Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XDB:G9:G10
Extra
PDB:
ATOM 1 O3' G A 8 -12.839 16.448 18.344 1.00 41.90 O
ATOM 2 P A A 9 -13.000 18.054 18.342 1.00 52.49 P
ATOM 3 OP1 A A 9 -12.150 18.679 19.387 1.00 47.56 O
ATOM 4 OP2 A A 9 -12.849 18.511 16.943 1.00 50.38 O
ATOM 5 O5' A A 9 -14.524 18.065 18.769 1.00 54.97 O
ATOM 6 C5' A A 9 -15.204 19.267 19.069 1.00 51.79 C
ATOM 7 C4' A A 9 -16.278 19.055 20.102 1.00 51.05 C
ATOM 8 O4' A A 9 -16.834 20.362 20.378 1.00 51.25 O
ATOM 9 C3' A A 9 -17.453 18.169 19.683 1.00 49.11 C
ATOM 10 O3' A A 9 -18.050 17.557 20.827 1.00 56.60 O
ATOM 11 C2' A A 9 -18.454 19.182 19.159 1.00 48.07 C
ATOM 12 O2' A A 9 -19.784 18.733 19.270 1.00 52.72 O
ATOM 13 C1' A A 9 -18.210 20.353 20.099 1.00 48.10 C
ATOM 14 N9 A A 9 -18.550 21.659 19.549 1.00 56.38 N
ATOM 15 C8 A A 9 -19.398 22.579 20.107 1.00 60.67 C
ATOM 16 N7 A A 9 -19.517 23.671 19.395 1.00 60.24 N
ATOM 17 C5 A A 9 -18.692 23.462 18.302 1.00 55.23 C
ATOM 18 C6 A A 9 -18.393 24.264 17.186 1.00 53.69 C
ATOM 19 N6 A A 9 -18.905 25.484 16.983 1.00 49.21 N
ATOM 20 N1 A A 9 -17.536 23.752 16.278 1.00 54.12 N
ATOM 21 C2 A A 9 -17.029 22.534 16.508 1.00 55.18 C
ATOM 22 N3 A A 9 -17.230 21.687 17.517 1.00 54.79 N
ATOM 23 C4 A A 9 -18.084 22.222 18.391 1.00 55.66 C
ATOM 24 P U A 10 -17.827 16.020 21.257 1.00 54.73 P
ATOM 25 OP1 U A 10 -18.503 15.791 22.540 1.00 52.44 O
ATOM 26 OP2 U A 10 -16.379 15.744 21.169 1.00 51.59 O
ATOM 27 O5' U A 10 -18.657 15.281 20.143 1.00 51.99 O
TER
ATOM 1 O3' A B 9 -18.050 17.557 20.827 1.00 56.60 O
ATOM 2 P U B 10 -17.827 16.020 21.257 1.00 54.73 P
ATOM 3 OP1 U B 10 -18.503 15.791 22.540 1.00 52.44 O
ATOM 4 OP2 U B 10 -16.379 15.744 21.169 1.00 51.59 O
ATOM 5 O5' U B 10 -18.657 15.281 20.143 1.00 51.99 O
ATOM 6 C5' U B 10 -20.068 15.328 20.224 1.00 51.35 C
ATOM 7 C4' U B 10 -20.660 14.495 19.122 1.00 59.49 C
ATOM 8 O4' U B 10 -20.299 15.076 17.848 1.00 66.00 O
ATOM 9 C3' U B 10 -20.151 13.065 19.047 1.00 56.96 C
ATOM 10 O3' U B 10 -20.897 12.199 19.877 1.00 58.97 O
ATOM 11 C2' U B 10 -20.284 12.709 17.574 1.00 60.40 C
ATOM 12 O2' U B 10 -21.615 12.322 17.276 1.00 59.89 O
ATOM 13 C1' U B 10 -20.044 14.058 16.907 1.00 63.18 C
ATOM 14 N1 U B 10 -18.713 14.289 16.321 1.00 52.76 N
ATOM 15 C2 U B 10 -18.561 13.815 15.050 1.00 54.84 C
ATOM 16 O2 U B 10 -19.463 13.217 14.484 1.00 58.89 O
ATOM 17 N3 U B 10 -17.337 14.060 14.488 1.00 47.62 N
ATOM 18 C4 U B 10 -16.292 14.736 15.065 1.00 45.96 C
ATOM 19 O4 U B 10 -15.251 14.881 14.426 1.00 50.07 O
ATOM 20 C5 U B 10 -16.539 15.204 16.390 1.00 43.99 C
ATOM 21 C6 U B 10 -17.722 14.978 16.961 1.00 44.96 C
