Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A107:A108
Extra
PDB:
ATOM 1 O3' G A 106 -9.054 36.090 119.319 1.00 8.93 O
ATOM 2 P A A 107 -9.606 37.603 119.396 1.00 11.45 P
ATOM 3 OP1 A A 107 -9.762 37.942 120.828 1.00 11.45 O
ATOM 4 OP2 A A 107 -10.812 37.668 118.523 1.00 11.45 O
ATOM 5 O5' A A 107 -8.402 38.461 118.776 1.00 11.45 O
ATOM 6 C5' A A 107 -7.656 38.011 117.650 1.00 11.45 C
ATOM 7 C4' A A 107 -6.921 39.152 117.002 1.00 11.45 C
ATOM 8 O4' A A 107 -6.002 39.711 117.966 1.00 11.45 O
ATOM 9 C3' A A 107 -6.081 38.801 115.764 1.00 11.45 C
ATOM 10 O3' A A 107 -6.162 39.856 114.808 1.00 11.45 O
ATOM 11 C2' A A 107 -4.651 38.756 116.317 1.00 11.45 C
ATOM 12 O2' A A 107 -3.617 39.022 115.362 1.00 11.45 O
ATOM 13 C1' A A 107 -4.720 39.837 117.378 1.00 11.45 C
ATOM 14 N9 A A 107 -3.714 39.710 118.426 1.00 11.72 N
ATOM 15 C8 A A 107 -2.599 40.472 118.680 1.00 11.72 C
ATOM 16 N7 A A 107 -1.918 40.076 119.725 1.00 11.72 N
ATOM 17 C5 A A 107 -2.636 38.987 120.166 1.00 11.72 C
ATOM 18 C6 A A 107 -2.435 38.129 121.228 1.00 11.72 C
ATOM 19 N6 A A 107 -1.423 38.210 122.090 1.00 11.72 N
ATOM 20 N1 A A 107 -3.357 37.156 121.355 1.00 11.72 N
ATOM 21 C2 A A 107 -4.390 37.047 120.499 1.00 11.72 C
ATOM 22 N3 A A 107 -4.697 37.792 119.454 1.00 11.72 N
ATOM 23 C4 A A 107 -3.750 38.744 119.372 1.00 11.72 C
ATOM 24 P C A 108 -7.515 40.156 114.018 1.00 4.51 P
ATOM 25 OP1 C A 108 -7.206 41.236 113.030 1.00 4.51 O
ATOM 26 OP2 C A 108 -8.577 40.368 115.025 1.00 4.51 O
ATOM 27 O5' C A 108 -7.801 38.813 113.257 1.00 4.51 O
TER
ATOM 1 O3' A B 107 -6.162 39.856 114.808 1.00 11.45 O
ATOM 2 P C B 108 -7.515 40.156 114.018 1.00 4.51 P
ATOM 3 OP1 C B 108 -7.206 41.236 113.030 1.00 4.51 O
ATOM 4 OP2 C B 108 -8.577 40.368 115.025 1.00 4.51 O
ATOM 5 O5' C B 108 -7.801 38.813 113.257 1.00 4.51 O
ATOM 6 C5' C B 108 -6.862 38.260 112.360 1.00 4.51 C
ATOM 7 C4' C B 108 -7.242 36.855 112.035 1.00 4.51 C
ATOM 8 O4' C B 108 -7.386 36.097 113.265 1.00 4.51 O
ATOM 9 C3' C B 108 -8.593 36.695 111.388 1.00 4.51 C
ATOM 10 O3' C B 108 -8.594 37.024 110.023 1.00 4.51 O
ATOM 11 C2' C B 108 -8.908 35.242 111.669 1.00 4.51 C
ATOM 12 O2' C B 108 -8.190 34.384 110.798 1.00 4.51 O
ATOM 13 C1' C B 108 -8.343 35.081 113.070 1.00 4.51 C
ATOM 14 N1 C B 108 -9.393 35.167 114.094 1.00 5.01 N
ATOM 15 C2 C B 108 -10.365 34.191 113.913 1.00 5.01 C
ATOM 16 O2 C B 108 -10.234 33.417 112.923 1.00 5.01 O
ATOM 17 N3 C B 108 -11.414 34.097 114.779 1.00 5.01 N
ATOM 18 C4 C B 108 -11.510 34.914 115.815 1.00 5.01 C
ATOM 19 N4 C B 108 -12.569 34.737 116.631 1.00 5.01 N
ATOM 20 C5 C B 108 -10.503 35.910 116.028 1.00 5.01 C
ATOM 21 C6 C B 108 -9.477 36.005 115.155 1.00 5.01 C
