Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCV:B27:B28
Extra
PDB:
ATOM 1 O3' U A 26 45.418 12.648 5.996 1.00 48.24 O
ATOM 2 P A A 27 44.485 11.370 6.248 1.00 46.70 P
ATOM 3 OP1 A A 27 45.002 10.643 7.438 1.00 43.28 O
ATOM 4 OP2 A A 27 44.352 10.659 4.948 1.00 48.98 O
ATOM 5 O5' A A 27 43.070 11.994 6.645 1.00 44.75 O
ATOM 6 C5' A A 27 42.277 12.721 5.700 1.00 38.14 C
ATOM 7 C4' A A 27 40.831 12.738 6.151 1.00 33.10 C
ATOM 8 O4' A A 27 40.299 11.392 6.109 1.00 30.34 O
ATOM 9 C3' A A 27 40.694 13.205 7.591 1.00 32.01 C
ATOM 10 O3' A A 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 11 C2' A A 27 40.622 11.929 8.430 1.00 30.72 C
ATOM 12 O2' A A 27 39.653 12.032 9.451 1.00 33.97 O
ATOM 13 C1' A A 27 40.099 10.909 7.415 1.00 29.05 C
ATOM 14 N9 A A 27 40.601 9.536 7.500 1.00 25.40 N
ATOM 15 C8 A A 27 41.555 8.905 6.732 1.00 24.60 C
ATOM 16 N7 A A 27 41.736 7.642 7.046 1.00 23.37 N
ATOM 17 C5 A A 27 40.849 7.432 8.094 1.00 24.89 C
ATOM 18 C6 A A 27 40.550 6.297 8.868 1.00 24.52 C
ATOM 19 N6 A A 27 41.140 5.106 8.695 1.00 22.23 N
ATOM 20 N1 A A 27 39.614 6.424 9.834 1.00 24.46 N
ATOM 21 C2 A A 27 39.019 7.613 10.003 1.00 27.01 C
ATOM 22 N3 A A 27 39.213 8.755 9.337 1.00 29.20 N
ATOM 23 C4 A A 27 40.151 8.592 8.388 1.00 25.72 C
ATOM 24 P U A 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 25 OP1 U A 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 26 OP2 U A 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 27 O5' U A 28 38.448 16.153 8.570 1.00 28.30 O
TER
ATOM 1 O3' A B 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 2 P U B 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 3 OP1 U B 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 4 OP2 U B 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 5 O5' U B 28 38.448 16.153 8.570 1.00 28.30 O
ATOM 6 C5' U B 28 37.191 16.028 7.921 1.00 26.63 C
ATOM 7 C4' U B 28 36.090 16.432 8.872 1.00 29.16 C
ATOM 8 O4' U B 28 35.833 15.345 9.804 1.00 28.78 O
ATOM 9 C3' U B 28 36.448 17.619 9.760 1.00 27.50 C
ATOM 10 O3' U B 28 36.197 18.865 9.123 1.00 26.59 O
ATOM 11 C2' U B 28 35.556 17.397 10.970 1.00 26.10 C
ATOM 12 O2' U B 28 34.223 17.822 10.758 1.00 28.57 O
ATOM 13 C1' U B 28 35.618 15.875 11.102 1.00 25.58 C
ATOM 14 N1 U B 28 36.732 15.454 11.963 1.00 25.78 N
ATOM 15 C2 U B 28 36.608 15.713 13.313 1.00 25.12 C
ATOM 16 O2 U B 28 35.620 16.254 13.787 1.00 28.24 O
ATOM 17 N3 U B 28 37.676 15.323 14.086 1.00 22.91 N
ATOM 18 C4 U B 28 38.836 14.718 13.655 1.00 24.50 C
ATOM 19 O4 U B 28 39.721 14.448 14.478 1.00 22.86 O
ATOM 20 C5 U B 28 38.891 14.477 12.237 1.00 24.35 C
