ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5463:5464

Extra

PDB:
ATOM 1 O3' U A 462 75.958 -0.148 291.032 1.00 52.71 O
ATOM 2 P G A 463 76.542 -1.178 292.115 1.00 55.99 P
ATOM 3 OP1 G A 463 76.080 -0.669 293.448 1.00 56.45 O
ATOM 4 OP2 G A 463 78.024 -1.304 291.866 1.00 55.43 O
ATOM 5 O5' G A 463 75.787 -2.550 291.739 1.00 56.23 O
ATOM 6 C5' G A 463 74.397 -2.690 291.984 1.00 56.79 C
ATOM 7 C4' G A 463 73.882 -4.033 291.564 1.00 56.94 C
ATOM 8 O4' G A 463 74.208 -4.264 290.173 1.00 56.53 O
ATOM 9 C3' G A 463 74.472 -5.241 292.278 1.00 56.96 C
ATOM 10 O3' G A 463 73.931 -5.457 293.571 1.00 57.47 O
ATOM 11 C2' G A 463 74.199 -6.372 291.288 1.00 56.90 C
ATOM 12 O2' G A 463 72.851 -6.808 291.355 1.00 57.44 O
ATOM 13 C1' G A 463 74.425 -5.650 289.953 1.00 56.48 C
ATOM 14 N9 G A 463 75.809 -5.822 289.480 1.00 55.90 N
ATOM 15 C8 G A 463 76.770 -4.836 289.378 1.00 55.48 C
ATOM 16 N7 G A 463 77.911 -5.304 288.955 1.00 55.03 N
ATOM 17 C5 G A 463 77.680 -6.675 288.785 1.00 55.16 C
ATOM 18 C6 G A 463 78.520 -7.722 288.337 1.00 54.85 C
ATOM 19 O6 G A 463 79.691 -7.692 287.982 1.00 54.39 O
ATOM 20 N1 G A 463 77.886 -8.948 288.320 1.00 55.16 N
ATOM 21 C2 G A 463 76.594 -9.167 288.672 1.00 55.69 C
ATOM 22 N2 G A 463 76.198 -10.422 288.595 1.00 55.92 N
ATOM 23 N3 G A 463 75.789 -8.222 289.071 1.00 55.99 N
ATOM 24 C4 G A 463 76.393 -7.010 289.107 1.00 55.70 C
ATOM 25 P G A 464 74.876 -5.941 294.791 1.00 56.42 P
ATOM 26 OP1 G A 464 74.129 -5.685 296.037 1.00 56.98 O
ATOM 27 OP2 G A 464 76.203 -5.312 294.627 1.00 55.87 O
ATOM 28 O5' G A 464 74.996 -7.491 294.524 1.00 56.41 O
TER

ATOM 1 O3' G B 463 73.931 -5.457 293.571 1.00 57.47 O
ATOM 2 P G B 464 74.876 -5.941 294.791 1.00 56.42 P
ATOM 3 OP1 G B 464 74.129 -5.685 296.037 1.00 56.98 O
ATOM 4 OP2 G B 464 76.203 -5.312 294.627 1.00 55.87 O
ATOM 5 O5' G B 464 74.996 -7.491 294.524 1.00 56.41 O
ATOM 6 C5' G B 464 73.851 -8.254 294.256 1.00 56.81 C
ATOM 7 C4' G B 464 74.206 -9.565 293.622 1.00 56.64 C
ATOM 8 O4' G B 464 74.877 -9.344 292.367 1.00 56.08 O
ATOM 9 C3' G B 464 75.195 -10.426 294.364 1.00 56.53 C
ATOM 10 O3' G B 464 74.644 -11.058 295.478 1.00 57.05 O
ATOM 11 C2' G B 464 75.610 -11.394 293.292 1.00 56.21 C
ATOM 12 O2' G B 464 74.545 -12.305 293.041 1.00 56.62 O
ATOM 13 C1' G B 464 75.723 -10.448 292.103 1.00 55.82 C
ATOM 14 N9 G B 464 77.092 -9.944 291.896 1.00 55.25 N
ATOM 15 C8 G B 464 77.512 -8.652 292.169 1.00 55.06 C
ATOM 16 N7 G B 464 78.773 -8.442 291.861 1.00 54.55 N
ATOM 17 C5 G B 464 79.172 -9.659 291.348 1.00 54.39 C
ATOM 18 C6 G B 464 80.416 -9.992 290.845 1.00 53.90 C
ATOM 19 O6 G B 464 81.361 -9.217 290.805 1.00 53.51 O
ATOM 20 N1 G B 464 80.482 -11.317 290.404 1.00 53.89 N
ATOM 21 C2 G B 464 79.439 -12.207 290.439 1.00 54.33 C
ATOM 22 N2 G B 464 79.697 -13.431 289.961 1.00 54.26 N
ATOM 23 N3 G B 464 78.232 -11.899 290.899 1.00 54.81 N
ATOM 24 C4 G B 464 78.174 -10.612 291.341 1.00 54.81 C
ATOM 25 P C B 465 75.621 -11.519 296.654 1.00 52.62 P
ATOM 26 OP1 C B 465 74.750 -11.872 297.825 1.00 53.26 O
ATOM 27 OP2 C B 465 76.681 -10.469 296.799 1.00 52.19 O
ATOM 28 O5' C B 465 76.258 -12.832 296.057 1.00 52.37 O
TER

Atoms:
OP1: (76.080,-0.669,293.448)
OP2: (78.024,-1.304,291.866)
C3': (74.472,-5.241,292.278)
C1': (74.425,-5.650,289.953)
C5': (74.397,-2.690,291.984)
O6: (79.691,-7.692,287.982)
O4': (74.208,-4.264,290.173)
C8: (76.770,-4.836,289.378)
C2: (76.594,-9.167,288.672)
C6: (78.520,-7.722,288.337)
C5: (77.680,-6.675,288.785)
C4: (76.393,-7.010,289.107)
P: (76.542,-1.178,292.115)
C4': (73.882,-4.033,291.564)
C2': (74.199,-6.372,291.288)
O2': (72.851,-6.808,291.355)
N1: (77.886,-8.948,288.320)
N2: (76.198,-10.422,288.595)
N3: (75.789,-8.222,289.071)
N7: (77.911,-5.304,288.955)
N9: (75.809,-5.822,289.480)
O5': (75.787,-2.550,291.739)
O3': (73.931,-5.457,293.571)
OP1: (74.129,-5.685,296.037)
OP2: (76.203,-5.312,294.627)
C3': (75.195,-10.426,294.364)
C1': (75.723,-10.448,292.103)
C5': (73.851,-8.254,294.256)
O6: (81.361,-9.217,290.805)
O4': (74.877,-9.344,292.367)
C8: (77.512,-8.652,292.169)
C2: (79.439,-12.207,290.439)
C6: (80.416,-9.992,290.845)
C5: (79.172,-9.659,291.348)
C4: (78.174,-10.612,291.341)
P: (74.876,-5.941,294.791)
C4': (74.206,-9.565,293.622)
C2': (75.610,-11.394,293.292)
O2': (74.545,-12.305,293.041)
N1: (80.482,-11.317,290.404)
N2: (79.697,-13.431,289.961)
N3: (78.232,-11.899,290.899)
N7: (78.773,-8.442,291.861)
N9: (77.092,-9.944,291.896)
O5': (74.996,-7.491,294.524)
O3': (74.644,-11.058,295.478)
Image (generated by PyMOL):
PyMOL image
show in jmol