Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B10:B29
Extra
PDB:
ATOM 1 O3' G A 9 -15.228 -39.223 12.223 1.00 39.56 O
ATOM 2 P G A 10 -14.969 -37.621 12.235 1.00 43.77 P
ATOM 3 OP1 G A 10 -14.281 -37.312 13.497 1.00 49.51 O
ATOM 4 OP2 G A 10 -16.224 -36.970 11.841 1.00 32.65 O
ATOM 5 O5' G A 10 -13.986 -37.279 11.006 1.00 42.19 O
ATOM 6 C5' G A 10 -12.780 -37.955 10.676 1.00 39.14 C
ATOM 7 C4' G A 10 -12.504 -37.952 9.162 1.00 37.41 C
ATOM 8 O4' G A 10 -13.403 -38.880 8.470 1.00 40.10 O
ATOM 9 C3' G A 10 -12.720 -36.662 8.441 1.00 40.04 C
ATOM 10 O3' G A 10 -11.554 -35.925 8.705 1.00 44.69 O
ATOM 11 C2' G A 10 -12.793 -37.199 6.997 1.00 45.11 C
ATOM 12 O2' G A 10 -11.533 -37.567 6.437 1.00 44.77 O
ATOM 13 C1' G A 10 -13.631 -38.469 7.160 1.00 37.54 C
ATOM 14 N9 G A 10 -15.065 -38.291 7.130 1.00 39.42 N
ATOM 15 C8 G A 10 -15.841 -37.814 8.155 1.00 42.29 C
ATOM 16 N7 G A 10 -17.121 -37.742 7.896 1.00 45.68 N
ATOM 17 C5 G A 10 -17.211 -38.244 6.596 1.00 49.56 C
ATOM 18 C6 G A 10 -18.345 -38.420 5.741 1.00 51.36 C
ATOM 19 O6 G A 10 -19.562 -38.186 5.931 1.00 50.76 O
ATOM 20 N1 G A 10 -17.942 -38.922 4.506 1.00 53.02 N
ATOM 21 C2 G A 10 -16.664 -39.222 4.116 1.00 53.28 C
ATOM 22 N2 G A 10 -16.530 -39.721 2.866 1.00 54.82 N
ATOM 23 N3 G A 10 -15.611 -39.080 4.905 1.00 49.10 N
ATOM 24 C4 G A 10 -15.948 -38.588 6.120 1.00 46.25 C
ATOM 25 P U A 11 -11.582 -34.297 8.761 1.00 40.40 P
ATOM 26 OP1 U A 11 -10.209 -33.915 9.118 1.00 44.47 O
ATOM 27 OP2 U A 11 -12.789 -33.889 9.514 1.00 42.66 O
ATOM 28 O5' U A 11 -11.789 -33.789 7.289 1.00 40.39 O
TER
ATOM 1 O3' A B 28 -14.034 -43.375 -4.821 1.00 57.94 O
ATOM 2 P G B 29 -13.351 -41.921 -5.038 1.00 62.69 P
ATOM 3 OP1 G B 29 -13.726 -41.473 -6.392 1.00 63.85 O
ATOM 4 OP2 G B 29 -11.909 -41.970 -4.714 1.00 61.09 O
ATOM 5 O5' G B 29 -14.121 -41.050 -3.936 1.00 54.82 O
ATOM 6 C5' G B 29 -15.520 -41.139 -3.826 1.00 55.55 C
ATOM 7 C4' G B 29 -15.959 -40.532 -2.523 1.00 57.17 C
ATOM 8 O4' G B 29 -15.696 -41.504 -1.472 1.00 53.36 O
ATOM 9 C3' G B 29 -15.247 -39.200 -2.151 1.00 52.46 C
ATOM 10 O3' G B 29 -15.991 -38.117 -2.669 1.00 57.08 O
ATOM 11 C2' G B 29 -15.379 -39.280 -0.639 1.00 53.94 C
