Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B23:B24
Extra
PDB:
ATOM 1 O3' A A 22 -15.179 25.022 12.462 1.00 50.41 O
ATOM 2 P G A 23 -14.660 26.539 12.436 1.00 52.21 P
ATOM 3 OP1 G A 23 -15.383 27.283 13.493 1.00 54.45 O
ATOM 4 OP2 G A 23 -14.702 27.030 11.041 1.00 46.18 O
ATOM 5 O5' G A 23 -13.137 26.370 12.897 1.00 45.10 O
ATOM 6 C5' G A 23 -12.130 27.261 12.437 1.00 44.41 C
ATOM 7 C4' G A 23 -10.756 26.744 12.826 1.00 39.27 C
ATOM 8 O4' G A 23 -10.481 25.502 12.126 1.00 40.79 O
ATOM 9 C3' G A 23 -9.598 27.653 12.451 1.00 39.87 C
ATOM 10 O3' G A 23 -9.399 28.642 13.451 1.00 35.86 O
ATOM 11 C2' G A 23 -8.447 26.655 12.390 1.00 36.60 C
ATOM 12 O2' G A 23 -7.986 26.262 13.666 1.00 37.47 O
ATOM 13 C1' G A 23 -9.134 25.486 11.693 1.00 38.66 C
ATOM 14 N9 G A 23 -9.105 25.633 10.243 1.00 37.87 N
ATOM 15 C8 G A 23 -10.178 25.750 9.395 1.00 40.03 C
ATOM 16 N7 G A 23 -9.837 25.880 8.144 1.00 38.13 N
ATOM 17 C5 G A 23 -8.449 25.850 8.166 1.00 37.06 C
ATOM 18 C6 G A 23 -7.519 25.948 7.105 1.00 35.98 C
ATOM 19 O6 G A 23 -7.749 26.084 5.897 1.00 34.58 O
ATOM 20 N1 G A 23 -6.205 25.875 7.564 1.00 35.92 N
ATOM 21 C2 G A 23 -5.838 25.726 8.881 1.00 37.62 C
ATOM 22 N2 G A 23 -4.521 25.672 9.135 1.00 35.17 N
ATOM 23 N3 G A 23 -6.702 25.633 9.882 1.00 35.90 N
ATOM 24 C4 G A 23 -7.984 25.701 9.451 1.00 34.94 C
ATOM 25 P G A 24 -9.124 30.157 13.014 1.00 42.16 P
ATOM 26 OP1 G A 24 -9.124 30.991 14.237 1.00 40.36 O
ATOM 27 OP2 G A 24 -10.031 30.485 11.893 1.00 40.11 O
ATOM 28 O5' G A 24 -7.623 30.097 12.467 1.00 38.42 O
TER
ATOM 1 O3' G B 23 -9.399 28.642 13.451 1.00 35.86 O
ATOM 2 P G B 24 -9.124 30.157 13.014 1.00 42.16 P
ATOM 3 OP1 G B 24 -9.124 30.991 14.237 1.00 40.36 O
ATOM 4 OP2 G B 24 -10.031 30.485 11.893 1.00 40.11 O
ATOM 5 O5' G B 24 -7.623 30.097 12.467 1.00 38.42 O
ATOM 6 C5' G B 24 -6.553 29.829 13.361 1.00 34.90 C
ATOM 7 C4' G B 24 -5.225 29.888 12.628 1.00 36.04 C
ATOM 8 O4' G B 24 -5.100 28.739 11.752 1.00 37.61 O
ATOM 9 C3' G B 24 -5.047 31.085 11.705 1.00 32.20 C
ATOM 10 O3' G B 24 -4.584 32.215 12.423 1.00 35.17 O
ATOM 11 C2' G B 24 -3.975 30.552 10.764 1.00 33.58 C
ATOM 12 O2' G B 24 -2.692 30.527 11.357 1.00 33.61 O
ATOM 13 C1' G B 24 -4.505 29.141 10.534 1.00 37.68 C
ATOM 14 N9 G B 24 -5.522 29.146 9.490 1.00 35.26 N
ATOM 15 C8 G B 24 -6.879 28.987 9.632 1.00 37.50 C
ATOM 16 N7 G B 24 -7.528 29.060 8.500 1.00 38.23 N
ATOM 17 C5 G B 24 -6.539 29.290 7.553 1.00 33.03 C
ATOM 18 C6 G B 24 -6.635 29.456 6.150 1.00 32.74 C
ATOM 19 O6 G B 24 -7.654 29.435 5.444 1.00 30.94 O
ATOM 20 N1 G B 24 -5.384 29.663 5.569 1.00 30.24 N
ATOM 21 C2 G B 24 -4.193 29.704 6.258 1.00 32.89 C
ATOM 22 N2 G B 24 -3.087 29.916 5.532 1.00 33.82 N
ATOM 23 N3 G B 24 -4.089 29.549 7.572 1.00 29.93 N
ATOM 24 C4 G B 24 -5.299 29.347 8.149 1.00 34.13 C
