00 52.03 C
ATOM 10 O3' U B 42 8.185 -45.636 45.614 1.00 51.61 O
ATOM 11 C2' U B 42 8.799 -45.727 43.257 1.00 52.10 C
ATOM 12 O2' U B 42 9.535 -46.904 43.523 1.00 52.62 O
ATOM 13 C1' U B 42 7.930 -45.902 42.014 1.00 51.92 C
ATOM 14 N1 U B 42 7.651 -44.608 41.284 1.00 51.27 N
ATOM 15 C2 U B 42 8.685 -43.917 40.671 1.00 50.95 C
ATOM 16 O2 U B 42 9.847 -44.287 40.673 1.00 50.84 O
ATOM 17 N3 U B 42 8.308 -42.751 40.045 1.00 50.73 N
ATOM 18 C4 U B 42 7.033 -42.215 39.967 1.00 50.72 C
ATOM 19 O4 U B 42 6.847 -41.164 39.368 1.00 50.74 O
ATOM 20 C5 U B 42 6.008 -42.983 40.623 1.00 51.01 C
ATOM 21 C6 U B 42 6.353 -44.120 41.239 1.00 51.28 C
ATOM 22 P C B 43 8.484 -44.358 46.528 1.00 51.37 P
ATOM 23 OP1 C B 43 8.852 -44.854 47.874 1.00 51.23 O
ATOM 24 OP2 C B 43 7.362 -43.398 46.393 1.00 51.24 O
ATOM 25 O5' C B 43 9.774 -43.728 45.819 1.00 50.47 O
TER
ATOM 2 P A A 41 -3.287 -45.282 43.675 1.00 66.17 P
ATOM 3 OP1 A A 41 -4.115 -44.166 43.158 1.00 66.38 O
ATOM 4 OP2 A A 41 -3.355 -46.612 43.023 1.00 66.13 O
ATOM 5 O5' A A 41 -1.762 -44.799 43.704 1.00 64.09 O
ATOM 6 C5' A A 41 -0.785 -45.542 44.430 1.00 61.01 C
ATOM 7 C4' A A 41 0.347 -45.961 43.510 1.00 58.95 C
ATOM 8 O4' A A 41 -0.196 -46.697 42.382 1.00 58.17 O
ATOM 9 C3' A A 41 1.155 -44.806 42.922 1.00 57.85 C
ATOM 10 O3' A A 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 11 C2' A A 41 0.738 -44.778 41.453 1.00 57.54 C
ATOM 12 O2' A A 41 1.771 -44.322 40.600 1.00 57.75 O
ATOM 13 C1' A A 41 0.443 -46.254 41.203 1.00 57.05 C
ATOM 14 N9 A A 41 -0.419 -46.501 40.048 1.00 55.50 N
ATOM 15 C8 A A 41 -1.773 -46.689 40.041 1.00 55.02 C
ATOM 16 N7 A A 41 -2.276 -46.888 38.844 1.00 54.50 N
ATOM 17 C5 A A 41 -1.176 -46.824 38.009 1.00 54.27 C
ATOM 18 C6 A A 41 -1.029 -46.955 36.612 1.00 54.14 C
ATOM 19 N6 A A 41 -2.052 -47.185 35.788 1.00 54.08 N
ATOM 20 N1 A A 41 0.214 -46.839 36.090 1.00 54.41 N
ATOM 21 C2 A A 41 1.245 -46.604 36.917 1.00 54.58 C
ATOM 22 N3 A A 41 1.229 -46.466 38.246 1.00 54.63 N
ATOM 23 C4 A A 41 -0.021 -46.586 38.734 1.00 54.75 C
ATOM 24 P U A 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 25 OP1 U A 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 26 OP2 U A 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 27 O5' U A 42 4.853 -44.869 43.955 1.00 55.29 O
TER
ATOM 1 O3' A B 41 2.543 -45.062 43.075 1.00 56.85 O
ATOM 2 P U B 42 3.370 -44.343 44.239 1.00 56.44 P
ATOM 3 OP1 U B 42 2.919 -44.885 45.542 1.00 56.35 O
ATOM 4 OP2 U B 42 3.321 -42.882 44.000 1.00 56.30 O
ATOM 5 O5' U B 42 4.853 -44.869 43.955 1.00 55.29 O
ATOM 6 C5' U B 42 5.263 -46.161 44.388 1.00 53.77 C
ATOM 7 C4' U B 42 6.672 -46.470 43.920 1.00 52.62 C
ATOM 8 O4' U B 42 6.712 -46.472 42.471 1.00 52.48 O
ATOM 9 C3' U B 42 7.725 -45.442 44.296 1.00 52.03 C
ATOM 10 O3' U B 42 8.185 -45.636 45.614 1.00 51.61 O
ATOM 11 C2' U B 42 8.799 -45.727 43.257 1.00 52.10 C
ATOM 12 O2' U B 42 9.535 -46.904 43.523 1.00 52.62 O
ATOM 13 C1' U B 42 7.930 -45.902 42.014 1.00 51.92 C