ATOM 12 O2' G B 29 -16.691 -38.967 -0.267 1.00 57.25 O
ATOM 13 C1' G B 29 -15.196 -40.785 -0.350 1.00 55.51 C
ATOM 14 N9 G B 29 -13.817 -41.212 -0.133 1.00 49.54 N
ATOM 15 C8 G B 29 -12.882 -41.599 -1.067 1.00 52.26 C
ATOM 16 N7 G B 29 -11.736 -41.942 -0.552 1.00 50.82 N
ATOM 17 C5 G B 29 -11.933 -41.803 0.809 1.00 52.04 C
ATOM 18 C6 G B 29 -11.054 -41.998 1.897 1.00 49.30 C
ATOM 19 O6 G B 29 -9.892 -42.356 1.806 1.00 45.18 O
ATOM 20 N1 G B 29 -11.608 -41.692 3.146 1.00 45.66 N
ATOM 21 C2 G B 29 -12.897 -41.239 3.300 1.00 48.62 C
ATOM 22 N2 G B 29 -13.327 -40.963 4.545 1.00 45.98 N
ATOM 23 N3 G B 29 -13.736 -41.030 2.284 1.00 52.29 N
ATOM 24 C4 G B 29 -13.194 -41.322 1.082 1.00 52.21 C
ATOM 25 P A B 30 -15.389 -36.727 -3.219 1.00 59.56 P
ATOM 26 OP1 A B 30 -16.609 -35.889 -3.410 1.00 54.46 O
ATOM 27 OP2 A B 30 -14.439 -36.860 -4.349 1.00 63.24 O
ATOM 28 O5' A B 30 -14.534 -36.144 -1.968 1.00 53.15 O
TER
ATOM 2 P G A 10 -14.969 -37.621 12.235 1.00 43.77 P
ATOM 3 OP1 G A 10 -14.281 -37.312 13.497 1.00 49.51 O
ATOM 4 OP2 G A 10 -16.224 -36.970 11.841 1.00 32.65 O
ATOM 5 O5' G A 10 -13.986 -37.279 11.006 1.00 42.19 O
ATOM 6 C5' G A 10 -12.780 -37.955 10.676 1.00 39.14 C
ATOM 7 C4' G A 10 -12.504 -37.952 9.162 1.00 37.41 C
ATOM 8 O4' G A 10 -13.403 -38.880 8.470 1.00 40.10 O
ATOM 9 C3' G A 10 -12.720 -36.662 8.441 1.00 40.04 C
ATOM 10 O3' G A 10 -11.554 -35.925 8.705 1.00 44.69 O
ATOM 11 C2' G A 10 -12.793 -37.199 6.997 1.00 45.11 C
ATOM 12 O2' G A 10 -11.533 -37.567 6.437 1.00 44.77 O
ATOM 13 C1' G A 10 -13.631 -38.469 7.160 1.00 37.54 C
ATOM 14 N9 G A 10 -15.065 -38.291 7.130 1.00 39.42 N
ATOM 15 C8 G A 10 -15.841 -37.814 8.155 1.00 42.29 C
ATOM 16 N7 G A 10 -17.121 -37.742 7.896 1.00 45.68 N
ATOM 17 C5 G A 10 -17.211 -38.244 6.596 1.00 49.56 C
ATOM 18 C6 G A 10 -18.345 -38.420 5.741 1.00 51.36 C
ATOM 19 O6 G A 10 -19.562 -38.186 5.931 1.00 50.76 O
ATOM 20 N1 G A 10 -17.942 -38.922 4.506 1.00 53.02 N
ATOM 21 C2 G A 10 -16.664 -39.222 4.116 1.00 53.28 C
ATOM 22 N2 G A 10 -16.530 -39.721 2.866 1.00 54.82 N
ATOM 23 N3 G A 10 -15.611 -39.080 4.905 1.00 49.10 N
ATOM 24 C4 G A 10 -15.948 -38.588 6.120 1.00 46.25 C