ATOM 22 P U B 11 -20.170 11.226 20.922 1.00 68.24 P
ATOM 23 OP1 U B 11 -19.155 11.990 21.678 1.00 65.74 O
ATOM 24 OP2 U B 11 -21.352 10.656 21.616 1.00 67.36 O
ATOM 25 O5' U B 11 -19.424 10.160 19.995 1.00 60.42 O
TER
ATOM 2 P A A 9 -13.000 18.054 18.342 1.00 52.49 P
ATOM 3 OP1 A A 9 -12.150 18.679 19.387 1.00 47.56 O
ATOM 4 OP2 A A 9 -12.849 18.511 16.943 1.00 50.38 O
ATOM 5 O5' A A 9 -14.524 18.065 18.769 1.00 54.97 O
ATOM 6 C5' A A 9 -15.204 19.267 19.069 1.00 51.79 C
ATOM 7 C4' A A 9 -16.278 19.055 20.102 1.00 51.05 C
ATOM 8 O4' A A 9 -16.834 20.362 20.378 1.00 51.25 O
ATOM 9 C3' A A 9 -17.453 18.169 19.683 1.00 49.11 C
ATOM 10 O3' A A 9 -18.050 17.557 20.827 1.00 56.60 O
ATOM 11 C2' A A 9 -18.454 19.182 19.159 1.00 48.07 C
ATOM 12 O2' A A 9 -19.784 18.733 19.270 1.00 52.72 O
ATOM 13 C1' A A 9 -18.210 20.353 20.099 1.00 48.10 C
ATOM 14 N9 A A 9 -18.550 21.659 19.549 1.00 56.38 N
ATOM 15 C8 A A 9 -19.398 22.579 20.107 1.00 60.67 C
ATOM 16 N7 A A 9 -19.517 23.671 19.395 1.00 60.24 N
ATOM 17 C5 A A 9 -18.692 23.462 18.302 1.00 55.23 C
ATOM 18 C6 A A 9 -18.393 24.264 17.186 1.00 53.69 C
ATOM 19 N6 A A 9 -18.905 25.484 16.983 1.00 49.21 N
ATOM 20 N1 A A 9 -17.536 23.752 16.278 1.00 54.12 N
ATOM 21 C2 A A 9 -17.029 22.534 16.508 1.00 55.18 C
ATOM 22 N3 A A 9 -17.230 21.687 17.517 1.00 54.79 N
ATOM 23 C4 A A 9 -18.084 22.222 18.391 1.00 55.66 C
ATOM 24 P U A 10 -17.827 16.020 21.257 1.00 54.73 P
ATOM 25 OP1 U A 10 -18.503 15.791 22.540 1.00 52.44 O
ATOM 26 OP2 U A 10 -16.379 15.744 21.169 1.00 51.59 O
ATOM 27 O5' U A 10 -18.657 15.281 20.143 1.00 51.99 O
TER
ATOM 1 O3' A B 9 -18.050 17.557 20.827 1.00 56.60 O
ATOM 2 P U B 10 -17.827 16.020 21.257 1.00 54.73 P
ATOM 3 OP1 U B 10 -18.503 15.791 22.540 1.00 52.44 O
ATOM 4 OP2 U B 10 -16.379 15.744 21.169 1.00 51.59 O
ATOM 5 O5' U B 10 -18.657 15.281 20.143 1.00 51.99 O
ATOM 6 C5' U B 10 -20.068 15.328 20.224 1.00 51.35 C
ATOM 7 C4' U B 10 -20.660 14.495 19.122 1.00 59.49 C
ATOM 8 O4' U B 10 -20.299 15.076 17.848 1.00 66.00 O
ATOM 9 C3' U B 10 -20.151 13.065 19.047 1.00 56.96 C
ATOM 10 O3' U B 10 -20.897 12.199 19.877 1.00 58.97 O
ATOM 11 C2' U B 10 -20.284 12.709 17.574 1.00 60.40 C
ATOM 12 O2' U B 10 -21.615 12.322 17.276 1.00 59.89 O
ATOM 13 C1' U B 10 -20.044 14.058 16.907 1.00 63.18 C
ATOM 14 N1 U B 10 -18.713 14.289 16.321 1.00 52.76 N
ATOM 15 C2 U B 10 -18.561 13.815 15.050 1.00 54.84 C
ATOM 16 O2 U B 10 -19.463 13.217 14.484 1.00 58.89 O
ATOM 17 N3 U B 10 -17.337 14.060 14.488 1.00 47.62 N
ATOM 18 C4 U B 10 -16.292 14.736 15.065 1.00 45.96 C
ATOM 19 O4 U B 10 -15.251 14.881 14.426 1.00 50.07 O
ATOM 20 C5 U B 10 -16.539 15.204 16.390 1.00 43.99 C
