Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2409:A2540
Extra
PDB:
ATOM 1 O3' A A2408 -110.967 -50.397 -53.252 1.00 54.70 O
ATOM 2 P G A2409 -109.711 -50.678 -52.299 1.00 59.48 P
ATOM 3 OP1 G A2409 -109.472 -52.141 -52.269 1.00116.37 O
ATOM 4 OP2 G A2409 -109.920 -49.942 -51.027 1.00116.20 O
ATOM 5 O5' G A2409 -108.514 -49.990 -53.083 1.00 25.94 O
ATOM 6 C5' G A2409 -108.109 -50.474 -54.374 1.00 25.94 C
ATOM 7 C4' G A2409 -106.927 -49.687 -54.859 1.00 25.94 C
ATOM 8 O4' G A2409 -107.358 -48.348 -55.175 1.00 25.94 O
ATOM 9 C3' G A2409 -105.869 -49.517 -53.796 1.00 25.94 C
ATOM 10 O3' G A2409 -104.967 -50.600 -53.814 1.00 25.94 O
ATOM 11 C2' G A2409 -105.219 -48.196 -54.158 1.00 25.94 C
ATOM 12 O2' G A2409 -104.246 -48.367 -55.161 1.00 25.94 O
ATOM 13 C1' G A2409 -106.407 -47.414 -54.715 1.00 25.94 C
ATOM 14 N9 G A2409 -107.086 -46.551 -53.752 1.00 46.38 N
ATOM 15 C8 G A2409 -108.253 -46.833 -53.082 1.00 46.47 C
ATOM 16 N7 G A2409 -108.660 -45.852 -52.328 1.00 46.54 N
ATOM 17 C5 G A2409 -107.700 -44.864 -52.498 1.00 46.54 C
ATOM 18 C6 G A2409 -107.618 -43.567 -51.945 1.00 46.48 C
ATOM 19 O6 G A2409 -108.422 -42.997 -51.191 1.00 46.42 O
ATOM 20 N1 G A2409 -106.465 -42.906 -52.361 1.00 46.50 N
ATOM 21 C2 G A2409 -105.526 -43.421 -53.217 1.00 46.55 C
ATOM 22 N2 G A2409 -104.475 -42.636 -53.486 1.00 46.54 N
ATOM 23 N3 G A2409 -105.607 -44.620 -53.764 1.00 46.58 N
ATOM 24 C4 G A2409 -106.711 -45.285 -53.360 1.00 46.53 C
ATOM 25 P A A2410 -104.365 -51.131 -52.431 1.00 25.87 P
ATOM 26 OP1 A A2410 -103.500 -52.295 -52.744 1.00 56.05 O
ATOM 27 OP2 A A2410 -105.496 -51.280 -51.471 1.00 55.96 O
ATOM 28 O5' A A2410 -103.442 -49.933 -51.940 1.00 40.25 O
TER
ATOM 1 O3' A B2539 -100.665 -37.000 -57.734 1.00106.41 O
ATOM 2 P G B2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 3 OP1 G B2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 4 OP2 G B2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 5 O5' G B2540 -98.982 -37.566 -55.939 1.00 66.68 O
ATOM 6 C5' G B2540 -98.748 -38.987 -55.969 1.00 66.68 C
ATOM 7 C4' G B2540 -99.790 -39.706 -55.140 1.00 66.68 C
ATOM 8 O4' G B2540 -101.088 -39.549 -55.767 1.00 66.68 O
ATOM 9 C3' G B2540 -99.579 -41.206 -55.038 1.00 66.68 C
ATOM 10 O3' G B2540 -98.745 -41.514 -53.932 1.00 66.68 O
ATOM 11 C2' G B2540 -100.988 -41.750 -54.851 1.00 66.68 C
ATOM 12 O2' G B2540 -101.401 -41.740 -53.499 1.00 66.68 O
ATOM 13 C1' G B2540 -101.817 -40.761 -55.679 1.00 66.68 C
ATOM 14 N9 G B2540 -102.085 -41.227 -57.039 1.00 72.23 N
ATOM 15 C8 G B2540 -101.520 -40.758 -58.199 1.00 72.07 C
ATOM 16 N7 G B2540 -101.943 -41.379 -59.262 1.00 72.00 N
ATOM 17 C5 G B2540 -102.844 -42.312 -58.779 1.00 71.96 C
ATOM 18 C6 G B2540 -103.615 -43.274 -59.467 1.00 72.07 C
ATOM 19 O6 G B2540 -103.659 -43.497 -60.681 1.00 72.08 O
ATOM 20 N1 G B2540 -104.398 -44.022 -58.593 1.00 72.08 N
ATOM 21 C2 G B2540 -104.435 -43.861 -57.229 1.00 72.02 C
ATOM 22 N2 G B2540 -105.259 -44.677 -56.553 1.00 72.06 N
ATOM 23 N3 G B2540 -103.716 -42.963 -56.575 1.00 71.86 N
ATOM 24 C4 G B2540 -102.948 -42.229 -57.408 1.00 71.94 C
ATOM 25 P G B2541 -97.683 -42.703 -54.058 1.00 45.10 P
