Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12868:12869
Extra
PDB:
ATOM 1 O3' C A2867 22.489 10.498 -13.299 1.00 64.77 O
ATOM 2 P G A2868 22.468 10.139 -14.859 1.00 78.00 P
ATOM 3 OP1 G A2868 21.495 9.037 -15.029 1.00 78.14 O
ATOM 4 OP2 G A2868 23.879 9.923 -15.295 1.00 77.98 O
ATOM 5 O5' G A2868 21.909 11.476 -15.502 1.00 78.56 O
ATOM 6 C5' G A2868 22.513 12.730 -15.206 1.00 78.44 C
ATOM 7 C4' G A2868 22.122 13.798 -16.202 1.00 79.15 C
ATOM 8 O4' G A2868 22.669 13.460 -17.505 1.00 79.71 O
ATOM 9 C3' G A2868 20.619 13.976 -16.411 1.00 79.53 C
ATOM 10 O3' G A2868 20.343 15.332 -16.763 1.00 79.94 O
ATOM 11 C2' G A2868 20.366 13.093 -17.609 1.00 80.10 C
ATOM 12 O2' G A2868 19.179 13.378 -18.308 1.00 80.72 O
ATOM 13 C1' G A2868 21.619 13.379 -18.436 1.00 80.37 C
ATOM 14 N9 G A2868 21.944 12.346 -19.418 1.00 80.73 N
ATOM 15 C8 G A2868 22.435 12.602 -20.665 1.00 81.36 C
ATOM 16 N7 G A2868 22.596 11.521 -21.378 1.00 81.61 N
ATOM 17 C5 G A2868 22.201 10.471 -20.552 1.00 81.11 C
ATOM 18 C6 G A2868 22.147 9.053 -20.775 1.00 81.11 C
ATOM 19 O6 G A2868 22.452 8.379 -21.770 1.00 81.56 O
ATOM 20 N1 G A2868 21.670 8.367 -19.679 1.00 80.53 N
ATOM 21 C2 G A2868 21.283 8.966 -18.523 1.00 80.02 C
ATOM 22 N2 G A2868 20.838 8.152 -17.565 1.00 79.50 N
ATOM 23 N3 G A2868 21.321 10.264 -18.300 1.00 80.01 N
ATOM 24 C4 G A2868 21.792 10.973 -19.339 1.00 80.57 C
ATOM 25 P C A2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 26 OP1 C A2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 27 OP2 C A2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 28 O5' C A2869 18.308 15.608 -15.339 1.00 78.97 O
TER
ATOM 1 O3' G B2868 20.343 15.332 -16.763 1.00 79.94 O
ATOM 2 P C B2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 3 OP1 C B2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 4 OP2 C B2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 5 O5' C B2869 18.308 15.608 -15.339 1.00 78.97 O
ATOM 6 C5' C B2869 17.175 15.695 -16.180 1.00 79.63 C
ATOM 7 C4' C B2869 16.038 14.945 -15.562 1.00 79.42 C
ATOM 8 O4' C B2869 16.416 13.544 -15.430 1.00 79.10 O
ATOM 9 C3' C B2869 15.704 15.361 -14.137 1.00 78.80 C
ATOM 10 O3' C B2869 14.878 16.504 -14.050 1.00 79.07 O
ATOM 11 C2' C B2869 15.099 14.103 -13.535 1.00 78.44 C
ATOM 12 O2' C B2869 13.759 13.918 -13.956 1.00 78.90 O
ATOM 13 C1' C B2869 15.973 13.036 -14.177 1.00 78.47 C
ATOM 14 N1 C B2869 17.153 12.750 -13.326 1.00 77.79 N
ATOM 15 C2 C B2869 16.890 12.020 -12.168 1.00 77.16 C
ATOM 16 O2 C B2869 15.708 11.646 -11.988 1.00 77.25 O
ATOM 17 N3 C B2869 17.926 11.743 -11.319 1.00 76.52 N
ATOM 18 C4 C B2869 19.160 12.196 -11.575 1.00 76.48 C
ATOM 19 N4 C B2869 20.153 11.918 -10.724 1.00 75.86 N
ATOM 20 C5 C B2869 19.427 12.969 -12.741 1.00 77.11 C
ATOM 21 C6 C B2869 18.412 13.225 -13.571 1.00 77.74 C
