Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:H9:H10
Extra
PDB:
ATOM 1 O3' G A 8 -9.696 13.413 101.109 1.00 28.15 O
ATOM 2 P A A 9 -10.659 12.966 102.317 1.00 28.63 P
ATOM 3 OP1 A A 9 -12.036 13.410 101.929 1.00 30.12 O
ATOM 4 OP2 A A 9 -10.358 11.533 102.526 1.00 27.93 O
ATOM 5 O5' A A 9 -10.128 13.850 103.527 1.00 28.48 O
ATOM 6 C5' A A 9 -10.753 13.837 104.800 1.00 28.98 C
ATOM 7 C4' A A 9 -10.777 15.198 105.443 1.00 29.84 C
ATOM 8 O4' A A 9 -11.570 15.084 106.649 1.00 30.62 O
ATOM 9 C3' A A 9 -9.432 15.779 105.881 1.00 29.27 C
ATOM 10 O3' A A 9 -9.472 17.215 105.808 1.00 31.40 O
ATOM 11 C2' A A 9 -9.349 15.341 107.343 1.00 29.16 C
ATOM 12 O2' A A 9 -8.516 16.134 108.161 1.00 30.42 O
ATOM 13 C1' A A 9 -10.805 15.490 107.763 1.00 30.44 C
ATOM 14 N9 A A 9 -11.180 14.693 108.930 1.00 30.36 N
ATOM 15 C8 A A 9 -11.576 15.149 110.147 1.00 32.34 C
ATOM 16 N7 A A 9 -11.835 14.200 111.008 1.00 31.01 N
ATOM 17 C5 A A 9 -11.584 13.040 110.303 1.00 29.72 C
ATOM 18 C6 A A 9 -11.666 11.682 110.652 1.00 28.91 C
ATOM 19 N6 A A 9 -12.033 11.205 111.844 1.00 29.08 N
ATOM 20 N1 A A 9 -11.348 10.789 109.716 1.00 28.04 N
ATOM 21 C2 A A 9 -10.985 11.247 108.519 1.00 27.93 C
ATOM 22 N3 A A 9 -10.869 12.486 108.076 1.00 28.48 N
ATOM 23 C4 A A 9 -11.189 13.342 109.030 1.00 29.39 C
ATOM 24 P U A 10 -8.618 18.114 104.772 1.00 33.07 P
ATOM 25 OP1 U A 10 -8.777 19.536 105.121 1.00 39.32 O
ATOM 26 OP2 U A 10 -9.068 17.615 103.469 1.00 29.95 O
ATOM 27 O5' U A 10 -7.106 17.703 104.991 1.00 30.51 O
TER
ATOM 1 O3' A B 9 -9.472 17.215 105.808 1.00 31.40 O
ATOM 2 P U B 10 -8.618 18.114 104.772 1.00 33.07 P
ATOM 3 OP1 U B 10 -8.777 19.536 105.121 1.00 39.32 O
ATOM 4 OP2 U B 10 -9.068 17.615 103.469 1.00 29.95 O
ATOM 5 O5' U B 10 -7.106 17.703 104.991 1.00 30.51 O
ATOM 6 C5' U B 10 -6.347 18.443 105.927 1.00 34.29 C
ATOM 7 C4' U B 10 -4.902 18.029 105.955 1.00 32.74 C
ATOM 8 O4' U B 10 -4.818 16.619 106.242 1.00 28.15 O
ATOM 9 C3' U B 10 -4.129 18.177 104.662 1.00 32.13 C
ATOM 10 O3' U B 10 -3.679 19.492 104.461 1.00 39.35 O
ATOM 11 C2' U B 10 -2.995 17.182 104.831 1.00 28.19 C
ATOM 12 O2' U B 10 -2.000 17.682 105.711 1.00 31.83 O
ATOM 13 C1' U B 10 -3.721 16.055 105.553 1.00 27.55 C
ATOM 14 N1 U B 10 -4.211 14.960 104.681 1.00 26.74 N
ATOM 15 C2 U B 10 -3.342 13.933 104.456 1.00 26.23 C
ATOM 16 O2 U B 10 -2.219 13.944 104.922 1.00 26.47 O
ATOM 17 N3 U B 10 -3.828 12.927 103.682 1.00 25.77 N
ATOM 18 C4 U B 10 -5.084 12.862 103.139 1.00 25.82 C
ATOM 19 O4 U B 10 -5.397 11.897 102.446 1.00 25.65 O
ATOM 20 C5 U B 10 -5.925 13.961 103.427 1.00 26.39 C
ATOM 21 C6 U B 10 -5.476 14.950 104.177 1.00 26.81 C
ATOM 22 P U B 11 -3.991 20.195 103.084 1.00 44.70 P