ATOM 22 P G B 109 -9.618 38.120 109.473 1.00 12.59 P
ATOM 23 OP1 G B 109 -9.069 38.598 108.185 1.00 12.59 O
ATOM 24 OP2 G B 109 -9.845 39.101 110.561 1.00 12.59 O
ATOM 25 O5' G B 109 -10.948 37.297 109.234 1.00 12.59 O
TER
ATOM 2 P A A 107 -9.606 37.603 119.396 1.00 11.45 P
ATOM 3 OP1 A A 107 -9.762 37.942 120.828 1.00 11.45 O
ATOM 4 OP2 A A 107 -10.812 37.668 118.523 1.00 11.45 O
ATOM 5 O5' A A 107 -8.402 38.461 118.776 1.00 11.45 O
ATOM 6 C5' A A 107 -7.656 38.011 117.650 1.00 11.45 C
ATOM 7 C4' A A 107 -6.921 39.152 117.002 1.00 11.45 C
ATOM 8 O4' A A 107 -6.002 39.711 117.966 1.00 11.45 O
ATOM 9 C3' A A 107 -6.081 38.801 115.764 1.00 11.45 C
ATOM 10 O3' A A 107 -6.162 39.856 114.808 1.00 11.45 O
ATOM 11 C2' A A 107 -4.651 38.756 116.317 1.00 11.45 C
ATOM 12 O2' A A 107 -3.617 39.022 115.362 1.00 11.45 O
ATOM 13 C1' A A 107 -4.720 39.837 117.378 1.00 11.45 C
ATOM 14 N9 A A 107 -3.714 39.710 118.426 1.00 11.72 N
ATOM 15 C8 A A 107 -2.599 40.472 118.680 1.00 11.72 C
ATOM 16 N7 A A 107 -1.918 40.076 119.725 1.00 11.72 N
ATOM 17 C5 A A 107 -2.636 38.987 120.166 1.00 11.72 C
ATOM 18 C6 A A 107 -2.435 38.129 121.228 1.00 11.72 C
ATOM 19 N6 A A 107 -1.423 38.210 122.090 1.00 11.72 N
ATOM 20 N1 A A 107 -3.357 37.156 121.355 1.00 11.72 N
ATOM 21 C2 A A 107 -4.390 37.047 120.499 1.00 11.72 C
ATOM 22 N3 A A 107 -4.697 37.792 119.454 1.00 11.72 N
ATOM 23 C4 A A 107 -3.750 38.744 119.372 1.00 11.72 C
ATOM 24 P C A 108 -7.515 40.156 114.018 1.00 4.51 P
ATOM 25 OP1 C A 108 -7.206 41.236 113.030 1.00 4.51 O
ATOM 26 OP2 C A 108 -8.577 40.368 115.025 1.00 4.51 O
ATOM 27 O5' C A 108 -7.801 38.813 113.257 1.00 4.51 O
TER
ATOM 1 O3' A B 107 -6.162 39.856 114.808 1.00 11.45 O
ATOM 2 P C B 108 -7.515 40.156 114.018 1.00 4.51 P
ATOM 3 OP1 C B 108 -7.206 41.236 113.030 1.00 4.51 O
ATOM 4 OP2 C B 108 -8.577 40.368 115.025 1.00 4.51 O
ATOM 5 O5' C B 108 -7.801 38.813 113.257 1.00 4.51 O
ATOM 6 C5' C B 108 -6.862 38.260 112.360 1.00 4.51 C
ATOM 7 C4' C B 108 -7.242 36.855 112.035 1.00 4.51 C
ATOM 8 O4' C B 108 -7.386 36.097 113.265 1.00 4.51 O
ATOM 9 C3' C B 108 -8.593 36.695 111.388 1.00 4.51 C
ATOM 10 O3' C B 108 -8.594 37.024 110.023 1.00 4.51 O
ATOM 11 C2' C B 108 -8.908 35.242 111.669 1.00 4.51 C
ATOM 12 O2' C B 108 -8.190 34.384 110.798 1.00 4.51 O
ATOM 13 C1' C B 108 -8.343 35.081 113.070 1.00 4.51 C
ATOM 14 N1 C B 108 -9.393 35.167 114.094 1.00 5.01 N
ATOM 15 C2 C B 108 -10.365 34.191 113.913 1.00 5.01 C
ATOM 16 O2 C B 108 -10.234 33.417 112.923 1.00 5.01 O
ATOM 17 N3 C B 108 -11.414 34.097 114.779 1.00 5.01 N
ATOM 18 C4 C B 108 -11.510 34.914 115.815 1.00 5.01 C
ATOM 19 N4 C B 108 -12.569 34.737 116.631 1.00 5.01 N
ATOM 20 C5 C B 108 -10.503 35.910 116.028 1.00 5.01 C