ATOM 22 P C B2870 15.349 17.767 -13.164 1.00 74.04 P
ATOM 23 OP1 C B2870 14.324 18.853 -13.341 1.00 74.49 O
ATOM 24 OP2 C B2870 16.779 18.039 -13.529 1.00 73.99 O
ATOM 25 O5' C B2870 15.268 17.211 -11.697 1.00 73.23 O
TER
ATOM 2 P G A2868 22.468 10.139 -14.859 1.00 78.00 P
ATOM 3 OP1 G A2868 21.495 9.037 -15.029 1.00 78.14 O
ATOM 4 OP2 G A2868 23.879 9.923 -15.295 1.00 77.98 O
ATOM 5 O5' G A2868 21.909 11.476 -15.502 1.00 78.56 O
ATOM 6 C5' G A2868 22.513 12.730 -15.206 1.00 78.44 C
ATOM 7 C4' G A2868 22.122 13.798 -16.202 1.00 79.15 C
ATOM 8 O4' G A2868 22.669 13.460 -17.505 1.00 79.71 O
ATOM 9 C3' G A2868 20.619 13.976 -16.411 1.00 79.53 C
ATOM 10 O3' G A2868 20.343 15.332 -16.763 1.00 79.94 O
ATOM 11 C2' G A2868 20.366 13.093 -17.609 1.00 80.10 C
ATOM 12 O2' G A2868 19.179 13.378 -18.308 1.00 80.72 O
ATOM 13 C1' G A2868 21.619 13.379 -18.436 1.00 80.37 C
ATOM 14 N9 G A2868 21.944 12.346 -19.418 1.00 80.73 N
ATOM 15 C8 G A2868 22.435 12.602 -20.665 1.00 81.36 C
ATOM 16 N7 G A2868 22.596 11.521 -21.378 1.00 81.61 N
ATOM 17 C5 G A2868 22.201 10.471 -20.552 1.00 81.11 C
ATOM 18 C6 G A2868 22.147 9.053 -20.775 1.00 81.11 C
ATOM 19 O6 G A2868 22.452 8.379 -21.770 1.00 81.56 O
ATOM 20 N1 G A2868 21.670 8.367 -19.679 1.00 80.53 N
ATOM 21 C2 G A2868 21.283 8.966 -18.523 1.00 80.02 C
ATOM 22 N2 G A2868 20.838 8.152 -17.565 1.00 79.50 N
ATOM 23 N3 G A2868 21.321 10.264 -18.300 1.00 80.01 N
ATOM 24 C4 G A2868 21.792 10.973 -19.339 1.00 80.57 C
ATOM 25 P C A2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 26 OP1 C A2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 27 OP2 C A2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 28 O5' C A2869 18.308 15.608 -15.339 1.00 78.97 O
TER
ATOM 1 O3' G B2868 20.343 15.332 -16.763 1.00 79.94 O
ATOM 2 P C B2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 3 OP1 C B2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 4 OP2 C B2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 5 O5' C B2869 18.308 15.608 -15.339 1.00 78.97 O
ATOM 6 C5' C B2869 17.175 15.695 -16.180 1.00 79.63 C
ATOM 7 C4' C B2869 16.038 14.945 -15.562 1.00 79.42 C
ATOM 8 O4' C B2869 16.416 13.544 -15.430 1.00 79.10 O
ATOM 9 C3' C B2869 15.704 15.361 -14.137 1.00 78.80 C
ATOM 10 O3' C B2869 14.878 16.504 -14.050 1.00 79.07 O
ATOM 11 C2' C B2869 15.099 14.103 -13.535 1.00 78.44 C
ATOM 12 O2' C B2869 13.759 13.918 -13.956 1.00 78.90 O
ATOM 13 C1' C B2869 15.973 13.036 -14.177 1.00 78.47 C
ATOM 14 N1 C B2869 17.153 12.750 -13.326 1.00 77.79 N
ATOM 15 C2 C B2869 16.890 12.020 -12.168 1.00 77.16 C
ATOM 16 O2 C B2869 15.708 11.646 -11.988 1.00 77.25 O
ATOM 17 N3 C B2869 17.926 11.743 -11.319 1.00 76.52 N
ATOM 18 C4 C B2869 19.160 12.196 -11.575 1.00 76.48 C
ATOM 19 N4 C B2869 20.153 11.918 -10.724 1.00 75.86 N
