Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A10:A29
Extra
PDB:
ATOM 1 O3' G A 9 -13.989 -16.273 14.475 1.00 43.47 O
ATOM 2 P G A 10 -13.820 -17.853 14.714 1.00 36.09 P
ATOM 3 OP1 G A 10 -13.242 -18.346 13.436 1.00 41.87 O
ATOM 4 OP2 G A 10 -15.157 -18.352 15.206 1.00 38.85 O
ATOM 5 O5' G A 10 -12.766 -18.088 15.870 1.00 37.20 O
ATOM 6 C5' G A 10 -11.500 -17.551 15.812 1.00 37.26 C
ATOM 7 C4' G A 10 -10.913 -17.612 17.221 1.00 37.28 C
ATOM 8 O4' G A 10 -11.500 -16.600 18.093 1.00 32.37 O
ATOM 9 C3' G A 10 -11.101 -18.900 17.974 1.00 36.00 C
ATOM 10 O3' G A 10 -9.956 -19.700 17.704 1.00 36.38 O
ATOM 11 C2' G A 10 -10.951 -18.370 19.401 1.00 36.92 C
ATOM 12 O2' G A 10 -9.618 -18.044 19.672 1.00 36.55 O
ATOM 13 C1' G A 10 -11.679 -17.059 19.388 1.00 32.92 C
ATOM 14 N9 G A 10 -13.108 -17.181 19.629 1.00 34.19 N
ATOM 15 C8 G A 10 -14.054 -17.665 18.771 1.00 38.29 C
ATOM 16 N7 G A 10 -15.256 -17.668 19.268 1.00 36.33 N
ATOM 17 C5 G A 10 -15.099 -17.164 20.548 1.00 36.20 C
ATOM 18 C6 G A 10 -16.040 -16.913 21.578 1.00 38.44 C
ATOM 19 O6 G A 10 -17.255 -17.073 21.606 1.00 38.41 O
ATOM 20 N1 G A 10 -15.446 -16.398 22.716 1.00 39.22 N
ATOM 21 C2 G A 10 -14.127 -16.133 22.881 1.00 38.77 C
ATOM 22 N2 G A 10 -13.791 -15.612 24.068 1.00 41.82 N
ATOM 23 N3 G A 10 -13.220 -16.321 21.928 1.00 37.35 N
ATOM 24 C4 G A 10 -13.779 -16.858 20.788 1.00 36.58 C
ATOM 25 P U A 11 -10.052 -21.305 17.493 1.00 39.46 P
ATOM 26 OP1 U A 11 -8.743 -21.789 16.999 1.00 36.46 O
ATOM 27 OP2 U A 11 -11.396 -21.647 16.922 1.00 29.92 O
ATOM 28 O5' U A 11 -10.162 -21.690 19.032 1.00 37.06 O
TER
ATOM 1 O3' A B 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 2 P G B 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 3 OP1 G B 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 4 OP2 G B 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 5 O5' G B 29 -10.625 -14.143 30.280 1.00 42.69 O
ATOM 6 C5' G B 29 -12.069 -14.176 30.476 1.00 44.75 C
ATOM 7 C4' G B 29 -12.660 -14.786 29.232 1.00 45.04 C
ATOM 8 O4' G B 29 -12.341 -13.923 28.101 1.00 43.91 O
ATOM 9 C3' G B 29 -11.977 -16.094 28.860 1.00 45.48 C
ATOM 10 O3' G B 29 -12.643 -17.101 29.561 1.00 50.74 O
ATOM 11 C2' G B 29 -12.263 -16.154 27.358 1.00 44.48 C
ATOM 12 O2' G B 29 -13.630 -16.305 27.081 1.00 45.05 O
ATOM 13 C1' G B 29 -11.981 -14.697 26.959 1.00 44.69 C
ATOM 14 N9 G B 29 -10.639 -14.279 26.515 1.00 40.17 N
ATOM 15 C8 G B 29 -9.576 -13.917 27.276 1.00 44.00 C
ATOM 16 N7 G B 29 -8.515 -13.603 26.574 1.00 43.13 N
ATOM 17 C5 G B 29 -8.894 -13.750 25.282 1.00 36.62 C
ATOM 18 C6 G B 29 -8.193 -13.492 24.072 1.00 40.59 C
ATOM 19 O6 G B 29 -7.024 -13.092 23.885 1.00 37.31 O
ATOM 20 N1 G B 29 -9.014 -13.813 22.988 1.00 41.84 N
ATOM 21 C2 G B 29 -10.303 -14.265 23.065 1.00 37.46 C
ATOM 22 N2 G B 29 -10.947 -14.524 21.929 1.00 37.54 N
ATOM 23 N3 G B 29 -10.964 -14.466 24.180 1.00 42.63 N
ATOM 24 C4 G B 29 -10.198 -14.188 25.243 1.00 38.90 C