ATOM 25 P C B 25 -4.943 33.687 11.903 1.00 35.98 P
ATOM 26 OP1 C B 25 -4.325 34.644 12.848 1.00 35.19 O
ATOM 27 OP2 C B 25 -6.397 33.753 11.632 1.00 28.55 O
ATOM 28 O5' C B 25 -4.159 33.777 10.511 1.00 32.02 O
TER
ATOM 2 P G A 23 -14.660 26.539 12.436 1.00 52.21 P
ATOM 3 OP1 G A 23 -15.383 27.283 13.493 1.00 54.45 O
ATOM 4 OP2 G A 23 -14.702 27.030 11.041 1.00 46.18 O
ATOM 5 O5' G A 23 -13.137 26.370 12.897 1.00 45.10 O
ATOM 6 C5' G A 23 -12.130 27.261 12.437 1.00 44.41 C
ATOM 7 C4' G A 23 -10.756 26.744 12.826 1.00 39.27 C
ATOM 8 O4' G A 23 -10.481 25.502 12.126 1.00 40.79 O
ATOM 9 C3' G A 23 -9.598 27.653 12.451 1.00 39.87 C
ATOM 10 O3' G A 23 -9.399 28.642 13.451 1.00 35.86 O
ATOM 11 C2' G A 23 -8.447 26.655 12.390 1.00 36.60 C
ATOM 12 O2' G A 23 -7.986 26.262 13.666 1.00 37.47 O
ATOM 13 C1' G A 23 -9.134 25.486 11.693 1.00 38.66 C
ATOM 14 N9 G A 23 -9.105 25.633 10.243 1.00 37.87 N
ATOM 15 C8 G A 23 -10.178 25.750 9.395 1.00 40.03 C
ATOM 16 N7 G A 23 -9.837 25.880 8.144 1.00 38.13 N
ATOM 17 C5 G A 23 -8.449 25.850 8.166 1.00 37.06 C
ATOM 18 C6 G A 23 -7.519 25.948 7.105 1.00 35.98 C
ATOM 19 O6 G A 23 -7.749 26.084 5.897 1.00 34.58 O
ATOM 20 N1 G A 23 -6.205 25.875 7.564 1.00 35.92 N
ATOM 21 C2 G A 23 -5.838 25.726 8.881 1.00 37.62 C
ATOM 22 N2 G A 23 -4.521 25.672 9.135 1.00 35.17 N
ATOM 23 N3 G A 23 -6.702 25.633 9.882 1.00 35.90 N
ATOM 24 C4 G A 23 -7.984 25.701 9.451 1.00 34.94 C
ATOM 25 P G A 24 -9.124 30.157 13.014 1.00 42.16 P
ATOM 26 OP1 G A 24 -9.124 30.991 14.237 1.00 40.36 O
ATOM 27 OP2 G A 24 -10.031 30.485 11.893 1.00 40.11 O
ATOM 28 O5' G A 24 -7.623 30.097 12.467 1.00 38.42 O
TER
ATOM 1 O3' G B 23 -9.399 28.642 13.451 1.00 35.86 O
ATOM 2 P G B 24 -9.124 30.157 13.014 1.00 42.16 P
ATOM 3 OP1 G B 24 -9.124 30.991 14.237 1.00 40.36 O
ATOM 4 OP2 G B 24 -10.031 30.485 11.893 1.00 40.11 O
ATOM 5 O5' G B 24 -7.623 30.097 12.467 1.00 38.42 O
ATOM 6 C5' G B 24 -6.553 29.829 13.361 1.00 34.90 C
ATOM 7 C4' G B 24 -5.225 29.888 12.628 1.00 36.04 C
ATOM 8 O4' G B 24 -5.100 28.739 11.752 1.00 37.61 O
ATOM 9 C3' G B 24 -5.047 31.085 11.705 1.00 32.20 C
ATOM 10 O3' G B 24 -4.584 32.215 12.423 1.00 35.17 O
ATOM 11 C2' G B 24 -3.975 30.552 10.764 1.00 33.58 C
ATOM 12 O2' G B 24 -2.692 30.527 11.357 1.00 33.61 O
ATOM 13 C1' G B 24 -4.505 29.141 10.534 1.00 37.68 C
ATOM 14 N9 G B 24 -5.522 29.146 9.490 1.00 35.26 N
ATOM 15 C8 G B 24 -6.879 28.987 9.632 1.00 37.50 C
ATOM 16 N7 G B 24 -7.528 29.060 8.500 1.00 38.23 N
ATOM 17 C5 G B 24 -6.539 29.290 7.553 1.00 33.03 C
ATOM 18 C6 G B 24 -6.635 29.456 6.150 1.00 32.74 C
ATOM 19 O6 G B 24 -7.654 29.435 5.444 1.00 30.94 O
ATOM 20 N1 G B 24 -5.384 29.663 5.569 1.00 30.24 N
ATOM 21 C2 G B 24 -4.193 29.704 6.258 1.00 32.89 C
ATOM 22 N2 G B 24 -3.087 29.916 5.532 1.00 33.82 N
