Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2409:A2540
Extra
PDB:
ATOM 1 O3' A A2408 -57.007 60.877 164.710 1.00 66.83 O
ATOM 2 P G A2409 -55.748 61.832 164.941 1.00 95.27 P
ATOM 3 OP1 G A2409 -55.483 61.903 166.398 1.00152.16 O
ATOM 4 OP2 G A2409 -55.959 63.087 164.172 1.00151.99 O
ATOM 5 O5' G A2409 -54.573 61.019 164.247 1.00 37.18 O
ATOM 6 C5' G A2409 -54.150 59.743 164.770 1.00 37.18 C
ATOM 7 C4' G A2409 -52.982 59.229 163.974 1.00 37.18 C
ATOM 8 O4' G A2409 -53.434 58.868 162.644 1.00 37.18 O
ATOM 9 C3' G A2409 -51.905 60.273 163.757 1.00 37.18 C
ATOM 10 O3' G A2409 -50.997 60.309 164.848 1.00 37.18 O
ATOM 11 C2' G A2409 -51.278 59.850 162.434 1.00 37.18 C
ATOM 12 O2' G A2409 -50.297 58.846 162.597 1.00 37.18 O
ATOM 13 C1' G A2409 -52.489 59.290 161.679 1.00 37.18 C
ATOM 14 N9 G A2409 -53.171 60.243 160.804 1.00 69.41 N
ATOM 15 C8 G A2409 -54.331 60.936 161.087 1.00 69.50 C
ATOM 16 N7 G A2409 -54.745 61.676 160.096 1.00 69.57 N
ATOM 17 C5 G A2409 -53.800 61.471 159.099 1.00 69.57 C
ATOM 18 C6 G A2409 -53.734 61.992 157.783 1.00 69.51 C
ATOM 19 O6 G A2409 -54.542 62.738 157.208 1.00 69.45 O
ATOM 20 N1 G A2409 -52.594 61.546 157.116 1.00 69.53 N
ATOM 21 C2 G A2409 -51.651 60.694 157.644 1.00 69.58 C
ATOM 22 N2 G A2409 -50.610 60.398 156.850 1.00 69.57 N
ATOM 23 N3 G A2409 -51.719 60.176 158.861 1.00 69.61 N
ATOM 24 C4 G A2409 -52.809 60.606 159.528 1.00 69.56 C
ATOM 25 P A A2410 -50.388 61.715 165.324 1.00 76.89 P
ATOM 26 OP1 A A2410 -49.511 61.426 166.485 1.00107.07 O
ATOM 27 OP2 A A2410 -51.505 62.687 165.475 1.00106.98 O
ATOM 28 O5' A A2410 -49.482 62.163 164.087 1.00 50.08 O
TER
ATOM 1 O3' A B2539 -46.873 55.992 151.308 1.00 67.78 O
ATOM 2 P G B2540 -45.356 56.436 150.987 1.00 81.03 P
ATOM 3 OP1 G B2540 -45.239 56.731 149.534 1.00 94.31 O
ATOM 4 OP2 G B2540 -44.450 55.429 151.606 1.00 94.47 O
ATOM 5 O5' G B2540 -45.181 57.802 151.786 1.00 65.46 O
ATOM 6 C5' G B2540 -44.921 57.813 153.204 1.00 65.46 C
ATOM 7 C4' G B2540 -45.956 58.653 153.918 1.00 65.46 C
ATOM 8 O4' G B2540 -47.253 58.017 153.791 1.00 65.46 O
ATOM 9 C3' G B2540 -45.728 58.789 155.414 1.00 65.46 C
ATOM 10 O3' G B2540 -44.889 59.899 155.689 1.00 65.46 O
ATOM 11 C2' G B2540 -47.132 58.995 155.966 1.00 65.46 C
ATOM 12 O2' G B2540 -47.549 60.345 155.931 1.00 65.46 O
ATOM 13 C1' G B2540 -47.973 58.146 155.005 1.00 65.46 C
ATOM 14 N9 G B2540 -48.246 56.802 155.511 1.00 87.96 N
ATOM 15 C8 G B2540 -47.696 55.623 155.065 1.00 87.80 C
ATOM 16 N7 G B2540 -48.111 54.581 155.728 1.00 87.73 N
ATOM 17 C5 G B2540 -48.993 55.098 156.666 1.00 87.69 C
ATOM 18 C6 G B2540 -49.746 54.446 157.671 1.00 87.80 C
ATOM 19 O6 G B2540 -49.778 53.243 157.947 1.00 87.81 O
ATOM 20 N1 G B2540 -50.516 55.346 158.401 1.00 87.81 N
ATOM 21 C2 G B2540 -50.552 56.704 158.196 1.00 87.75 C
ATOM 22 N2 G B2540 -51.364 57.409 159.007 1.00 87.79 N
ATOM 23 N3 G B2540 -49.846 57.327 157.266 1.00 87.59 N
ATOM 24 C4 G B2540 -49.095 56.467 156.542 1.00 87.67 C
