ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G8T:R41:R42

Extra

PDB:
ATOM 1 O3' U A 40 -5.025 55.300 46.993 1.00 53.07 O
ATOM 2 P A A 41 -4.489 56.605 46.233 1.00 52.12 P
ATOM 3 OP1 A A 41 -4.263 57.698 47.212 1.00 52.37 O
ATOM 4 OP2 A A 41 -5.349 56.833 45.049 1.00 51.91 O
ATOM 5 O5' A A 41 -3.060 56.110 45.718 1.00 50.61 O
ATOM 6 C5' A A 41 -1.971 55.962 46.625 1.00 48.58 C
ATOM 7 C4' A A 41 -0.675 55.818 45.850 1.00 47.21 C
ATOM 8 O4' A A 41 -0.955 55.171 44.580 1.00 46.57 O
ATOM 9 C3' A A 41 0.039 57.125 45.514 1.00 46.56 C
ATOM 10 O3' A A 41 1.442 56.945 45.628 1.00 46.10 O
ATOM 11 C2' A A 41 -0.350 57.373 44.060 1.00 46.42 C
ATOM 12 O2' A A 41 0.628 58.124 43.365 1.00 46.83 O
ATOM 13 C1' A A 41 -0.403 55.941 43.533 1.00 45.73 C
ATOM 14 N9 A A 41 -1.212 55.769 42.332 1.00 44.32 N
ATOM 15 C8 A A 41 -2.559 55.546 42.252 1.00 43.85 C
ATOM 16 N7 A A 41 -3.006 55.434 41.023 1.00 43.28 N
ATOM 17 C5 A A 41 -1.872 55.594 40.246 1.00 43.18 C
ATOM 18 C6 A A 41 -1.659 55.581 38.850 1.00 43.13 C
ATOM 19 N6 A A 41 -2.639 55.390 37.958 1.00 43.03 N
ATOM 20 N1 A A 41 -0.395 55.770 38.404 1.00 43.11 N
ATOM 21 C2 A A 41 0.591 55.964 39.292 1.00 43.40 C
ATOM 22 N3 A A 41 0.511 55.994 40.625 1.00 43.50 N
ATOM 23 C4 A A 41 -0.756 55.800 41.038 1.00 43.63 C
ATOM 24 P U A 42 2.240 57.499 46.892 1.00 46.36 P
ATOM 25 OP1 U A 42 1.691 56.844 48.101 1.00 46.55 O
ATOM 26 OP2 U A 42 2.257 58.976 46.808 1.00 46.53 O
ATOM 27 O5' U A 42 3.729 56.962 46.633 1.00 45.62 O
TER

ATOM 1 O3' A B 41 1.442 56.945 45.628 1.00 46.10 O
ATOM 2 P U B 42 2.240 57.499 46.892 1.00 46.36 P
ATOM 3 OP1 U B 42 1.691 56.844 48.101 1.00 46.55 O
ATOM 4 OP2 U B 42 2.257 58.976 46.808 1.00 46.53 O
ATOM 5 O5' U B 42 3.729 56.962 46.633 1.00 45.62 O
ATOM 6 C5' U B 42 4.045 55.572 46.726 1.00 44.09 C
ATOM 7 C4' U B 42 5.469 55.276 46.283 1.00 42.91 C
ATOM 8 O4' U B 42 5.556 55.339 44.838 1.00 42.59 O
ATOM 9 C3' U B 42 6.535 56.250 46.771 1.00 42.23 C
ATOM 10 O3' U B 42 7.004 55.873 48.046 1.00 41.76 O
ATOM 11 C2' U B 42 7.617 56.117 45.705 1.00 42.14 C
ATOM 12 O2' U B 42 8.458 54.991 45.864 1.00 42.11 O
ATOM 13 C1' U B 42 6.760 55.981 44.449 1.00 42.39 C
ATOM 14 N1 U B 42 6.444 57.301 43.795 1.00 42.46 N
ATOM 15 C2 U B 42 7.470 58.072 43.268 1.00 42.49 C
ATOM 16 O2 U B 42 8.647 57.755 43.293 1.00 42.62 O
ATOM 17 N3 U B 42 7.066 59.257 42.698 1.00 42.60 N
ATOM 18 C4 U B 42 5.771 59.741 42.600 1.00 42.74 C
ATOM 19 O4 U B 42 5.569 60.822 42.058 1.00 43.22 O
ATOM 20 C5 U B 42 4.756 58.890 43.171 1.00 42.51 C
ATOM 21 C6 U B 42 5.125 57.732 43.732 1.00 42.49 C
ATOM 22 P C B 43 7.145 56.978 49.190 1.00 41.46 P
ATOM 23 OP1 C B 43 7.454 56.283 50.462 1.00 41.72 O
ATOM 24 OP2 C B 43 5.955 57.857 49.130 1.00 41.39 O
ATOM 25 O5' C B 43 8.447 57.781 48.712 1.00 40.17 O
TER

Atoms:
OP1: (-4.263,57.698,47.212)
OP2: (-5.349,56.833,45.049)
C3': (0.039,57.125,45.514)
C1': (-0.403,55.941,43.533)
C5': (-1.971,55.962,46.625)
O4': (-0.955,55.171,44.580)
C8: (-2.559,55.546,42.252)
O2': (0.628,58.124,43.365)
C6: (-1.659,55.581,38.850)
C5: (-1.872,55.594,40.246)
C4: (-0.756,55.800,41.038)
P: (-4.489,56.605,46.233)
C4': (-0.675,55.818,45.850)
C2': (-0.350,57.373,44.060)
C2: (0.591,55.964,39.292)
N1: (-0.395,55.770,38.404)
N3: (0.511,55.994,40.625)
N6: (-2.639,55.390,37.958)
N7: (-3.006,55.434,41.023)
N9: (-1.212,55.769,42.332)
O5': (-3.060,56.110,45.718)
O3': (1.442,56.945,45.628)
C4: (5.771,59.741,42.600)
N3: (7.066,59.257,42.698)
OP1: (1.691,56.844,48.101)
OP2: (2.257,58.976,46.808)
C2: (7.470,58.072,43.268)
C1': (6.760,55.981,44.449)
C3': (6.535,56.250,46.771)
O5': (3.729,56.962,46.633)
O4': (5.556,55.339,44.838)
C5': (4.045,55.572,46.726)
P: (2.240,57.499,46.892)
C4': (5.469,55.276,46.283)
C2': (7.617,56.117,45.705)
O2': (8.458,54.991,45.864)
N1: (6.444,57.301,43.795)
O4: (5.569,60.822,42.058)
O2: (8.647,57.755,43.293)
C6: (5.125,57.732,43.732)
C5: (4.756,58.890,43.171)
O3': (7.004,55.873,48.046)
Image (generated by PyMOL):
PyMOL image
show in jmol