Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A10:A29
Extra
PDB:
ATOM 1 O3' G A 9 -13.591 16.245 -14.624 1.00 28.74 O
ATOM 2 P G A 10 -13.480 17.839 -14.753 1.00 28.74 P
ATOM 3 OP1 G A 10 -12.821 18.338 -13.531 1.00 27.61 O
ATOM 4 OP2 G A 10 -14.802 18.369 -15.160 1.00 26.92 O
ATOM 5 O5' G A 10 -12.461 18.019 -15.969 1.00 27.40 O
ATOM 6 C5' G A 10 -11.132 17.538 -15.861 1.00 23.65 C
ATOM 7 C4' G A 10 -10.486 17.520 -17.233 1.00 30.79 C
ATOM 8 O4' G A 10 -11.182 16.551 -18.059 1.00 26.26 O
ATOM 9 C3' G A 10 -10.570 18.837 -17.995 1.00 25.94 C
ATOM 10 O3' G A 10 -9.433 19.650 -17.719 1.00 26.52 O
ATOM 11 C2' G A 10 -10.542 18.355 -19.437 1.00 28.08 C
ATOM 12 O2' G A 10 -9.227 18.046 -19.846 1.00 26.28 O
ATOM 13 C1' G A 10 -11.357 17.070 -19.364 1.00 25.92 C
ATOM 14 N9 G A 10 -12.788 17.231 -19.616 1.00 29.08 N
ATOM 15 C8 G A 10 -13.742 17.738 -18.761 1.00 31.54 C
ATOM 16 N7 G A 10 -14.945 17.747 -19.269 1.00 28.46 N
ATOM 17 C5 G A 10 -14.779 17.210 -20.542 1.00 30.15 C
ATOM 18 C6 G A 10 -15.727 16.971 -21.568 1.00 31.86 C
ATOM 19 O6 G A 10 -16.947 17.189 -21.559 1.00 35.25 O
ATOM 20 N1 G A 10 -15.135 16.419 -22.701 1.00 33.06 N
ATOM 21 C2 G A 10 -13.797 16.131 -22.830 1.00 32.14 C
ATOM 22 N2 G A 10 -13.409 15.601 -24.001 1.00 30.38 N
ATOM 23 N3 G A 10 -12.899 16.350 -21.878 1.00 28.11 N
ATOM 24 C4 G A 10 -13.458 16.888 -20.768 1.00 28.82 C
ATOM 25 P U A 11 -9.585 21.242 -17.587 1.00 29.79 P
ATOM 26 OP1 U A 11 -8.294 21.784 -17.108 1.00 28.73 O
ATOM 27 OP2 U A 11 -10.826 21.507 -16.829 1.00 30.07 O
ATOM 28 O5' U A 11 -9.799 21.739 -19.091 1.00 31.64 O
TER
ATOM 1 O3' A B 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 2 P G B 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 3 OP1 G B 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 4 OP2 G B 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 5 O5' G B 29 -10.265 14.181 -30.386 1.00 35.16 O
ATOM 6 C5' G B 29 -11.672 14.215 -30.566 1.00 37.12 C
ATOM 7 C4' G B 29 -12.332 14.804 -29.335 1.00 34.87 C
ATOM 8 O4' G B 29 -12.124 13.908 -28.216 1.00 37.40 O
ATOM 9 C3' G B 29 -11.767 16.148 -28.898 1.00 38.61 C
ATOM 10 O3' G B 29 -12.541 17.191 -29.471 1.00 34.00 O
ATOM 11 C2' G B 29 -11.941 16.122 -27.384 1.00 32.82 C
ATOM 12 O2' G B 29 -13.234 16.541 -27.006 1.00 34.12 O
ATOM 13 C1' G B 29 -11.792 14.643 -27.051 1.00 36.02 C
ATOM 14 N9 G B 29 -10.468 14.210 -26.609 1.00 33.28 N
ATOM 15 C8 G B 29 -9.427 13.786 -27.398 1.00 36.17 C
ATOM 16 N7 G B 29 -8.368 13.439 -26.719 1.00 34.26 N
ATOM 17 C5 G B 29 -8.731 13.639 -25.395 1.00 30.90 C
ATOM 18 C6 G B 29 -7.991 13.431 -24.207 1.00 29.22 C
ATOM 19 O6 G B 29 -6.828 13.018 -24.088 1.00 28.08 O
ATOM 20 N1 G B 29 -8.738 13.758 -23.077 1.00 29.58 N
ATOM 21 C2 G B 29 -10.031 14.226 -23.095 1.00 30.57 C
ATOM 22 N2 G B 29 -10.589 14.488 -21.905 1.00 26.90 N
ATOM 23 N3 G B 29 -10.734 14.425 -24.203 1.00 32.48 N
ATOM 24 C4 G B 29 -10.022 14.111 -25.311 1.00 31.64 C