ATOM 21 C6 U B 10 -17.722 14.978 16.961 1.00 44.96 C
ATOM 22 P U B 11 -20.170 11.226 20.922 1.00 68.24 P
ATOM 23 OP1 U B 11 -19.155 11.990 21.678 1.00 65.74 O
ATOM 24 OP2 U B 11 -21.352 10.656 21.616 1.00 67.36 O
ATOM 25 O5' U B 11 -19.424 10.160 19.995 1.00 60.42 O
TER
Atoms:
OP1: (-12.150,18.679,19.387)
OP2: (-12.849,18.511,16.943)
C3': (-17.453,18.169,19.683)
C1': (-18.210,20.353,20.099)
C5': (-15.204,19.267,19.069)
O4': (-16.834,20.362,20.378)
C8: (-19.398,22.579,20.107)
O2': (-19.784,18.733,19.270)
C6: (-18.393,24.264,17.186)
C5: (-18.692,23.462,18.302)
C4: (-18.084,22.222,18.391)
P: (-13.000,18.054,18.342)
C4': (-16.278,19.055,20.102)
C2': (-18.454,19.182,19.159)
C2: (-17.029,22.534,16.508)
N1: (-17.536,23.752,16.278)
N3: (-17.230,21.687,17.517)
N6: (-18.905,25.484,16.983)
N7: (-19.517,23.671,19.395)
N9: (-18.550,21.659,19.549)
O5': (-14.524,18.065,18.769)
O3': (-18.050,17.557,20.827)
OP2: (-12.849,18.511,16.943)
C3': (-17.453,18.169,19.683)
C1': (-18.210,20.353,20.099)
C5': (-15.204,19.267,19.069)
O4': (-16.834,20.362,20.378)
C8: (-19.398,22.579,20.107)
O2': (-19.784,18.733,19.270)
C6: (-18.393,24.264,17.186)
C5: (-18.692,23.462,18.302)
C4: (-18.084,22.222,18.391)
P: (-13.000,18.054,18.342)
C4': (-16.278,19.055,20.102)
C2': (-18.454,19.182,19.159)
C2: (-17.029,22.534,16.508)
N1: (-17.536,23.752,16.278)
N3: (-17.230,21.687,17.517)
N6: (-18.905,25.484,16.983)
N7: (-19.517,23.671,19.395)
N9: (-18.550,21.659,19.549)
O5': (-14.524,18.065,18.769)
O3': (-18.050,17.557,20.827)
C4: (-16.292,14.736,15.065)
N3: (-17.337,14.060,14.488)
OP1: (-18.503,15.791,22.540)
OP2: (-16.379,15.744,21.169)
C2: (-18.561,13.815,15.050)
C1': (-20.044,14.058,16.907)
C3': (-20.151,13.065,19.047)
O5': (-18.657,15.281,20.143)
O4': (-20.299,15.076,17.848)
C5': (-20.068,15.328,20.224)
P: (-17.827,16.020,21.257)
C4': (-20.660,14.495,19.122)
C2': (-20.284,12.709,17.574)
O2': (-21.615,12.322,17.276)
N1: (-18.713,14.289,16.321)
O4: (-15.251,14.881,14.426)
O2: (-19.463,13.217,14.484)
C6: (-17.722,14.978,16.961)
C5: (-16.539,15.204,16.390)
O3': (-20.897,12.199,19.877)
N3: (-17.337,14.060,14.488)
OP1: (-18.503,15.791,22.540)
OP2: (-16.379,15.744,21.169)
C2: (-18.561,13.815,15.050)
C1': (-20.044,14.058,16.907)
C3': (-20.151,13.065,19.047)
O5': (-18.657,15.281,20.143)
O4': (-20.299,15.076,17.848)
C5': (-20.068,15.328,20.224)
P: (-17.827,16.020,21.257)
C4': (-20.660,14.495,19.122)
C2': (-20.284,12.709,17.574)
O2': (-21.615,12.322,17.276)
N1: (-18.713,14.289,16.321)
O4: (-15.251,14.881,14.426)
O2: (-19.463,13.217,14.484)
C6: (-17.722,14.978,16.961)
C5: (-16.539,15.204,16.390)
O3': (-20.897,12.199,19.877)
Image (generated by PyMOL):