ATOM 21 C6 C B 108 -9.477 36.005 115.155 1.00 5.01 C
ATOM 22 P G B 109 -9.618 38.120 109.473 1.00 12.59 P
ATOM 23 OP1 G B 109 -9.069 38.598 108.185 1.00 12.59 O
ATOM 24 OP2 G B 109 -9.845 39.101 110.561 1.00 12.59 O
ATOM 25 O5' G B 109 -10.948 37.297 109.234 1.00 12.59 O
TER
Atoms:
OP1: (-9.762,37.942,120.828)
OP2: (-10.812,37.668,118.523)
C3': (-6.081,38.801,115.764)
C1': (-4.720,39.837,117.378)
C5': (-7.656,38.011,117.650)
O4': (-6.002,39.711,117.966)
C8: (-2.599,40.472,118.680)
O2': (-3.617,39.022,115.362)
C6: (-2.435,38.129,121.228)
C5: (-2.636,38.987,120.166)
C4: (-3.750,38.744,119.372)
P: (-9.606,37.603,119.396)
C4': (-6.921,39.152,117.002)
C2': (-4.651,38.756,116.317)
C2: (-4.390,37.047,120.499)
N1: (-3.357,37.156,121.355)
N3: (-4.697,37.792,119.454)
N6: (-1.423,38.210,122.090)
N7: (-1.918,40.076,119.725)
N9: (-3.714,39.710,118.426)
O5': (-8.402,38.461,118.776)
O3': (-6.162,39.856,114.808)
OP2: (-10.812,37.668,118.523)
C3': (-6.081,38.801,115.764)
C1': (-4.720,39.837,117.378)
C5': (-7.656,38.011,117.650)
O4': (-6.002,39.711,117.966)
C8: (-2.599,40.472,118.680)
O2': (-3.617,39.022,115.362)
C6: (-2.435,38.129,121.228)
C5: (-2.636,38.987,120.166)
C4: (-3.750,38.744,119.372)
P: (-9.606,37.603,119.396)
C4': (-6.921,39.152,117.002)
C2': (-4.651,38.756,116.317)
C2: (-4.390,37.047,120.499)
N1: (-3.357,37.156,121.355)
N3: (-4.697,37.792,119.454)
N6: (-1.423,38.210,122.090)
N7: (-1.918,40.076,119.725)
N9: (-3.714,39.710,118.426)
O5': (-8.402,38.461,118.776)
O3': (-6.162,39.856,114.808)
C2: (-10.365,34.191,113.913)
OP1: (-7.206,41.236,113.030)
OP2: (-8.577,40.368,115.025)
C4: (-11.510,34.914,115.815)
O5': (-7.801,38.813,113.257)
C3': (-8.593,36.695,111.388)
C1': (-8.343,35.081,113.070)
O4': (-7.386,36.097,113.265)
C5': (-6.862,38.260,112.360)
P: (-7.515,40.156,114.018)
O2: (-10.234,33.417,112.923)
C4': (-7.242,36.855,112.035)
C2': (-8.908,35.242,111.669)
O2': (-8.190,34.384,110.798)
N1: (-9.393,35.167,114.094)
N3: (-11.414,34.097,114.779)
N4: (-12.569,34.737,116.631)
C6: (-9.477,36.005,115.155)
C5: (-10.503,35.910,116.028)
O3': (-8.594,37.024,110.023)
OP1: (-7.206,41.236,113.030)
OP2: (-8.577,40.368,115.025)
C4: (-11.510,34.914,115.815)
O5': (-7.801,38.813,113.257)
C3': (-8.593,36.695,111.388)
C1': (-8.343,35.081,113.070)
O4': (-7.386,36.097,113.265)
C5': (-6.862,38.260,112.360)
P: (-7.515,40.156,114.018)
O2: (-10.234,33.417,112.923)
C4': (-7.242,36.855,112.035)
C2': (-8.908,35.242,111.669)
O2': (-8.190,34.384,110.798)
N1: (-9.393,35.167,114.094)
N3: (-11.414,34.097,114.779)
N4: (-12.569,34.737,116.631)
C6: (-9.477,36.005,115.155)
C5: (-10.503,35.910,116.028)
O3': (-8.594,37.024,110.023)
Image (generated by PyMOL):