ATOM 21 C6 U B 28 37.858 14.841 11.459 1.00 24.42 C
ATOM 22 P C B 29 37.121 20.136 9.466 1.00 26.54 P
ATOM 23 OP1 C B 29 36.801 21.233 8.522 1.00 26.26 O
ATOM 24 OP2 C B 29 38.525 19.677 9.589 1.00 25.21 O
ATOM 25 O5' C B 29 36.643 20.555 10.928 1.00 29.26 O
TER
ATOM 2 P A A 27 44.485 11.370 6.248 1.00 46.70 P
ATOM 3 OP1 A A 27 45.002 10.643 7.438 1.00 43.28 O
ATOM 4 OP2 A A 27 44.352 10.659 4.948 1.00 48.98 O
ATOM 5 O5' A A 27 43.070 11.994 6.645 1.00 44.75 O
ATOM 6 C5' A A 27 42.277 12.721 5.700 1.00 38.14 C
ATOM 7 C4' A A 27 40.831 12.738 6.151 1.00 33.10 C
ATOM 8 O4' A A 27 40.299 11.392 6.109 1.00 30.34 O
ATOM 9 C3' A A 27 40.694 13.205 7.591 1.00 32.01 C
ATOM 10 O3' A A 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 11 C2' A A 27 40.622 11.929 8.430 1.00 30.72 C
ATOM 12 O2' A A 27 39.653 12.032 9.451 1.00 33.97 O
ATOM 13 C1' A A 27 40.099 10.909 7.415 1.00 29.05 C
ATOM 14 N9 A A 27 40.601 9.536 7.500 1.00 25.40 N
ATOM 15 C8 A A 27 41.555 8.905 6.732 1.00 24.60 C
ATOM 16 N7 A A 27 41.736 7.642 7.046 1.00 23.37 N
ATOM 17 C5 A A 27 40.849 7.432 8.094 1.00 24.89 C
ATOM 18 C6 A A 27 40.550 6.297 8.868 1.00 24.52 C
ATOM 19 N6 A A 27 41.140 5.106 8.695 1.00 22.23 N
ATOM 20 N1 A A 27 39.614 6.424 9.834 1.00 24.46 N
ATOM 21 C2 A A 27 39.019 7.613 10.003 1.00 27.01 C
ATOM 22 N3 A A 27 39.213 8.755 9.337 1.00 29.20 N
ATOM 23 C4 A A 27 40.151 8.592 8.388 1.00 25.72 C
ATOM 24 P U A 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 25 OP1 U A 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 26 OP2 U A 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 27 O5' U A 28 38.448 16.153 8.570 1.00 28.30 O
TER
ATOM 1 O3' A B 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 2 P U B 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 3 OP1 U B 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 4 OP2 U B 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 5 O5' U B 28 38.448 16.153 8.570 1.00 28.30 O
ATOM 6 C5' U B 28 37.191 16.028 7.921 1.00 26.63 C
ATOM 7 C4' U B 28 36.090 16.432 8.872 1.00 29.16 C
ATOM 8 O4' U B 28 35.833 15.345 9.804 1.00 28.78 O
ATOM 9 C3' U B 28 36.448 17.619 9.760 1.00 27.50 C
ATOM 10 O3' U B 28 36.197 18.865 9.123 1.00 26.59 O
ATOM 11 C2' U B 28 35.556 17.397 10.970 1.00 26.10 C
ATOM 12 O2' U B 28 34.223 17.822 10.758 1.00 28.57 O
ATOM 13 C1' U B 28 35.618 15.875 11.102 1.00 25.58 C
ATOM 14 N1 U B 28 36.732 15.454 11.963 1.00 25.78 N
ATOM 15 C2 U B 28 36.608 15.713 13.313 1.00 25.12 C
ATOM 16 O2 U B 28 35.620 16.254 13.787 1.00 28.24 O
ATOM 17 N3 U B 28 37.676 15.323 14.086 1.00 22.91 N
ATOM 18 C4 U B 28 38.836 14.718 13.655 1.00 24.50 C
