ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:P41:P42

Extra

PDB:
ATOM 1 O3' U A 40 14.903 40.073 1.006 1.00 81.78 O
ATOM 2 P A A 41 15.693 40.069 2.406 1.00 80.53 P
ATOM 3 OP1 A A 41 17.121 39.805 2.111 1.00 80.37 O
ATOM 4 OP2 A A 41 14.984 39.188 3.360 1.00 80.35 O
ATOM 5 O5' A A 41 15.537 41.582 2.900 1.00 78.66 O
ATOM 6 C5' A A 41 16.208 42.638 2.226 1.00 75.99 C
ATOM 7 C4' A A 41 17.007 43.455 3.222 1.00 73.99 C
ATOM 8 O4' A A 41 16.142 43.883 4.303 1.00 73.36 O
ATOM 9 C3' A A 41 18.164 42.716 3.885 1.00 72.80 C
ATOM 10 O3' A A 41 19.328 43.517 3.779 1.00 71.52 O
ATOM 11 C2' A A 41 17.716 42.563 5.339 1.00 72.82 C
ATOM 12 O2' A A 41 18.796 42.557 6.254 1.00 73.17 O
ATOM 13 C1' A A 41 16.883 43.826 5.499 1.00 72.50 C
ATOM 14 N9 A A 41 15.963 43.837 6.633 1.00 71.72 N
ATOM 15 C8 A A 41 14.615 43.606 6.605 1.00 71.58 C
ATOM 16 N7 A A 41 14.034 43.691 7.779 1.00 71.37 N
ATOM 17 C5 A A 41 15.073 44.000 8.636 1.00 71.08 C
ATOM 18 C6 A A 41 15.119 44.225 10.026 1.00 70.97 C
ATOM 19 N6 A A 41 14.038 44.160 10.806 1.00 71.00 N
ATOM 20 N1 A A 41 16.318 44.515 10.585 1.00 71.06 N
ATOM 21 C2 A A 41 17.400 44.578 9.794 1.00 71.22 C
ATOM 22 N3 A A 41 17.478 44.385 8.473 1.00 71.24 N
ATOM 23 C4 A A 41 16.271 44.098 7.949 1.00 71.32 C
ATOM 24 P U A 42 20.720 42.867 3.343 1.00 70.55 P
ATOM 25 OP1 U A 42 20.700 42.724 1.869 1.00 70.22 O
ATOM 26 OP2 U A 42 20.977 41.696 4.214 1.00 70.59 O
ATOM 27 O5' U A 42 21.787 43.988 3.735 1.00 68.99 O
TER

ATOM 1 O3' A B 41 19.328 43.517 3.779 1.00 71.52 O
ATOM 2 P U B 42 20.720 42.867 3.343 1.00 70.55 P
ATOM 3 OP1 U B 42 20.700 42.724 1.869 1.00 70.22 O
ATOM 4 OP2 U B 42 20.977 41.696 4.214 1.00 70.59 O
ATOM 5 O5' U B 42 21.787 43.988 3.735 1.00 68.99 O
ATOM 6 C5' U B 42 21.588 45.350 3.390 1.00 66.78 C
ATOM 7 C4' U B 42 22.603 46.213 4.109 1.00 65.22 C
ATOM 8 O4' U B 42 22.362 46.174 5.540 1.00 64.66 O
ATOM 9 C3' U B 42 24.043 45.739 3.981 1.00 64.43 C
ATOM 10 O3' U B 42 24.609 46.091 2.719 1.00 63.19 O
ATOM 11 C2' U B 42 24.679 46.458 5.165 1.00 64.57 C
ATOM 12 O2' U B 42 24.896 47.838 4.948 1.00 65.04 O
ATOM 13 C1' U B 42 23.601 46.257 6.231 1.00 64.70 C
ATOM 14 N1 U B 42 23.839 45.030 7.084 1.00 64.56 N
ATOM 15 C2 U B 42 24.943 44.975 7.928 1.00 64.61 C
ATOM 16 O2 U B 42 25.766 45.870 8.050 1.00 64.70 O
ATOM 17 N3 U B 42 25.062 43.810 8.649 1.00 64.53 N
ATOM 18 C4 U B 42 24.218 42.714 8.620 1.00 64.30 C
ATOM 19 O4 U B 42 24.464 41.746 9.328 1.00 64.28 O
ATOM 20 C5 U B 42 23.096 42.835 7.723 1.00 64.37 C
ATOM 21 C6 U B 42 22.955 43.962 7.009 1.00 64.61 C
ATOM 22 P C B 43 25.595 45.067 1.978 1.00 62.28 P
ATOM 23 OP1 C B 43 25.987 45.640 0.671 1.00 61.95 O
ATOM 24 OP2 C B 43 24.970 43.726 1.997 1.00 62.71 O
ATOM 25 O5' C B 43 26.866 45.067 2.954 1.00 61.41 O
TER

Atoms:
OP1: (17.121,39.805,2.111)
OP2: (14.984,39.188,3.360)
C3': (18.164,42.716,3.885)
C1': (16.883,43.826,5.499)
C5': (16.208,42.638,2.226)
O4': (16.142,43.883,4.303)
C8: (14.615,43.606,6.605)
O2': (18.796,42.557,6.254)
C6: (15.119,44.225,10.026)
C5: (15.073,44.000,8.636)
C4: (16.271,44.098,7.949)
P: (15.693,40.069,2.406)
C4': (17.007,43.455,3.222)
C2': (17.716,42.563,5.339)
C2: (17.400,44.578,9.794)
N1: (16.318,44.515,10.585)
N3: (17.478,44.385,8.473)
N6: (14.038,44.160,10.806)
N7: (14.034,43.691,7.779)
N9: (15.963,43.837,6.633)
O5': (15.537,41.582,2.900)
O3': (19.328,43.517,3.779)
C4: (24.218,42.714,8.620)
N3: (25.062,43.810,8.649)
OP1: (20.700,42.724,1.869)
OP2: (20.977,41.696,4.214)
C2: (24.943,44.975,7.928)
C1': (23.601,46.257,6.231)
C3': (24.043,45.739,3.981)
O5': (21.787,43.988,3.735)
O4': (22.362,46.174,5.540)
C5': (21.588,45.350,3.390)
P: (20.720,42.867,3.343)
C4': (22.603,46.213,4.109)
C2': (24.679,46.458,5.165)
O2': (24.896,47.838,4.948)
N1: (23.839,45.030,7.084)
O4: (24.464,41.746,9.328)
O2: (25.766,45.870,8.050)
C6: (22.955,43.962,7.009)
C5: (23.096,42.835,7.723)
O3': (24.609,46.091,2.719)
Image (generated by PyMOL):
PyMOL image
show in jmol