ATOM 25 P A B 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 26 OP1 A B 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 27 OP2 A B 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 28 O5' A B 30 -11.176 19.119 -28.671 1.00 31.91 O
TER
ATOM 2 P G A 10 -13.480 17.839 -14.753 1.00 28.74 P
ATOM 3 OP1 G A 10 -12.821 18.338 -13.531 1.00 27.61 O
ATOM 4 OP2 G A 10 -14.802 18.369 -15.160 1.00 26.92 O
ATOM 5 O5' G A 10 -12.461 18.019 -15.969 1.00 27.40 O
ATOM 6 C5' G A 10 -11.132 17.538 -15.861 1.00 23.65 C
ATOM 7 C4' G A 10 -10.486 17.520 -17.233 1.00 30.79 C
ATOM 8 O4' G A 10 -11.182 16.551 -18.059 1.00 26.26 O
ATOM 9 C3' G A 10 -10.570 18.837 -17.995 1.00 25.94 C
ATOM 10 O3' G A 10 -9.433 19.650 -17.719 1.00 26.52 O
ATOM 11 C2' G A 10 -10.542 18.355 -19.437 1.00 28.08 C
ATOM 12 O2' G A 10 -9.227 18.046 -19.846 1.00 26.28 O
ATOM 13 C1' G A 10 -11.357 17.070 -19.364 1.00 25.92 C
ATOM 14 N9 G A 10 -12.788 17.231 -19.616 1.00 29.08 N
ATOM 15 C8 G A 10 -13.742 17.738 -18.761 1.00 31.54 C
ATOM 16 N7 G A 10 -14.945 17.747 -19.269 1.00 28.46 N
ATOM 17 C5 G A 10 -14.779 17.210 -20.542 1.00 30.15 C
ATOM 18 C6 G A 10 -15.727 16.971 -21.568 1.00 31.86 C
ATOM 19 O6 G A 10 -16.947 17.189 -21.559 1.00 35.25 O
ATOM 20 N1 G A 10 -15.135 16.419 -22.701 1.00 33.06 N
ATOM 21 C2 G A 10 -13.797 16.131 -22.830 1.00 32.14 C
ATOM 22 N2 G A 10 -13.409 15.601 -24.001 1.00 30.38 N
ATOM 23 N3 G A 10 -12.899 16.350 -21.878 1.00 28.11 N
ATOM 24 C4 G A 10 -13.458 16.888 -20.768 1.00 28.82 C
ATOM 25 P U A 11 -9.585 21.242 -17.587 1.00 29.79 P
ATOM 26 OP1 U A 11 -8.294 21.784 -17.108 1.00 28.73 O
ATOM 27 OP2 U A 11 -10.826 21.507 -16.829 1.00 30.07 O
ATOM 28 O5' U A 11 -9.799 21.739 -19.091 1.00 31.64 O
TER
ATOM 1 O3' A B 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 2 P G B 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 3 OP1 G B 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 4 OP2 G B 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 5 O5' G B 29 -10.265 14.181 -30.386 1.00 35.16 O
ATOM 6 C5' G B 29 -11.672 14.215 -30.566 1.00 37.12 C
ATOM 7 C4' G B 29 -12.332 14.804 -29.335 1.00 34.87 C
ATOM 8 O4' G B 29 -12.124 13.908 -28.216 1.00 37.40 O
ATOM 9 C3' G B 29 -11.767 16.148 -28.898 1.00 38.61 C
ATOM 10 O3' G B 29 -12.541 17.191 -29.471 1.00 34.00 O
ATOM 11 C2' G B 29 -11.941 16.122 -27.384 1.00 32.82 C
ATOM 12 O2' G B 29 -13.234 16.541 -27.006 1.00 34.12 O
ATOM 13 C1' G B 29 -11.792 14.643 -27.051 1.00 36.02 C
ATOM 14 N9 G B 29 -10.468 14.210 -26.609 1.00 33.28 N
ATOM 15 C8 G B 29 -9.427 13.786 -27.398 1.00 36.17 C
ATOM 16 N7 G B 29 -8.368 13.439 -26.719 1.00 34.26 N
ATOM 17 C5 G B 29 -8.731 13.639 -25.395 1.00 30.90 C
ATOM 18 C6 G B 29 -7.991 13.431 -24.207 1.00 29.22 C
ATOM 19 O6 G B 29 -6.828 13.018 -24.088 1.00 28.08 O
ATOM 20 N1 G B 29 -8.738 13.758 -23.077 1.00 29.58 N
ATOM 21 C2 G B 29 -10.031 14.226 -23.095 1.00 30.57 C
ATOM 22 N2 G B 29 -10.589 14.488 -21.905 1.00 26.90 N
ATOM 23 N3 G B 29 -10.734 14.425 -24.203 1.00 32.48 N