ATOM 19 O4 U B 28 39.721 14.448 14.478 1.00 22.86 O
ATOM 20 C5 U B 28 38.891 14.477 12.237 1.00 24.35 C
ATOM 21 C6 U B 28 37.858 14.841 11.459 1.00 24.42 C
ATOM 22 P C B 29 37.121 20.136 9.466 1.00 26.54 P
ATOM 23 OP1 C B 29 36.801 21.233 8.522 1.00 26.26 O
ATOM 24 OP2 C B 29 38.525 19.677 9.589 1.00 25.21 O
ATOM 25 O5' C B 29 36.643 20.555 10.928 1.00 29.26 O
TER
Atoms:
OP1: (45.002,10.643,7.438)
OP2: (44.352,10.659,4.948)
C3': (40.694,13.205,7.591)
C1': (40.099,10.909,7.415)
C5': (42.277,12.721,5.700)
O4': (40.299,11.392,6.109)
C8: (41.555,8.905,6.732)
O2': (39.653,12.032,9.451)
C6: (40.550,6.297,8.868)
C5: (40.849,7.432,8.094)
C4: (40.151,8.592,8.388)
P: (44.485,11.370,6.248)
C4': (40.831,12.738,6.151)
C2': (40.622,11.929,8.430)
C2: (39.019,7.613,10.003)
N1: (39.614,6.424,9.834)
N3: (39.213,8.755,9.337)
N6: (41.140,5.106,8.695)
N7: (41.736,7.642,7.046)
N9: (40.601,9.536,7.500)
O5': (43.070,11.994,6.645)
O3': (39.583,14.082,7.770)
OP2: (44.352,10.659,4.948)
C3': (40.694,13.205,7.591)
C1': (40.099,10.909,7.415)
C5': (42.277,12.721,5.700)
O4': (40.299,11.392,6.109)
C8: (41.555,8.905,6.732)
O2': (39.653,12.032,9.451)
C6: (40.550,6.297,8.868)
C5: (40.849,7.432,8.094)
C4: (40.151,8.592,8.388)
P: (44.485,11.370,6.248)
C4': (40.831,12.738,6.151)
C2': (40.622,11.929,8.430)
C2: (39.019,7.613,10.003)
N1: (39.614,6.424,9.834)
N3: (39.213,8.755,9.337)
N6: (41.140,5.106,8.695)
N7: (41.736,7.642,7.046)
N9: (40.601,9.536,7.500)
O5': (43.070,11.994,6.645)
O3': (39.583,14.082,7.770)
C4: (38.836,14.718,13.655)
N3: (37.676,15.323,14.086)
OP1: (39.850,16.224,6.502)
OP2: (40.909,15.925,8.819)
C2: (36.608,15.713,13.313)
C1': (35.618,15.875,11.102)
C3': (36.448,17.619,9.760)
O5': (38.448,16.153,8.570)
O4': (35.833,15.345,9.804)
C5': (37.191,16.028,7.921)
P: (39.796,15.666,7.875)
C4': (36.090,16.432,8.872)
C2': (35.556,17.397,10.970)
O2': (34.223,17.822,10.758)
N1: (36.732,15.454,11.963)
O4: (39.721,14.448,14.478)
O2: (35.620,16.254,13.787)
C6: (37.858,14.841,11.459)
C5: (38.891,14.477,12.237)
O3': (36.197,18.865,9.123)
N3: (37.676,15.323,14.086)
OP1: (39.850,16.224,6.502)
OP2: (40.909,15.925,8.819)
C2: (36.608,15.713,13.313)
C1': (35.618,15.875,11.102)
C3': (36.448,17.619,9.760)
O5': (38.448,16.153,8.570)
O4': (35.833,15.345,9.804)
C5': (37.191,16.028,7.921)
P: (39.796,15.666,7.875)
C4': (36.090,16.432,8.872)
C2': (35.556,17.397,10.970)
O2': (34.223,17.822,10.758)
N1: (36.732,15.454,11.963)
O4: (39.721,14.448,14.478)
O2: (35.620,16.254,13.787)
C6: (37.858,14.841,11.459)
C5: (38.891,14.477,12.237)
O3': (36.197,18.865,9.123)
Image (generated by PyMOL):