ATOM 20 C5 C B2869 19.427 12.969 -12.741 1.00 77.11 C
ATOM 21 C6 C B2869 18.412 13.225 -13.571 1.00 77.74 C
ATOM 22 P C B2870 15.349 17.767 -13.164 1.00 74.04 P
ATOM 23 OP1 C B2870 14.324 18.853 -13.341 1.00 74.49 O
ATOM 24 OP2 C B2870 16.779 18.039 -13.529 1.00 73.99 O
ATOM 25 O5' C B2870 15.268 17.211 -11.697 1.00 73.23 O
TER
Atoms:
OP1: (21.495,9.037,-15.029)
OP2: (23.879,9.923,-15.295)
C3': (20.619,13.976,-16.411)
C1': (21.619,13.379,-18.436)
C5': (22.513,12.730,-15.206)
O6: (22.452,8.379,-21.770)
O4': (22.669,13.460,-17.505)
C8: (22.435,12.602,-20.665)
C2: (21.283,8.966,-18.523)
C6: (22.147,9.053,-20.775)
C5: (22.201,10.471,-20.552)
C4: (21.792,10.973,-19.339)
P: (22.468,10.139,-14.859)
C4': (22.122,13.798,-16.202)
C2': (20.366,13.093,-17.609)
O2': (19.179,13.378,-18.308)
N1: (21.670,8.367,-19.679)
N2: (20.838,8.152,-17.565)
N3: (21.321,10.264,-18.300)
N7: (22.596,11.521,-21.378)
N9: (21.944,12.346,-19.418)
O5': (21.909,11.476,-15.502)
O3': (20.343,15.332,-16.763)
OP2: (23.879,9.923,-15.295)
C3': (20.619,13.976,-16.411)
C1': (21.619,13.379,-18.436)
C5': (22.513,12.730,-15.206)
O6: (22.452,8.379,-21.770)
O4': (22.669,13.460,-17.505)
C8: (22.435,12.602,-20.665)
C2: (21.283,8.966,-18.523)
C6: (22.147,9.053,-20.775)
C5: (22.201,10.471,-20.552)
C4: (21.792,10.973,-19.339)
P: (22.468,10.139,-14.859)
C4': (22.122,13.798,-16.202)
C2': (20.366,13.093,-17.609)
O2': (19.179,13.378,-18.308)
N1: (21.670,8.367,-19.679)
N2: (20.838,8.152,-17.565)
N3: (21.321,10.264,-18.300)
N7: (22.596,11.521,-21.378)
N9: (21.944,12.346,-19.418)
O5': (21.909,11.476,-15.502)
O3': (20.343,15.332,-16.763)
C2: (16.890,12.020,-12.168)
OP1: (19.426,17.635,-16.362)
OP2: (20.559,16.304,-14.476)
C4: (19.160,12.196,-11.575)
O5': (18.308,15.608,-15.339)
C3': (15.704,15.361,-14.137)
C1': (15.973,13.036,-14.177)
O4': (16.416,13.544,-15.430)
C5': (17.175,15.695,-16.180)
P: (19.682,16.325,-15.684)
O2: (15.708,11.646,-11.988)
C4': (16.038,14.945,-15.562)
C2': (15.099,14.103,-13.535)
O2': (13.759,13.918,-13.956)
N1: (17.153,12.750,-13.326)
N3: (17.926,11.743,-11.319)
N4: (20.153,11.918,-10.724)
C6: (18.412,13.225,-13.571)
C5: (19.427,12.969,-12.741)
O3': (14.878,16.504,-14.050)
OP1: (19.426,17.635,-16.362)
OP2: (20.559,16.304,-14.476)
C4: (19.160,12.196,-11.575)
O5': (18.308,15.608,-15.339)
C3': (15.704,15.361,-14.137)
C1': (15.973,13.036,-14.177)
O4': (16.416,13.544,-15.430)
C5': (17.175,15.695,-16.180)
P: (19.682,16.325,-15.684)
O2: (15.708,11.646,-11.988)
C4': (16.038,14.945,-15.562)
C2': (15.099,14.103,-13.535)
O2': (13.759,13.918,-13.956)
N1: (17.153,12.750,-13.326)
N3: (17.926,11.743,-11.319)
N4: (20.153,11.918,-10.724)
C6: (18.412,13.225,-13.571)
C5: (19.427,12.969,-12.741)
O3': (14.878,16.504,-14.050)
Image (generated by PyMOL):