ATOM 26 OP1 G B2541 -97.195 -43.002 -52.688 1.00130.29 O
ATOM 27 OP2 G B2541 -96.708 -42.373 -55.128 1.00130.24 O
ATOM 28 O5' G B2541 -98.575 -43.931 -54.550 1.00 48.29 O
TER
ATOM 2 P G A2409 -109.711 -50.678 -52.299 1.00 59.48 P
ATOM 3 OP1 G A2409 -109.472 -52.141 -52.269 1.00116.37 O
ATOM 4 OP2 G A2409 -109.920 -49.942 -51.027 1.00116.20 O
ATOM 5 O5' G A2409 -108.514 -49.990 -53.083 1.00 25.94 O
ATOM 6 C5' G A2409 -108.109 -50.474 -54.374 1.00 25.94 C
ATOM 7 C4' G A2409 -106.927 -49.687 -54.859 1.00 25.94 C
ATOM 8 O4' G A2409 -107.358 -48.348 -55.175 1.00 25.94 O
ATOM 9 C3' G A2409 -105.869 -49.517 -53.796 1.00 25.94 C
ATOM 10 O3' G A2409 -104.967 -50.600 -53.814 1.00 25.94 O
ATOM 11 C2' G A2409 -105.219 -48.196 -54.158 1.00 25.94 C
ATOM 12 O2' G A2409 -104.246 -48.367 -55.161 1.00 25.94 O
ATOM 13 C1' G A2409 -106.407 -47.414 -54.715 1.00 25.94 C
ATOM 14 N9 G A2409 -107.086 -46.551 -53.752 1.00 46.38 N
ATOM 15 C8 G A2409 -108.253 -46.833 -53.082 1.00 46.47 C
ATOM 16 N7 G A2409 -108.660 -45.852 -52.328 1.00 46.54 N
ATOM 17 C5 G A2409 -107.700 -44.864 -52.498 1.00 46.54 C
ATOM 18 C6 G A2409 -107.618 -43.567 -51.945 1.00 46.48 C
ATOM 19 O6 G A2409 -108.422 -42.997 -51.191 1.00 46.42 O
ATOM 20 N1 G A2409 -106.465 -42.906 -52.361 1.00 46.50 N
ATOM 21 C2 G A2409 -105.526 -43.421 -53.217 1.00 46.55 C
ATOM 22 N2 G A2409 -104.475 -42.636 -53.486 1.00 46.54 N
ATOM 23 N3 G A2409 -105.607 -44.620 -53.764 1.00 46.58 N
ATOM 24 C4 G A2409 -106.711 -45.285 -53.360 1.00 46.53 C
ATOM 25 P A A2410 -104.365 -51.131 -52.431 1.00 25.87 P
ATOM 26 OP1 A A2410 -103.500 -52.295 -52.744 1.00 56.05 O
ATOM 27 OP2 A A2410 -105.496 -51.280 -51.471 1.00 55.96 O
ATOM 28 O5' A A2410 -103.442 -49.933 -51.940 1.00 40.25 O
TER
ATOM 1 O3' A B2539 -100.665 -37.000 -57.734 1.00106.41 O
ATOM 2 P G B2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 3 OP1 G B2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 4 OP2 G B2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 5 O5' G B2540 -98.982 -37.566 -55.939 1.00 66.68 O
ATOM 6 C5' G B2540 -98.748 -38.987 -55.969 1.00 66.68 C
ATOM 7 C4' G B2540 -99.790 -39.706 -55.140 1.00 66.68 C
ATOM 8 O4' G B2540 -101.088 -39.549 -55.767 1.00 66.68 O
ATOM 9 C3' G B2540 -99.579 -41.206 -55.038 1.00 66.68 C
ATOM 10 O3' G B2540 -98.745 -41.514 -53.932 1.00 66.68 O
ATOM 11 C2' G B2540 -100.988 -41.750 -54.851 1.00 66.68 C
ATOM 12 O2' G B2540 -101.401 -41.740 -53.499 1.00 66.68 O
ATOM 13 C1' G B2540 -101.817 -40.761 -55.679 1.00 66.68 C
ATOM 14 N9 G B2540 -102.085 -41.227 -57.039 1.00 72.23 N
ATOM 15 C8 G B2540 -101.520 -40.758 -58.199 1.00 72.07 C
ATOM 16 N7 G B2540 -101.943 -41.379 -59.262 1.00 72.00 N
ATOM 17 C5 G B2540 -102.844 -42.312 -58.779 1.00 71.96 C
ATOM 18 C6 G B2540 -103.615 -43.274 -59.467 1.00 72.07 C
ATOM 19 O6 G B2540 -103.659 -43.497 -60.681 1.00 72.08 O
ATOM 20 N1 G B2540 -104.398 -44.022 -58.593 1.00 72.08 N
ATOM 21 C2 G B2540 -104.435 -43.861 -57.229 1.00 72.02 C
ATOM 22 N2 G B2540 -105.259 -44.677 -56.553 1.00 72.06 N
ATOM 23 N3 G B2540 -103.716 -42.963 -56.575 1.00 71.86 N
ATOM 24 C4 G B2540 -102.948 -42.229 -57.408 1.00 71.94 C