ATOM 14 N1 U B 42 7.651 -44.608 41.284 1.00 51.27 N
ATOM 15 C2 U B 42 8.685 -43.917 40.671 1.00 50.95 C
ATOM 16 O2 U B 42 9.847 -44.287 40.673 1.00 50.84 O
ATOM 17 N3 U B 42 8.308 -42.751 40.045 1.00 50.73 N
ATOM 18 C4 U B 42 7.033 -42.215 39.967 1.00 50.72 C
ATOM 19 O4 U B 42 6.847 -41.164 39.368 1.00 50.74 O
ATOM 20 C5 U B 42 6.008 -42.983 40.623 1.00 51.01 C
ATOM 21 C6 U B 42 6.353 -44.120 41.239 1.00 51.28 C
ATOM 22 P C B 43 8.484 -44.358 46.528 1.00 51.37 P
ATOM 23 OP1 C B 43 8.852 -44.854 47.874 1.00 51.23 O
ATOM 24 OP2 C B 43 7.362 -43.398 46.393 1.00 51.24 O
ATOM 25 O5' C B 43 9.774 -43.728 45.819 1.00 50.47 O
TER
Atoms:
OP1: (-4.115,-44.166,43.158)
OP2: (-3.355,-46.612,43.023)
C3': (1.155,-44.806,42.922)
C1': (0.443,-46.254,41.203)
C5': (-0.785,-45.542,44.430)
O4': (-0.196,-46.697,42.382)
C8: (-1.773,-46.689,40.041)
O2': (1.771,-44.322,40.600)
C6: (-1.029,-46.955,36.612)
C5: (-1.176,-46.824,38.009)
C4: (-0.021,-46.586,38.734)
P: (-3.287,-45.282,43.675)
C4': (0.347,-45.961,43.510)
C2': (0.738,-44.778,41.453)
C2: (1.245,-46.604,36.917)
N1: (0.214,-46.839,36.090)
N3: (1.229,-46.466,38.246)
N6: (-2.052,-47.185,35.788)
N7: (-2.276,-46.888,38.844)
N9: (-0.419,-46.501,40.048)
O5': (-1.762,-44.799,43.704)
O3': (2.543,-45.062,43.075)
OP2: (-3.355,-46.612,43.023)
C3': (1.155,-44.806,42.922)
C1': (0.443,-46.254,41.203)
C5': (-0.785,-45.542,44.430)
O4': (-0.196,-46.697,42.382)
C8: (-1.773,-46.689,40.041)
O2': (1.771,-44.322,40.600)
C6: (-1.029,-46.955,36.612)
C5: (-1.176,-46.824,38.009)
C4: (-0.021,-46.586,38.734)
P: (-3.287,-45.282,43.675)
C4': (0.347,-45.961,43.510)
C2': (0.738,-44.778,41.453)
C2: (1.245,-46.604,36.917)
N1: (0.214,-46.839,36.090)
N3: (1.229,-46.466,38.246)
N6: (-2.052,-47.185,35.788)
N7: (-2.276,-46.888,38.844)
N9: (-0.419,-46.501,40.048)
O5': (-1.762,-44.799,43.704)
O3': (2.543,-45.062,43.075)
C4: (7.033,-42.215,39.967)
N3: (8.308,-42.751,40.045)
OP1: (2.919,-44.885,45.542)
OP2: (3.321,-42.882,44.000)
C2: (8.685,-43.917,40.671)
C1': (7.930,-45.902,42.014)
C3': (7.725,-45.442,44.296)
O5': (4.853,-44.869,43.955)
O4': (6.712,-46.472,42.471)
C5': (5.263,-46.161,44.388)
P: (3.370,-44.343,44.239)
C4': (6.672,-46.470,43.920)
C2': (8.799,-45.727,43.257)
O2': (9.535,-46.904,43.523)
N1: (7.651,-44.608,41.284)
O4: (6.847,-41.164,39.368)
O2: (9.847,-44.287,40.673)
C6: (6.353,-44.120,41.239)
C5: (6.008,-42.983,40.623)
O3': (8.185,-45.636,45.614)
N3: (8.308,-42.751,40.045)
OP1: (2.919,-44.885,45.542)
OP2: (3.321,-42.882,44.000)
C2: (8.685,-43.917,40.671)
C1': (7.930,-45.902,42.014)
C3': (7.725,-45.442,44.296)
O5': (4.853,-44.869,43.955)
O4': (6.712,-46.472,42.471)
C5': (5.263,-46.161,44.388)
P: (3.370,-44.343,44.239)
C4': (6.672,-46.470,43.920)
C2': (8.799,-45.727,43.257)
O2': (9.535,-46.904,43.523)
N1: (7.651,-44.608,41.284)
O4: (6.847,-41.164,39.368)
O2: (9.847,-44.287,40.673)
C6: (6.353,-44.120,41.239)
C5: (6.008,-42.983,40.623)
O3': (8.185,-45.636,45.614)
Image (generated by PyMOL):