ATOM 25 P G B2541 -43.820 59.813 156.882 1.00 63.66 P
ATOM 26 OP1 G B2541 -43.325 61.193 157.133 1.00148.85 O
ATOM 27 OP2 G B2541 -42.850 58.736 156.561 1.00148.80 O
ATOM 28 O5' G B2541 -44.694 59.363 158.128 1.00 64.93 O
TER
ATOM 2 P G A2409 -55.748 61.832 164.941 1.00 95.27 P
ATOM 3 OP1 G A2409 -55.483 61.903 166.398 1.00152.16 O
ATOM 4 OP2 G A2409 -55.959 63.087 164.172 1.00151.99 O
ATOM 5 O5' G A2409 -54.573 61.019 164.247 1.00 37.18 O
ATOM 6 C5' G A2409 -54.150 59.743 164.770 1.00 37.18 C
ATOM 7 C4' G A2409 -52.982 59.229 163.974 1.00 37.18 C
ATOM 8 O4' G A2409 -53.434 58.868 162.644 1.00 37.18 O
ATOM 9 C3' G A2409 -51.905 60.273 163.757 1.00 37.18 C
ATOM 10 O3' G A2409 -50.997 60.309 164.848 1.00 37.18 O
ATOM 11 C2' G A2409 -51.278 59.850 162.434 1.00 37.18 C
ATOM 12 O2' G A2409 -50.297 58.846 162.597 1.00 37.18 O
ATOM 13 C1' G A2409 -52.489 59.290 161.679 1.00 37.18 C
ATOM 14 N9 G A2409 -53.171 60.243 160.804 1.00 69.41 N
ATOM 15 C8 G A2409 -54.331 60.936 161.087 1.00 69.50 C
ATOM 16 N7 G A2409 -54.745 61.676 160.096 1.00 69.57 N
ATOM 17 C5 G A2409 -53.800 61.471 159.099 1.00 69.57 C
ATOM 18 C6 G A2409 -53.734 61.992 157.783 1.00 69.51 C
ATOM 19 O6 G A2409 -54.542 62.738 157.208 1.00 69.45 O
ATOM 20 N1 G A2409 -52.594 61.546 157.116 1.00 69.53 N
ATOM 21 C2 G A2409 -51.651 60.694 157.644 1.00 69.58 C
ATOM 22 N2 G A2409 -50.610 60.398 156.850 1.00 69.57 N
ATOM 23 N3 G A2409 -51.719 60.176 158.861 1.00 69.61 N
ATOM 24 C4 G A2409 -52.809 60.606 159.528 1.00 69.56 C
ATOM 25 P A A2410 -50.388 61.715 165.324 1.00 76.89 P
ATOM 26 OP1 A A2410 -49.511 61.426 166.485 1.00107.07 O
ATOM 27 OP2 A A2410 -51.505 62.687 165.475 1.00106.98 O
ATOM 28 O5' A A2410 -49.482 62.163 164.087 1.00 50.08 O
TER
ATOM 1 O3' A B2539 -46.873 55.992 151.308 1.00 67.78 O
ATOM 2 P G B2540 -45.356 56.436 150.987 1.00 81.03 P
ATOM 3 OP1 G B2540 -45.239 56.731 149.534 1.00 94.31 O
ATOM 4 OP2 G B2540 -44.450 55.429 151.606 1.00 94.47 O
ATOM 5 O5' G B2540 -45.181 57.802 151.786 1.00 65.46 O
ATOM 6 C5' G B2540 -44.921 57.813 153.204 1.00 65.46 C
ATOM 7 C4' G B2540 -45.956 58.653 153.918 1.00 65.46 C
ATOM 8 O4' G B2540 -47.253 58.017 153.791 1.00 65.46 O
ATOM 9 C3' G B2540 -45.728 58.789 155.414 1.00 65.46 C
ATOM 10 O3' G B2540 -44.889 59.899 155.689 1.00 65.46 O
ATOM 11 C2' G B2540 -47.132 58.995 155.966 1.00 65.46 C
ATOM 12 O2' G B2540 -47.549 60.345 155.931 1.00 65.46 O
ATOM 13 C1' G B2540 -47.973 58.146 155.005 1.00 65.46 C
ATOM 14 N9 G B2540 -48.246 56.802 155.511 1.00 87.96 N
ATOM 15 C8 G B2540 -47.696 55.623 155.065 1.00 87.80 C
ATOM 16 N7 G B2540 -48.111 54.581 155.728 1.00 87.73 N
ATOM 17 C5 G B2540 -48.993 55.098 156.666 1.00 87.69 C
ATOM 18 C6 G B2540 -49.746 54.446 157.671 1.00 87.80 C
ATOM 19 O6 G B2540 -49.778 53.243 157.947 1.00 87.81 O
ATOM 20 N1 G B2540 -50.516 55.346 158.401 1.00 87.81 N
ATOM 21 C2 G B2540 -50.552 56.704 158.196 1.00 87.75 C
ATOM 22 N2 G B2540 -51.364 57.409 159.007 1.00 87.79 N
ATOM 23 N3 G B2540 -49.846 57.327 157.266 1.00 87.59 N