ATOM 25 P U A 11 -11.582 -34.297 8.761 1.00 40.40 P
ATOM 26 OP1 U A 11 -10.209 -33.915 9.118 1.00 44.47 O
ATOM 27 OP2 U A 11 -12.789 -33.889 9.514 1.00 42.66 O
ATOM 28 O5' U A 11 -11.789 -33.789 7.289 1.00 40.39 O
TER
ATOM 1 O3' A B 28 -14.034 -43.375 -4.821 1.00 57.94 O
ATOM 2 P G B 29 -13.351 -41.921 -5.038 1.00 62.69 P
ATOM 3 OP1 G B 29 -13.726 -41.473 -6.392 1.00 63.85 O
ATOM 4 OP2 G B 29 -11.909 -41.970 -4.714 1.00 61.09 O
ATOM 5 O5' G B 29 -14.121 -41.050 -3.936 1.00 54.82 O
ATOM 6 C5' G B 29 -15.520 -41.139 -3.826 1.00 55.55 C
ATOM 7 C4' G B 29 -15.959 -40.532 -2.523 1.00 57.17 C
ATOM 8 O4' G B 29 -15.696 -41.504 -1.472 1.00 53.36 O
ATOM 9 C3' G B 29 -15.247 -39.200 -2.151 1.00 52.46 C
ATOM 10 O3' G B 29 -15.991 -38.117 -2.669 1.00 57.08 O
ATOM 11 C2' G B 29 -15.379 -39.280 -0.639 1.00 53.94 C
ATOM 12 O2' G B 29 -16.691 -38.967 -0.267 1.00 57.25 O
ATOM 13 C1' G B 29 -15.196 -40.785 -0.350 1.00 55.51 C
ATOM 14 N9 G B 29 -13.817 -41.212 -0.133 1.00 49.54 N
ATOM 15 C8 G B 29 -12.882 -41.599 -1.067 1.00 52.26 C
ATOM 16 N7 G B 29 -11.736 -41.942 -0.552 1.00 50.82 N
ATOM 17 C5 G B 29 -11.933 -41.803 0.809 1.00 52.04 C
ATOM 18 C6 G B 29 -11.054 -41.998 1.897 1.00 49.30 C
ATOM 19 O6 G B 29 -9.892 -42.356 1.806 1.00 45.18 O
ATOM 20 N1 G B 29 -11.608 -41.692 3.146 1.00 45.66 N
ATOM 21 C2 G B 29 -12.897 -41.239 3.300 1.00 48.62 C
ATOM 22 N2 G B 29 -13.327 -40.963 4.545 1.00 45.98 N
ATOM 23 N3 G B 29 -13.736 -41.030 2.284 1.00 52.29 N
ATOM 24 C4 G B 29 -13.194 -41.322 1.082 1.00 52.21 C
ATOM 25 P A B 30 -15.389 -36.727 -3.219 1.00 59.56 P
ATOM 26 OP1 A B 30 -16.609 -35.889 -3.410 1.00 54.46 O
ATOM 27 OP2 A B 30 -14.439 -36.860 -4.349 1.00 63.24 O
ATOM 28 O5' A B 30 -14.534 -36.144 -1.968 1.00 53.15 O
TER
Atoms:
OP1: (-14.281,-37.312,13.497)
OP2: (-16.224,-36.970,11.841)
C3': (-12.720,-36.662,8.441)
C1': (-13.631,-38.469,7.160)
C5': (-12.780,-37.955,10.676)
O6: (-19.562,-38.186,5.931)
O4': (-13.403,-38.880,8.470)
C8: (-15.841,-37.814,8.155)
C2: (-16.664,-39.222,4.116)
C6: (-18.345,-38.420,5.741)
C5: (-17.211,-38.244,6.596)
C4: (-15.948,-38.588,6.120)
P: (-14.969,-37.621,12.235)
C4': (-12.504,-37.952,9.162)
C2': (-12.793,-37.199,6.997)
O2': (-11.533,-37.567,6.437)