ATOM 23 OP1 U B 11 -5.280 19.766 102.504 1.00 35.51 O
ATOM 24 OP2 U B 11 -3.733 21.621 103.329 1.00 45.84 O
ATOM 25 O5' U B 11 -2.852 19.513 102.269 1.00 33.98 O
TER
ATOM 2 P A A 9 -10.659 12.966 102.317 1.00 28.63 P
ATOM 3 OP1 A A 9 -12.036 13.410 101.929 1.00 30.12 O
ATOM 4 OP2 A A 9 -10.358 11.533 102.526 1.00 27.93 O
ATOM 5 O5' A A 9 -10.128 13.850 103.527 1.00 28.48 O
ATOM 6 C5' A A 9 -10.753 13.837 104.800 1.00 28.98 C
ATOM 7 C4' A A 9 -10.777 15.198 105.443 1.00 29.84 C
ATOM 8 O4' A A 9 -11.570 15.084 106.649 1.00 30.62 O
ATOM 9 C3' A A 9 -9.432 15.779 105.881 1.00 29.27 C
ATOM 10 O3' A A 9 -9.472 17.215 105.808 1.00 31.40 O
ATOM 11 C2' A A 9 -9.349 15.341 107.343 1.00 29.16 C
ATOM 12 O2' A A 9 -8.516 16.134 108.161 1.00 30.42 O
ATOM 13 C1' A A 9 -10.805 15.490 107.763 1.00 30.44 C
ATOM 14 N9 A A 9 -11.180 14.693 108.930 1.00 30.36 N
ATOM 15 C8 A A 9 -11.576 15.149 110.147 1.00 32.34 C
ATOM 16 N7 A A 9 -11.835 14.200 111.008 1.00 31.01 N
ATOM 17 C5 A A 9 -11.584 13.040 110.303 1.00 29.72 C
ATOM 18 C6 A A 9 -11.666 11.682 110.652 1.00 28.91 C
ATOM 19 N6 A A 9 -12.033 11.205 111.844 1.00 29.08 N
ATOM 20 N1 A A 9 -11.348 10.789 109.716 1.00 28.04 N
ATOM 21 C2 A A 9 -10.985 11.247 108.519 1.00 27.93 C
ATOM 22 N3 A A 9 -10.869 12.486 108.076 1.00 28.48 N
ATOM 23 C4 A A 9 -11.189 13.342 109.030 1.00 29.39 C
ATOM 24 P U A 10 -8.618 18.114 104.772 1.00 33.07 P
ATOM 25 OP1 U A 10 -8.777 19.536 105.121 1.00 39.32 O
ATOM 26 OP2 U A 10 -9.068 17.615 103.469 1.00 29.95 O
ATOM 27 O5' U A 10 -7.106 17.703 104.991 1.00 30.51 O
TER
ATOM 1 O3' A B 9 -9.472 17.215 105.808 1.00 31.40 O
ATOM 2 P U B 10 -8.618 18.114 104.772 1.00 33.07 P
ATOM 3 OP1 U B 10 -8.777 19.536 105.121 1.00 39.32 O
ATOM 4 OP2 U B 10 -9.068 17.615 103.469 1.00 29.95 O
ATOM 5 O5' U B 10 -7.106 17.703 104.991 1.00 30.51 O
ATOM 6 C5' U B 10 -6.347 18.443 105.927 1.00 34.29 C
ATOM 7 C4' U B 10 -4.902 18.029 105.955 1.00 32.74 C
ATOM 8 O4' U B 10 -4.818 16.619 106.242 1.00 28.15 O
ATOM 9 C3' U B 10 -4.129 18.177 104.662 1.00 32.13 C
ATOM 10 O3' U B 10 -3.679 19.492 104.461 1.00 39.35 O
ATOM 11 C2' U B 10 -2.995 17.182 104.831 1.00 28.19 C
ATOM 12 O2' U B 10 -2.000 17.682 105.711 1.00 31.83 O
ATOM 13 C1' U B 10 -3.721 16.055 105.553 1.00 27.55 C
ATOM 14 N1 U B 10 -4.211 14.960 104.681 1.00 26.74 N
ATOM 15 C2 U B 10 -3.342 13.933 104.456 1.00 26.23 C
ATOM 16 O2 U B 10 -2.219 13.944 104.922 1.00 26.47 O
ATOM 17 N3 U B 10 -3.828 12.927 103.682 1.00 25.77 N
ATOM 18 C4 U B 10 -5.084 12.862 103.139 1.00 25.82 C
ATOM 19 O4 U B 10 -5.397 11.897 102.446 1.00 25.65 O
ATOM 20 C5 U B 10 -5.925 13.961 103.427 1.00 26.39 C