ATOM 25 P A B 30 -12.038 -18.554 29.862 1.00 43.28 P
ATOM 26 OP1 A B 30 -13.229 -19.268 30.294 1.00 47.92 O
ATOM 27 OP2 A B 30 -10.805 -18.549 30.690 1.00 47.14 O
ATOM 28 O5' A B 30 -11.590 -19.109 28.417 1.00 45.18 O
TER
ATOM 2 P G A 10 -13.820 -17.853 14.714 1.00 36.09 P
ATOM 3 OP1 G A 10 -13.242 -18.346 13.436 1.00 41.87 O
ATOM 4 OP2 G A 10 -15.157 -18.352 15.206 1.00 38.85 O
ATOM 5 O5' G A 10 -12.766 -18.088 15.870 1.00 37.20 O
ATOM 6 C5' G A 10 -11.500 -17.551 15.812 1.00 37.26 C
ATOM 7 C4' G A 10 -10.913 -17.612 17.221 1.00 37.28 C
ATOM 8 O4' G A 10 -11.500 -16.600 18.093 1.00 32.37 O
ATOM 9 C3' G A 10 -11.101 -18.900 17.974 1.00 36.00 C
ATOM 10 O3' G A 10 -9.956 -19.700 17.704 1.00 36.38 O
ATOM 11 C2' G A 10 -10.951 -18.370 19.401 1.00 36.92 C
ATOM 12 O2' G A 10 -9.618 -18.044 19.672 1.00 36.55 O
ATOM 13 C1' G A 10 -11.679 -17.059 19.388 1.00 32.92 C
ATOM 14 N9 G A 10 -13.108 -17.181 19.629 1.00 34.19 N
ATOM 15 C8 G A 10 -14.054 -17.665 18.771 1.00 38.29 C
ATOM 16 N7 G A 10 -15.256 -17.668 19.268 1.00 36.33 N
ATOM 17 C5 G A 10 -15.099 -17.164 20.548 1.00 36.20 C
ATOM 18 C6 G A 10 -16.040 -16.913 21.578 1.00 38.44 C
ATOM 19 O6 G A 10 -17.255 -17.073 21.606 1.00 38.41 O
ATOM 20 N1 G A 10 -15.446 -16.398 22.716 1.00 39.22 N
ATOM 21 C2 G A 10 -14.127 -16.133 22.881 1.00 38.77 C
ATOM 22 N2 G A 10 -13.791 -15.612 24.068 1.00 41.82 N
ATOM 23 N3 G A 10 -13.220 -16.321 21.928 1.00 37.35 N
ATOM 24 C4 G A 10 -13.779 -16.858 20.788 1.00 36.58 C
ATOM 25 P U A 11 -10.052 -21.305 17.493 1.00 39.46 P
ATOM 26 OP1 U A 11 -8.743 -21.789 16.999 1.00 36.46 O
ATOM 27 OP2 U A 11 -11.396 -21.647 16.922 1.00 29.92 O
ATOM 28 O5' U A 11 -10.162 -21.690 19.032 1.00 37.06 O
TER
ATOM 1 O3' A B 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 2 P G B 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 3 OP1 G B 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 4 OP2 G B 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 5 O5' G B 29 -10.625 -14.143 30.280 1.00 42.69 O
ATOM 6 C5' G B 29 -12.069 -14.176 30.476 1.00 44.75 C
ATOM 7 C4' G B 29 -12.660 -14.786 29.232 1.00 45.04 C
ATOM 8 O4' G B 29 -12.341 -13.923 28.101 1.00 43.91 O
ATOM 9 C3' G B 29 -11.977 -16.094 28.860 1.00 45.48 C
ATOM 10 O3' G B 29 -12.643 -17.101 29.561 1.00 50.74 O
ATOM 11 C2' G B 29 -12.263 -16.154 27.358 1.00 44.48 C
ATOM 12 O2' G B 29 -13.630 -16.305 27.081 1.00 45.05 O
ATOM 13 C1' G B 29 -11.981 -14.697 26.959 1.00 44.69 C
ATOM 14 N9 G B 29 -10.639 -14.279 26.515 1.00 40.17 N
ATOM 15 C8 G B 29 -9.576 -13.917 27.276 1.00 44.00 C
ATOM 16 N7 G B 29 -8.515 -13.603 26.574 1.00 43.13 N
ATOM 17 C5 G B 29 -8.894 -13.750 25.282 1.00 36.62 C
ATOM 18 C6 G B 29 -8.193 -13.492 24.072 1.00 40.59 C
ATOM 19 O6 G B 29 -7.024 -13.092 23.885 1.00 37.31 O
ATOM 20 N1 G B 29 -9.014 -13.813 22.988 1.00 41.84 N
ATOM 21 C2 G B 29 -10.303 -14.265 23.065 1.00 37.46 C
ATOM 22 N2 G B 29 -10.947 -14.524 21.929 1.00 37.54 N
ATOM 23 N3 G B 29 -10.964 -14.466 24.180 1.00 42.63 N