ATOM 24 C4 G B 29 -10.022 14.111 -25.311 1.00 31.64 C
ATOM 25 P A B 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 26 OP1 A B 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 27 OP2 A B 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 28 O5' A B 30 -11.176 19.119 -28.671 1.00 31.91 O
TER
Atoms:
OP1: (-12.821,18.338,-13.531)
OP2: (-14.802,18.369,-15.160)
C3': (-10.570,18.837,-17.995)
C1': (-11.357,17.070,-19.364)
C5': (-11.132,17.538,-15.861)
O6: (-16.947,17.189,-21.559)
O4': (-11.182,16.551,-18.059)
C8: (-13.742,17.738,-18.761)
C2: (-13.797,16.131,-22.830)
C6: (-15.727,16.971,-21.568)
C5: (-14.779,17.210,-20.542)
C4: (-13.458,16.888,-20.768)
P: (-13.480,17.839,-14.753)
C4': (-10.486,17.520,-17.233)
C2': (-10.542,18.355,-19.437)
O2': (-9.227,18.046,-19.846)
N1: (-15.135,16.419,-22.701)
N2: (-13.409,15.601,-24.001)
N3: (-12.899,16.350,-21.878)
N7: (-14.945,17.747,-19.269)
N9: (-12.788,17.231,-19.616)
O5': (-12.461,18.019,-15.969)
O3': (-9.433,19.650,-17.719)
OP2: (-14.802,18.369,-15.160)
C3': (-10.570,18.837,-17.995)
C1': (-11.357,17.070,-19.364)
C5': (-11.132,17.538,-15.861)
O6: (-16.947,17.189,-21.559)
O4': (-11.182,16.551,-18.059)
C8: (-13.742,17.738,-18.761)
C2: (-13.797,16.131,-22.830)
C6: (-15.727,16.971,-21.568)
C5: (-14.779,17.210,-20.542)
C4: (-13.458,16.888,-20.768)
P: (-13.480,17.839,-14.753)
C4': (-10.486,17.520,-17.233)
C2': (-10.542,18.355,-19.437)
O2': (-9.227,18.046,-19.846)
N1: (-15.135,16.419,-22.701)
N2: (-13.409,15.601,-24.001)
N3: (-12.899,16.350,-21.878)
N7: (-14.945,17.747,-19.269)
N9: (-12.788,17.231,-19.616)
O5': (-12.461,18.019,-15.969)
O3': (-9.433,19.650,-17.719)
OP1: (-9.667,13.855,-32.782)
OP2: (-7.933,13.451,-30.942)
C3': (-11.767,16.148,-28.898)
C1': (-11.792,14.643,-27.051)
C5': (-11.672,14.215,-30.566)
O6: (-6.828,13.018,-24.088)
O4': (-12.124,13.908,-28.216)
C8: (-9.427,13.786,-27.398)
C2: (-10.031,14.226,-23.095)
C6: (-7.991,13.431,-24.207)
C5: (-8.731,13.639,-25.395)
C4: (-10.022,14.111,-25.311)
P: (-9.333,13.395,-31.416)
C4': (-12.332,14.804,-29.335)
C2': (-11.941,16.122,-27.384)
O2': (-13.234,16.541,-27.006)
N1: (-8.738,13.758,-23.077)
N2: (-10.589,14.488,-21.905)
N3: (-10.734,14.425,-24.203)
N7: (-8.368,13.439,-26.719)
N9: (-10.468,14.210,-26.609)
O5': (-10.265,14.181,-30.386)
O3': (-12.541,17.191,-29.471)
OP2: (-7.933,13.451,-30.942)
C3': (-11.767,16.148,-28.898)
C1': (-11.792,14.643,-27.051)
C5': (-11.672,14.215,-30.566)
O6: (-6.828,13.018,-24.088)
O4': (-12.124,13.908,-28.216)
C8: (-9.427,13.786,-27.398)
C2: (-10.031,14.226,-23.095)
C6: (-7.991,13.431,-24.207)
C5: (-8.731,13.639,-25.395)
C4: (-10.022,14.111,-25.311)
P: (-9.333,13.395,-31.416)
C4': (-12.332,14.804,-29.335)
C2': (-11.941,16.122,-27.384)
O2': (-13.234,16.541,-27.006)
N1: (-8.738,13.758,-23.077)
N2: (-10.589,14.488,-21.905)
N3: (-10.734,14.425,-24.203)
N7: (-8.368,13.439,-26.719)
N9: (-10.468,14.210,-26.609)
O5': (-10.265,14.181,-30.386)
O3': (-12.541,17.191,-29.471)
Image (generated by PyMOL):