ATOM 21 C6 U B 10 -5.476 14.950 104.177 1.00 26.81 C
ATOM 22 P U B 11 -3.991 20.195 103.084 1.00 44.70 P
ATOM 23 OP1 U B 11 -5.280 19.766 102.504 1.00 35.51 O
ATOM 24 OP2 U B 11 -3.733 21.621 103.329 1.00 45.84 O
ATOM 25 O5' U B 11 -2.852 19.513 102.269 1.00 33.98 O
TER
Atoms:
OP1: (-12.036,13.410,101.929)
OP2: (-10.358,11.533,102.526)
C3': (-9.432,15.779,105.881)
C1': (-10.805,15.490,107.763)
C5': (-10.753,13.837,104.800)
O4': (-11.570,15.084,106.649)
C8: (-11.576,15.149,110.147)
O2': (-8.516,16.134,108.161)
C6: (-11.666,11.682,110.652)
C5: (-11.584,13.040,110.303)
C4: (-11.189,13.342,109.030)
P: (-10.659,12.966,102.317)
C4': (-10.777,15.198,105.443)
C2': (-9.349,15.341,107.343)
C2: (-10.985,11.247,108.519)
N1: (-11.348,10.789,109.716)
N3: (-10.869,12.486,108.076)
N6: (-12.033,11.205,111.844)
N7: (-11.835,14.200,111.008)
N9: (-11.180,14.693,108.930)
O5': (-10.128,13.850,103.527)
O3': (-9.472,17.215,105.808)
OP2: (-10.358,11.533,102.526)
C3': (-9.432,15.779,105.881)
C1': (-10.805,15.490,107.763)
C5': (-10.753,13.837,104.800)
O4': (-11.570,15.084,106.649)
C8: (-11.576,15.149,110.147)
O2': (-8.516,16.134,108.161)
C6: (-11.666,11.682,110.652)
C5: (-11.584,13.040,110.303)
C4: (-11.189,13.342,109.030)
P: (-10.659,12.966,102.317)
C4': (-10.777,15.198,105.443)
C2': (-9.349,15.341,107.343)
C2: (-10.985,11.247,108.519)
N1: (-11.348,10.789,109.716)
N3: (-10.869,12.486,108.076)
N6: (-12.033,11.205,111.844)
N7: (-11.835,14.200,111.008)
N9: (-11.180,14.693,108.930)
O5': (-10.128,13.850,103.527)
O3': (-9.472,17.215,105.808)
C4: (-5.084,12.862,103.139)
N3: (-3.828,12.927,103.682)
OP1: (-8.777,19.536,105.121)
OP2: (-9.068,17.615,103.469)
C2: (-3.342,13.933,104.456)
C1': (-3.721,16.055,105.553)
C3': (-4.129,18.177,104.662)
O5': (-7.106,17.703,104.991)
O4': (-4.818,16.619,106.242)
C5': (-6.347,18.443,105.927)
P: (-8.618,18.114,104.772)
C4': (-4.902,18.029,105.955)
C2': (-2.995,17.182,104.831)
O2': (-2.000,17.682,105.711)
N1: (-4.211,14.960,104.681)
O4: (-5.397,11.897,102.446)
O2: (-2.219,13.944,104.922)
C6: (-5.476,14.950,104.177)
C5: (-5.925,13.961,103.427)
O3': (-3.679,19.492,104.461)
N3: (-3.828,12.927,103.682)
OP1: (-8.777,19.536,105.121)
OP2: (-9.068,17.615,103.469)
C2: (-3.342,13.933,104.456)
C1': (-3.721,16.055,105.553)
C3': (-4.129,18.177,104.662)
O5': (-7.106,17.703,104.991)
O4': (-4.818,16.619,106.242)
C5': (-6.347,18.443,105.927)
P: (-8.618,18.114,104.772)
C4': (-4.902,18.029,105.955)
C2': (-2.995,17.182,104.831)
O2': (-2.000,17.682,105.711)
N1: (-4.211,14.960,104.681)
O4: (-5.397,11.897,102.446)
O2: (-2.219,13.944,104.922)
C6: (-5.476,14.950,104.177)
C5: (-5.925,13.961,103.427)
O3': (-3.679,19.492,104.461)
Image (generated by PyMOL):