ATOM 24 C4 G B 29 -10.198 -14.188 25.243 1.00 38.90 C
ATOM 25 P A B 30 -12.038 -18.554 29.862 1.00 43.28 P
ATOM 26 OP1 A B 30 -13.229 -19.268 30.294 1.00 47.92 O
ATOM 27 OP2 A B 30 -10.805 -18.549 30.690 1.00 47.14 O
ATOM 28 O5' A B 30 -11.590 -19.109 28.417 1.00 45.18 O
TER
Atoms:
OP1: (-13.242,-18.346,13.436)
OP2: (-15.157,-18.352,15.206)
C3': (-11.101,-18.900,17.974)
C1': (-11.679,-17.059,19.388)
C5': (-11.500,-17.551,15.812)
O6: (-17.255,-17.073,21.606)
O4': (-11.500,-16.600,18.093)
C8: (-14.054,-17.665,18.771)
C2: (-14.127,-16.133,22.881)
C6: (-16.040,-16.913,21.578)
C5: (-15.099,-17.164,20.548)
C4: (-13.779,-16.858,20.788)
P: (-13.820,-17.853,14.714)
C4': (-10.913,-17.612,17.221)
C2': (-10.951,-18.370,19.401)
O2': (-9.618,-18.044,19.672)
N1: (-15.446,-16.398,22.716)
N2: (-13.791,-15.612,24.068)
N3: (-13.220,-16.321,21.928)
N7: (-15.256,-17.668,19.268)
N9: (-13.108,-17.181,19.629)
O5': (-12.766,-18.088,15.870)
O3': (-9.956,-19.700,17.704)
OP2: (-15.157,-18.352,15.206)
C3': (-11.101,-18.900,17.974)
C1': (-11.679,-17.059,19.388)
C5': (-11.500,-17.551,15.812)
O6: (-17.255,-17.073,21.606)
O4': (-11.500,-16.600,18.093)
C8: (-14.054,-17.665,18.771)
C2: (-14.127,-16.133,22.881)
C6: (-16.040,-16.913,21.578)
C5: (-15.099,-17.164,20.548)
C4: (-13.779,-16.858,20.788)
P: (-13.820,-17.853,14.714)
C4': (-10.913,-17.612,17.221)
C2': (-10.951,-18.370,19.401)
O2': (-9.618,-18.044,19.672)
N1: (-15.446,-16.398,22.716)
N2: (-13.791,-15.612,24.068)
N3: (-13.220,-16.321,21.928)
N7: (-15.256,-17.668,19.268)
N9: (-13.108,-17.181,19.629)
O5': (-12.766,-18.088,15.870)
O3': (-9.956,-19.700,17.704)
OP1: (-10.064,-13.780,32.713)
OP2: (-8.198,-13.541,30.978)
C3': (-11.977,-16.094,28.860)
C1': (-11.981,-14.697,26.959)
C5': (-12.069,-14.176,30.476)
O6: (-7.024,-13.092,23.885)
O4': (-12.341,-13.923,28.101)
C8: (-9.576,-13.917,27.276)
C2: (-10.303,-14.265,23.065)
C6: (-8.193,-13.492,24.072)
C5: (-8.894,-13.750,25.282)
C4: (-10.198,-14.188,25.243)
P: (-9.640,-13.435,31.351)
C4': (-12.660,-14.786,29.232)
C2': (-12.263,-16.154,27.358)
O2': (-13.630,-16.305,27.081)
N1: (-9.014,-13.813,22.988)
N2: (-10.947,-14.524,21.929)
N3: (-10.964,-14.466,24.180)
N7: (-8.515,-13.603,26.574)
N9: (-10.639,-14.279,26.515)
O5': (-10.625,-14.143,30.280)
O3': (-12.643,-17.101,29.561)
OP2: (-8.198,-13.541,30.978)
C3': (-11.977,-16.094,28.860)
C1': (-11.981,-14.697,26.959)
C5': (-12.069,-14.176,30.476)
O6: (-7.024,-13.092,23.885)
O4': (-12.341,-13.923,28.101)
C8: (-9.576,-13.917,27.276)
C2: (-10.303,-14.265,23.065)
C6: (-8.193,-13.492,24.072)
C5: (-8.894,-13.750,25.282)
C4: (-10.198,-14.188,25.243)
P: (-9.640,-13.435,31.351)
C4': (-12.660,-14.786,29.232)
C2': (-12.263,-16.154,27.358)
O2': (-13.630,-16.305,27.081)
N1: (-9.014,-13.813,22.988)
N2: (-10.947,-14.524,21.929)
N3: (-10.964,-14.466,24.180)
N7: (-8.515,-13.603,26.574)
N9: (-10.639,-14.279,26.515)
O5': (-10.625,-14.143,30.280)
O3': (-12.643,-17.101,29.561)
Image (generated by PyMOL):