ATOM 24 C4 G B2540 -49.095 56.467 156.542 1.00 87.67 C
ATOM 25 P G B2541 -43.820 59.813 156.882 1.00 63.66 P
ATOM 26 OP1 G B2541 -43.325 61.193 157.133 1.00148.85 O
ATOM 27 OP2 G B2541 -42.850 58.736 156.561 1.00148.80 O
ATOM 28 O5' G B2541 -44.694 59.363 158.128 1.00 64.93 O
TER
Atoms:
OP1: (-55.483,61.903,166.398)
OP2: (-55.959,63.087,164.172)
C3': (-51.905,60.273,163.757)
C1': (-52.489,59.290,161.679)
C5': (-54.150,59.743,164.770)
O6: (-54.542,62.738,157.208)
O4': (-53.434,58.868,162.644)
C8: (-54.331,60.936,161.087)
C2: (-51.651,60.694,157.644)
C6: (-53.734,61.992,157.783)
C5: (-53.800,61.471,159.099)
C4: (-52.809,60.606,159.528)
P: (-55.748,61.832,164.941)
C4': (-52.982,59.229,163.974)
C2': (-51.278,59.850,162.434)
O2': (-50.297,58.846,162.597)
N1: (-52.594,61.546,157.116)
N2: (-50.610,60.398,156.850)
N3: (-51.719,60.176,158.861)
N7: (-54.745,61.676,160.096)
N9: (-53.171,60.243,160.804)
O5': (-54.573,61.019,164.247)
O3': (-50.997,60.309,164.848)
OP2: (-55.959,63.087,164.172)
C3': (-51.905,60.273,163.757)
C1': (-52.489,59.290,161.679)
C5': (-54.150,59.743,164.770)
O6: (-54.542,62.738,157.208)
O4': (-53.434,58.868,162.644)
C8: (-54.331,60.936,161.087)
C2: (-51.651,60.694,157.644)
C6: (-53.734,61.992,157.783)
C5: (-53.800,61.471,159.099)
C4: (-52.809,60.606,159.528)
P: (-55.748,61.832,164.941)
C4': (-52.982,59.229,163.974)
C2': (-51.278,59.850,162.434)
O2': (-50.297,58.846,162.597)
N1: (-52.594,61.546,157.116)
N2: (-50.610,60.398,156.850)
N3: (-51.719,60.176,158.861)
N7: (-54.745,61.676,160.096)
N9: (-53.171,60.243,160.804)
O5': (-54.573,61.019,164.247)
O3': (-50.997,60.309,164.848)
OP1: (-45.239,56.731,149.534)
OP2: (-44.450,55.429,151.606)
C3': (-45.728,58.789,155.414)
C1': (-47.973,58.146,155.005)
C5': (-44.921,57.813,153.204)
O6: (-49.778,53.243,157.947)
O4': (-47.253,58.017,153.791)
C8: (-47.696,55.623,155.065)
C2: (-50.552,56.704,158.196)
C6: (-49.746,54.446,157.671)
C5: (-48.993,55.098,156.666)
C4: (-49.095,56.467,156.542)
P: (-45.356,56.436,150.987)
C4': (-45.956,58.653,153.918)
C2': (-47.132,58.995,155.966)
O2': (-47.549,60.345,155.931)
N1: (-50.516,55.346,158.401)
N2: (-51.364,57.409,159.007)
N3: (-49.846,57.327,157.266)
N7: (-48.111,54.581,155.728)
N9: (-48.246,56.802,155.511)
O5': (-45.181,57.802,151.786)
O3': (-44.889,59.899,155.689)
OP2: (-44.450,55.429,151.606)
C3': (-45.728,58.789,155.414)
C1': (-47.973,58.146,155.005)
C5': (-44.921,57.813,153.204)
O6: (-49.778,53.243,157.947)
O4': (-47.253,58.017,153.791)
C8: (-47.696,55.623,155.065)
C2: (-50.552,56.704,158.196)
C6: (-49.746,54.446,157.671)
C5: (-48.993,55.098,156.666)
C4: (-49.095,56.467,156.542)
P: (-45.356,56.436,150.987)
C4': (-45.956,58.653,153.918)
C2': (-47.132,58.995,155.966)
O2': (-47.549,60.345,155.931)
N1: (-50.516,55.346,158.401)
N2: (-51.364,57.409,159.007)
N3: (-49.846,57.327,157.266)
N7: (-48.111,54.581,155.728)
N9: (-48.246,56.802,155.511)
O5': (-45.181,57.802,151.786)
O3': (-44.889,59.899,155.689)
Image (generated by PyMOL):