ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G8T:S41:S42

Extra

PDB:
ATOM 1 O3' U A 40 9.695 66.095 7.248 1.00 76.29 O
ATOM 2 P A A 41 8.949 65.875 8.647 1.00 75.75 P
ATOM 3 OP1 A A 41 7.581 66.429 8.506 1.00 75.43 O
ATOM 4 OP2 A A 41 9.829 66.378 9.729 1.00 75.87 O
ATOM 5 O5' A A 41 8.869 64.277 8.760 1.00 74.49 O
ATOM 6 C5' A A 41 7.872 63.539 8.058 1.00 72.75 C
ATOM 7 C4' A A 41 6.843 62.966 9.020 1.00 71.32 C
ATOM 8 O4' A A 41 7.523 62.313 10.122 1.00 70.56 O
ATOM 9 C3' A A 41 5.887 63.976 9.656 1.00 70.78 C
ATOM 10 O3' A A 41 4.553 63.484 9.584 1.00 70.65 O
ATOM 11 C2' A A 41 6.387 64.080 11.096 1.00 70.42 C
ATOM 12 O2' A A 41 5.371 64.414 12.022 1.00 70.43 O
ATOM 13 C1' A A 41 6.857 62.652 11.319 1.00 70.00 C
ATOM 14 N9 A A 41 7.757 62.483 12.456 1.00 69.11 N
ATOM 15 C8 A A 41 9.104 62.712 12.492 1.00 68.92 C
ATOM 16 N7 A A 41 9.650 62.471 13.659 1.00 68.75 N
ATOM 17 C5 A A 41 8.587 62.056 14.444 1.00 68.66 C
ATOM 18 C6 A A 41 8.495 61.650 15.794 1.00 68.55 C
ATOM 19 N6 A A 41 9.544 61.598 16.620 1.00 68.52 N
ATOM 20 N1 A A 41 7.278 61.297 16.267 1.00 68.41 N
ATOM 21 C2 A A 41 6.221 61.350 15.444 1.00 68.41 C
ATOM 22 N3 A A 41 6.188 61.713 14.160 1.00 68.54 N
ATOM 23 C4 A A 41 7.412 62.057 13.715 1.00 68.66 C
ATOM 24 P U A 42 3.451 64.227 8.693 1.00 70.52 P
ATOM 25 OP1 U A 42 4.028 64.504 7.356 1.00 70.51 O
ATOM 26 OP2 U A 42 2.888 65.333 9.496 1.00 70.34 O
ATOM 27 O5' U A 42 2.323 63.105 8.535 1.00 70.69 O
TER

ATOM 1 O3' A B 41 4.553 63.484 9.584 1.00 70.65 O
ATOM 2 P U B 42 3.451 64.227 8.693 1.00 70.52 P
ATOM 3 OP1 U B 42 4.028 64.504 7.356 1.00 70.51 O
ATOM 4 OP2 U B 42 2.888 65.333 9.496 1.00 70.34 O
ATOM 5 O5' U B 42 2.323 63.105 8.535 1.00 70.69 O
ATOM 6 C5' U B 42 2.598 61.830 7.959 1.00 70.99 C
ATOM 7 C4' U B 42 1.414 60.900 8.151 1.00 71.54 C
ATOM 8 O4' U B 42 1.396 60.433 9.526 1.00 71.82 O
ATOM 9 C3' U B 42 0.040 61.533 7.949 1.00 71.88 C
ATOM 10 O3' U B 42 -0.354 61.515 6.579 1.00 72.32 O
ATOM 11 C2' U B 42 -0.847 60.655 8.827 1.00 71.90 C
ATOM 12 O2' U B 42 -1.211 59.428 8.222 1.00 71.62 O
ATOM 13 C1' U B 42 0.068 60.416 10.030 1.00 71.98 C
ATOM 14 N1 U B 42 -0.098 61.439 11.138 1.00 72.16 N
ATOM 15 C2 U B 42 -1.302 61.537 11.827 1.00 72.37 C
ATOM 16 O2 U B 42 -2.277 60.838 11.609 1.00 72.73 O
ATOM 17 N3 U B 42 -1.338 62.504 12.806 1.00 72.35 N
ATOM 18 C4 U B 42 -0.318 63.368 13.167 1.00 72.29 C
ATOM 19 O4 U B 42 -0.500 64.180 14.068 1.00 72.14 O
ATOM 20 C5 U B 42 0.903 63.212 12.415 1.00 72.38 C
ATOM 21 C6 U B 42 0.962 62.277 11.455 1.00 72.33 C
ATOM 22 P C B 43 -1.179 62.740 5.952 1.00 72.68 P
ATOM 23 OP1 C B 43 -1.304 62.476 4.501 1.00 72.80 O
ATOM 24 OP2 C B 43 -0.579 64.010 6.417 1.00 72.60 O
ATOM 25 O5' C B 43 -2.625 62.607 6.618 1.00 72.92 O
TER

Atoms:
OP1: (7.581,66.429,8.506)
OP2: (9.829,66.378,9.729)
C3': (5.887,63.976,9.656)
C1': (6.857,62.652,11.319)
C5': (7.872,63.539,8.058)
O4': (7.523,62.313,10.122)
C8: (9.104,62.712,12.492)
O2': (5.371,64.414,12.022)
C6: (8.495,61.650,15.794)
C5: (8.587,62.056,14.444)
C4: (7.412,62.057,13.715)
P: (8.949,65.875,8.647)
C4': (6.843,62.966,9.020)
C2': (6.387,64.080,11.096)
C2: (6.221,61.350,15.444)
N1: (7.278,61.297,16.267)
N3: (6.188,61.713,14.160)
N6: (9.544,61.598,16.620)
N7: (9.650,62.471,13.659)
N9: (7.757,62.483,12.456)
O5': (8.869,64.277,8.760)
O3': (4.553,63.484,9.584)
C4: (-0.318,63.368,13.167)
N3: (-1.338,62.504,12.806)
OP1: (4.028,64.504,7.356)
OP2: (2.888,65.333,9.496)
C2: (-1.302,61.537,11.827)
C1': (0.068,60.416,10.030)
C3': (0.040,61.533,7.949)
O5': (2.323,63.105,8.535)
O4': (1.396,60.433,9.526)
C5': (2.598,61.830,7.959)
P: (3.451,64.227,8.693)
C4': (1.414,60.900,8.151)
C2': (-0.847,60.655,8.827)
O2': (-1.211,59.428,8.222)
N1: (-0.098,61.439,11.138)
O4: (-0.500,64.180,14.068)
O2: (-2.277,60.838,11.609)
C6: (0.962,62.277,11.455)
C5: (0.903,63.212,12.415)
O3': (-0.354,61.515,6.579)
Image (generated by PyMOL):
PyMOL image
show in jmol