ATOM 23 N3 G B 24 -4.089 29.549 7.572 1.00 29.93 N
ATOM 24 C4 G B 24 -5.299 29.347 8.149 1.00 34.13 C
ATOM 25 P C B 25 -4.943 33.687 11.903 1.00 35.98 P
ATOM 26 OP1 C B 25 -4.325 34.644 12.848 1.00 35.19 O
ATOM 27 OP2 C B 25 -6.397 33.753 11.632 1.00 28.55 O
ATOM 28 O5' C B 25 -4.159 33.777 10.511 1.00 32.02 O
TER
Atoms:
OP1: (-15.383,27.283,13.493)
OP2: (-14.702,27.030,11.041)
C3': (-9.598,27.653,12.451)
C1': (-9.134,25.486,11.693)
C5': (-12.130,27.261,12.437)
O6: (-7.749,26.084,5.897)
O4': (-10.481,25.502,12.126)
C8: (-10.178,25.750,9.395)
C2: (-5.838,25.726,8.881)
C6: (-7.519,25.948,7.105)
C5: (-8.449,25.850,8.166)
C4: (-7.984,25.701,9.451)
P: (-14.660,26.539,12.436)
C4': (-10.756,26.744,12.826)
C2': (-8.447,26.655,12.390)
O2': (-7.986,26.262,13.666)
N1: (-6.205,25.875,7.564)
N2: (-4.521,25.672,9.135)
N3: (-6.702,25.633,9.882)
N7: (-9.837,25.880,8.144)
N9: (-9.105,25.633,10.243)
O5': (-13.137,26.370,12.897)
O3': (-9.399,28.642,13.451)
OP2: (-14.702,27.030,11.041)
C3': (-9.598,27.653,12.451)
C1': (-9.134,25.486,11.693)
C5': (-12.130,27.261,12.437)
O6: (-7.749,26.084,5.897)
O4': (-10.481,25.502,12.126)
C8: (-10.178,25.750,9.395)
C2: (-5.838,25.726,8.881)
C6: (-7.519,25.948,7.105)
C5: (-8.449,25.850,8.166)
C4: (-7.984,25.701,9.451)
P: (-14.660,26.539,12.436)
C4': (-10.756,26.744,12.826)
C2': (-8.447,26.655,12.390)
O2': (-7.986,26.262,13.666)
N1: (-6.205,25.875,7.564)
N2: (-4.521,25.672,9.135)
N3: (-6.702,25.633,9.882)
N7: (-9.837,25.880,8.144)
N9: (-9.105,25.633,10.243)
O5': (-13.137,26.370,12.897)
O3': (-9.399,28.642,13.451)
OP1: (-9.124,30.991,14.237)
OP2: (-10.031,30.485,11.893)
C3': (-5.047,31.085,11.705)
C1': (-4.505,29.141,10.534)
C5': (-6.553,29.829,13.361)
O6: (-7.654,29.435,5.444)
O4': (-5.100,28.739,11.752)
C8: (-6.879,28.987,9.632)
C2: (-4.193,29.704,6.258)
C6: (-6.635,29.456,6.150)
C5: (-6.539,29.290,7.553)
C4: (-5.299,29.347,8.149)
P: (-9.124,30.157,13.014)
C4': (-5.225,29.888,12.628)
C2': (-3.975,30.552,10.764)
O2': (-2.692,30.527,11.357)
N1: (-5.384,29.663,5.569)
N2: (-3.087,29.916,5.532)
N3: (-4.089,29.549,7.572)
N7: (-7.528,29.060,8.500)
N9: (-5.522,29.146,9.490)
O5': (-7.623,30.097,12.467)
O3': (-4.584,32.215,12.423)
OP2: (-10.031,30.485,11.893)
C3': (-5.047,31.085,11.705)
C1': (-4.505,29.141,10.534)
C5': (-6.553,29.829,13.361)
O6: (-7.654,29.435,5.444)
O4': (-5.100,28.739,11.752)
C8: (-6.879,28.987,9.632)
C2: (-4.193,29.704,6.258)
C6: (-6.635,29.456,6.150)
C5: (-6.539,29.290,7.553)
C4: (-5.299,29.347,8.149)
P: (-9.124,30.157,13.014)
C4': (-5.225,29.888,12.628)
C2': (-3.975,30.552,10.764)
O2': (-2.692,30.527,11.357)
N1: (-5.384,29.663,5.569)
N2: (-3.087,29.916,5.532)
N3: (-4.089,29.549,7.572)
N7: (-7.528,29.060,8.500)
N9: (-5.522,29.146,9.490)
O5': (-7.623,30.097,12.467)
O3': (-4.584,32.215,12.423)
Image (generated by PyMOL):