ATOM 25 P G B2541 -97.683 -42.703 -54.058 1.00 45.10 P
ATOM 26 OP1 G B2541 -97.195 -43.002 -52.688 1.00130.29 O
ATOM 27 OP2 G B2541 -96.708 -42.373 -55.128 1.00130.24 O
ATOM 28 O5' G B2541 -98.575 -43.931 -54.550 1.00 48.29 O
TER
Atoms:
OP1: (-109.472,-52.141,-52.269)
OP2: (-109.920,-49.942,-51.027)
C3': (-105.869,-49.517,-53.796)
C1': (-106.407,-47.414,-54.715)
C5': (-108.109,-50.474,-54.374)
O6: (-108.422,-42.997,-51.191)
O4': (-107.358,-48.348,-55.175)
C8: (-108.253,-46.833,-53.082)
C2: (-105.526,-43.421,-53.217)
C6: (-107.618,-43.567,-51.945)
C5: (-107.700,-44.864,-52.498)
C4: (-106.711,-45.285,-53.360)
P: (-109.711,-50.678,-52.299)
C4': (-106.927,-49.687,-54.859)
C2': (-105.219,-48.196,-54.158)
O2': (-104.246,-48.367,-55.161)
N1: (-106.465,-42.906,-52.361)
N2: (-104.475,-42.636,-53.486)
N3: (-105.607,-44.620,-53.764)
N7: (-108.660,-45.852,-52.328)
N9: (-107.086,-46.551,-53.752)
O5': (-108.514,-49.990,-53.083)
O3': (-104.967,-50.600,-53.814)
OP2: (-109.920,-49.942,-51.027)
C3': (-105.869,-49.517,-53.796)
C1': (-106.407,-47.414,-54.715)
C5': (-108.109,-50.474,-54.374)
O6: (-108.422,-42.997,-51.191)
O4': (-107.358,-48.348,-55.175)
C8: (-108.253,-46.833,-53.082)
C2: (-105.526,-43.421,-53.217)
C6: (-107.618,-43.567,-51.945)
C5: (-107.700,-44.864,-52.498)
C4: (-106.711,-45.285,-53.360)
P: (-109.711,-50.678,-52.299)
C4': (-106.927,-49.687,-54.859)
C2': (-105.219,-48.196,-54.158)
O2': (-104.246,-48.367,-55.161)
N1: (-106.465,-42.906,-52.361)
N2: (-104.475,-42.636,-53.486)
N3: (-105.607,-44.620,-53.764)
N7: (-108.660,-45.852,-52.328)
N9: (-107.086,-46.551,-53.752)
O5': (-108.514,-49.990,-53.083)
O3': (-104.967,-50.600,-53.814)
OP1: (-99.008,-35.292,-56.941)
OP2: (-98.245,-37.324,-58.305)
C3': (-99.579,-41.206,-55.038)
C1': (-101.817,-40.761,-55.679)
C5': (-98.748,-38.987,-55.969)
O6: (-103.659,-43.497,-60.681)
O4': (-101.088,-39.549,-55.767)
C8: (-101.520,-40.758,-58.199)
C2: (-104.435,-43.861,-57.229)
C6: (-103.615,-43.274,-59.467)
C5: (-102.844,-42.312,-58.779)
C4: (-102.948,-42.229,-57.408)
P: (-99.143,-36.727,-57.281)
C4': (-99.790,-39.706,-55.140)
C2': (-100.988,-41.750,-54.851)
O2': (-101.401,-41.740,-53.499)
N1: (-104.398,-44.022,-58.593)
N2: (-105.259,-44.677,-56.553)
N3: (-103.716,-42.963,-56.575)
N7: (-101.943,-41.379,-59.262)
N9: (-102.085,-41.227,-57.039)
O5': (-98.982,-37.566,-55.939)
O3': (-98.745,-41.514,-53.932)
OP2: (-98.245,-37.324,-58.305)
C3': (-99.579,-41.206,-55.038)
C1': (-101.817,-40.761,-55.679)
C5': (-98.748,-38.987,-55.969)
O6: (-103.659,-43.497,-60.681)
O4': (-101.088,-39.549,-55.767)
C8: (-101.520,-40.758,-58.199)
C2: (-104.435,-43.861,-57.229)
C6: (-103.615,-43.274,-59.467)
C5: (-102.844,-42.312,-58.779)
C4: (-102.948,-42.229,-57.408)
P: (-99.143,-36.727,-57.281)
C4': (-99.790,-39.706,-55.140)
C2': (-100.988,-41.750,-54.851)
O2': (-101.401,-41.740,-53.499)
N1: (-104.398,-44.022,-58.593)
N2: (-105.259,-44.677,-56.553)
N3: (-103.716,-42.963,-56.575)
N7: (-101.943,-41.379,-59.262)
N9: (-102.085,-41.227,-57.039)
O5': (-98.982,-37.566,-55.939)
O3': (-98.745,-41.514,-53.932)
Image (generated by PyMOL):