N1: (-17.942,-38.922,4.506)
N2: (-16.530,-39.721,2.866)
N3: (-15.611,-39.080,4.905)
N7: (-17.121,-37.742,7.896)
N9: (-15.065,-38.291,7.130)
O5': (-13.986,-37.279,11.006)
O3': (-11.554,-35.925,8.705)
OP2: (-16.224,-36.970,11.841)
C3': (-12.720,-36.662,8.441)
C1': (-13.631,-38.469,7.160)
C5': (-12.780,-37.955,10.676)
O6: (-19.562,-38.186,5.931)
O4': (-13.403,-38.880,8.470)
C8: (-15.841,-37.814,8.155)
C2: (-16.664,-39.222,4.116)
C6: (-18.345,-38.420,5.741)
C5: (-17.211,-38.244,6.596)
C4: (-15.948,-38.588,6.120)
P: (-14.969,-37.621,12.235)
C4': (-12.504,-37.952,9.162)
C2': (-12.793,-37.199,6.997)
O2': (-11.533,-37.567,6.437)
N1: (-17.942,-38.922,4.506)
N2: (-16.530,-39.721,2.866)
N3: (-15.611,-39.080,4.905)
N7: (-17.121,-37.742,7.896)
N9: (-15.065,-38.291,7.130)
O5': (-13.986,-37.279,11.006)
O3': (-11.554,-35.925,8.705)
OP1: (-13.726,-41.473,-6.392)
OP2: (-11.909,-41.970,-4.714)
C3': (-15.247,-39.200,-2.151)
C1': (-15.196,-40.785,-0.350)
C5': (-15.520,-41.139,-3.826)
O6: (-9.892,-42.356,1.806)
O4': (-15.696,-41.504,-1.472)
C8: (-12.882,-41.599,-1.067)
C2: (-12.897,-41.239,3.300)
C6: (-11.054,-41.998,1.897)
C5: (-11.933,-41.803,0.809)
C4: (-13.194,-41.322,1.082)
P: (-13.351,-41.921,-5.038)
C4': (-15.959,-40.532,-2.523)
C2': (-15.379,-39.280,-0.639)
O2': (-16.691,-38.967,-0.267)
N1: (-11.608,-41.692,3.146)
N2: (-13.327,-40.963,4.545)
N3: (-13.736,-41.030,2.284)
N7: (-11.736,-41.942,-0.552)
N9: (-13.817,-41.212,-0.133)
O5': (-14.121,-41.050,-3.936)
O3': (-15.991,-38.117,-2.669)
OP2: (-11.909,-41.970,-4.714)
C3': (-15.247,-39.200,-2.151)
C1': (-15.196,-40.785,-0.350)
C5': (-15.520,-41.139,-3.826)
O6: (-9.892,-42.356,1.806)
O4': (-15.696,-41.504,-1.472)
C8: (-12.882,-41.599,-1.067)
C2: (-12.897,-41.239,3.300)
C6: (-11.054,-41.998,1.897)
C5: (-11.933,-41.803,0.809)
C4: (-13.194,-41.322,1.082)
P: (-13.351,-41.921,-5.038)
C4': (-15.959,-40.532,-2.523)
C2': (-15.379,-39.280,-0.639)
O2': (-16.691,-38.967,-0.267)
N1: (-11.608,-41.692,3.146)
N2: (-13.327,-40.963,4.545)
N3: (-13.736,-41.030,2.284)
N7: (-11.736,-41.942,-0.552)
N9: (-13.817,-41.212,-0.133)
O5': (-14.121,-41.050,-3.936)
O3': (-15.991,-38.117,-2.669)
Image (generated by PyMOL):